TCONS_00066719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066719
Unique NameTCONS_00066719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066719 ID=TCONS_00066719|Name=TCONS_00066719|organism=Clytia hemisphaerica|type=transcript|length=2273bp
ACCAACTCTAAACTTTGATTTCATAAAATCTGCACTGCTGAAGTGATTGA
TCGGAAATTTGCAGTGTTGTTGCGTACTAATTCAGGAGAATGTTAGCAAG
CGTGCCAGTTTAGACAATTTAGAATTTTTCTCTAGCTTCAAAGTCACATG
TCAGCAAATCAATCCTGTCCTCCAACTGGCCTACTAACTCTAAACTTTGA
TTTCATAAAATCTGCACTGCTGAAGTGATTGATCAATTTCTATCAAAAGA
AAATGTCTTGGAAATAAGTGTCAGTGTAATAAAGTGTATTTTACTAAACT
GTCGAAAGGTAAATCATCAAGTTTTCTAtccaatttcataaaaataaacG
TCTTTAGAAATAGAAAGACAAGAGCAGAAATATTAGAGAATTTCTTACCG
AATTCAATCGATTCAAGTGTTGTTGACGGTTAAAAGTGAGGTGGTCGATG
TTAAATCTTGTAGTATTTTCACTGTTTGTGAACGATGATGGTTTGGagcc
aatttttgtttttgcggCCTTCTCGTCAAAAGTTCTGGTCTGAATGAAAA
GGAACTGGAACCGAACAACCTGCTTCTTCGTGAGGCGGATGTGGCGGAGG
GGCGGAGGGGCGGACGGATGTTTTGTATTCATATAGGAACGCAAACTTCT
AATTTTTATAGACACGATGGTAATGCTTTACGCACGCCTCGCATGAAAAG
TATAAGCAAAAGTTTCGACTCCTTATAGGTAAGcaagttaaaaataaaaa
caaactttctcGAAAAGTTCATTGAAAGTTCAAAAAGTCCAttttacaaa
caaaaattaCAACCATGAGACAATAGCTTTAACCTtgccaaagaaaacaa
aaatatggaGGAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACA
ATTTGAAAAGAAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATA
TCAACTAGAAGAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAA
CACTGATAATGATGAGGAGAATGAAGAGaAAGCACTTCAATATCAGAAAC
TAGCTGATGAACATTTTATGCTTGGCAATCATGATACTGCATCTTCATAT
TATTCTGCACTGCTAGACAGAGACTTTCGTAAATCTTTTAATAACAATCA
AGCTGAAATTGACCTGAATAATAATGATGTGTTcacaaatgaagaagaaa
aggatAGaagtTGGGCAATAGAATATTTGgatttgaaaatcattgaagTA
AATGAGAAAATATCTATCTCACCTACTGATCCTGAAGGCTACCTAGAAAA
AGCTGCTGTCTTCTTTTTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTC
TTGATGCCGGATTGCTGAAATGCACCAAAAAAGCCCTAATAAAAACGACA
TTGGGCAATTTGAACAAACTGGAAAAGGCATacgaaaaatattgcaaatg
aTATGTTAATGTCGAGATTATCTTGAGATATTGTTGATATATTCAAATAT
TGTGATAATGAACTTCTTTTATGGGCTTCATTACATTGTATACGCTAGTA
AAGTGCTAACTAGCACGTGCATGCTAAGACATTCTTTTTGAGAAACATGG
AATGTAAACAAAGTTCAGAGTTAGTTAGTGTCCGAAAAGGTGAAAccaat
ttgacaaaaattaaaatcactGAATCGTTGAAAGAGACTCTTTGTCCAAA
TCAATAGATAATTCAAGGCAATCCAACACATGTTTTGAGTAAGTGTTGCC
TAAATTTTTCTTATCACAATTCTGCTGTTTTATTGGTCACGCTGAAATTG
ATTTTAAGTAAATATTGTGAATTTGAAATTCTTCTTAcgttcaatttcaa
tttctgtgTTTTCTCAAAATGTGTAAATTGAAGGGTAACTAATTTTTACC
GGAAGATATTTTTATGAAGATATGTGTGGTATATGAAAGTTATTAGCTTT
CAAATCTTTTAGGgtttaataattttatttttttaagtttttgtttgTGG
TTTAGTTAAATATGAATTCGGAATTCAGTTGGTAAtattatcatattttt
tttaataatcttgaaaatatttattttatgatttctGTAGTTAGTTTCGA
ATATAAGATGTGTAAATAAGGATAACGGTttagtttttttgtttcatata
tatttttacgatttttatttcaaattttctatccgGTATTATCTTTTCTA
AAATGCAGATTCTTTTCTAATAATgatgagatttttttcattttcaaaaa
cattataatATTTAGCGGTGACG
Run BLAST on NCBI

protein sequence of TCONS_00066719-protein

>TCONS_00066719-protein ID=TCONS_00066719-protein|Name=TCONS_00066719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MEEVALETTTEAKTDNLKRRHSHQPQKRKYRISTRRGRRKTCPEIFSPNT
DNDEENEEKALQYQKLADEHFMLGNHDTASSYYSALLDRDFRKSFNNNQA
EIDLNNNDVFTNEEEKDRSWAIEYLDLKIIEVNEKISISPTDPEGYLEKA
AVFFFRDRWQEAREVLDAGLLKCTKKALIKTTLGNLNKLEKAYEKYCK
Run BLAST on NCBI

transcript from alignment at scaffold_459:29811..35707+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066719 ID=TCONS_00066719|Name=TCONS_00066719|organism=Clytia hemisphaerica|type=transcript|length=5897bp|location=Sequence derived from alignment at scaffold_459:29811..35707+ (Clytia hemisphaerica)
ACCAACTCTAAACTTTGATTTCATAAAATCTGCACTGCTGAAGTGATTGA TCGGAAATTTGCAGTGTTGTTGCGTACTAATTCAGGAGAATGTTAGCAAG CGTGCCAGTTTAGACAATTTAGAATTTTTCTCTAGCTTCAAAGTCACATG TCAGCAAATCAATCCTGTCCTCCAACTGGCCTACTAACTCTAAACTTTGA TTTCATAAAATCTGCACTGCTGAAGTGATTGATCAATTTCTATCAAAAGA AAATGTCTTGGAAATAAGTGTCAGTGTAATAAAGTGTATTTTACTAAACT GTCGAAAGGTAAATCATCAAGTTTTCTAtccaatttcataaaaataaacG TCTTTAGAAATAGAAAGACAAGAGCAGAAATATTAGAGAATTTCTTACCG AATTCAATCGATTCAAGTGTTGTTGACGGTTAAAAGTGAGGTGGTCGATG TTAAATCTTGTAGTATTTTCACTGTTTGTGAACGATGATGGTTTGGagcc aatttttgtttttgcggCCTTCTCGTCAAAAGTTCTGGTCTGAATGAAAA GGAACTGGAACCGAACAACCTGCTTCTTCGTGAGGCGGATGTGGCGGAGG GGCGGAGGGGCGGACGGATGTTTTGTATTCATATAGGAACGCAAACTTCT AATTTTTATAGACACGATGGTAATGCTTTACGCACGCCTCGCATGAAAAG TATAAGCAAAAGTTTCGACTCCTTATAGGTAAGcaagttaaaaataaaaa caaactttctcGAAAAGTTCATTGAAAGTTCAAAAAGTCCAttttacaaa caaaaattaCAACCATGAGACAATAGCTTTAACCTtgccaaagaaaacaa aaatatggaGGAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACA ATTTGAAAAGAAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATA TCAACTAGAAGAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAA CACTGATAATGATGAGGAGAATGAAGAGGTAGGTACATTGTGATACTTTT CTATATCTTTAAAAGcactaccgtgagatcgggtaacttgcatcagtgga ggataACATGCatgatgcatagccctcaaataaatgaacTGGCTGGTCAT CATTaagatacaaaattaaatcaaaacaaaaatggtagagtagagctgcg agcagagctgcgtagttgtattttaaacTATGGAATAGCTTGGACAAAGG AATTGtaaatttaaaagaaagggATGAATTTAGAAACTCTTTGACTATTA AATAAGTATTATAATCATATATACACTTTTCAATTACTAAGACAAAACAC TTAAGCTTCTGTCTAATTTCCTAATTTCCAGTCATGtctataatagacct tttttcaaagaggcaaccctgttgaataattatgtagtccagccatacaa acaatgatacaacaatgcataattactgtttcatgcatattgtaataatt atgcatgggtgtatcattgtttttctgccggactacataattattcaaca gggtggcctctttaaaaaaaggtctatctacCTCGCAacaaacttttgca aatttttgccttcgTTAAATTCCTAACTACTGTTAGTTTTTCTGGAAATA CTATTTTTAACTTACTATTTAAACttatttatcaattatttattatttac tattttaatattttaaccattatgtacattttaaataaacttaatttgat agacttaaattttttattttcctaaaaattttttgttaaaatatttgcga aagtaattctaatgaatttatgcaaataattatatagaaatagaaataga aatagaaacttaatgaccagccaggtcatttatttgatggctatgcatgt tagccttcactgatacaagttacccgatctcacggtacgaAGGTAtttga aaatcataaaagtcaattttataCAATTTTCATAGCTATTAAAAAACATA ACAATAGACAATAGAGAATAGGgcggctattccatttttaaaccatacag aggtattgacaaacttttccaggggggggggggcggctgggccttgattt tccaaggggttttgattcatttttcagattttccaagggggttattaaag gtttccagggggttctcATATTAAACTGACATCAATAGTCATTTTCcagg ccctttttcacaaaattttacttTCCAAGATGAGGCTGAGGGGTGTCTCA ACCCCTATAGGGGAAATGTATTTTGACTATTGAGTCACAATACACTCTTG ACCGTAACTGGTAGTGACCCAACCCAATCAATACCCCTAGAATCACAGAA TGACAAACATGAAAAGTTGGAAACAATTGTTCATCACGCTCTGAGCATAG ACTTTTTGATGTCATTTATATGTAAGCAGTCATTTTTCTTACAAATCATA CCAtagattgaaaaaagataaaccattttgaaaatgatgccATTTATATG CTAAACTATCAGTCAGTACTTTTAGCCaattaagaagaaaaatattccta aatagaaagaaatatttaaaagtgtAGTATGTATCTCTCCAACAATCTAC ATTCACAAATTCCAAGTATGACCAATAGATTCCATATCCCAAATGAGata actgtgcaaaaaattggaaactttTATTCGCGGATGGTGGAATTATGAAT GccccaaaaaaataattccaaattacCGTATGAATTTTCTATCTGTAAGG CCTCACTTACACCTAAATATCTTTTTCAAGTAACATATAGAAagggctta aaaaacgcataaTTCACATGCGTTTTCCAGCGGAATAAGTAAAGTTTTTT CTACGAATTATAGCTCGGTCCCCCGAGCAATTCAAGAGCTCAATCTTTCT TTCCCATCTAAATGGAATGGTAAGAATCTTATGAAGTACTTTTTAATGtg caattttttctatttttggagaaaatctagGTATATTTATATCTATATAT CTAGGTATTATTAAATCTAGGTATATTCCTAAGGAATATTGGTAAAAGTA AGAGATATAttcctaatttggctaaaggtacTGGCTGACTATGCAAATCT GTTTCAGCAATCTATGATTTGTACGAAAAATGGCTGCTTGACATCAAtgg caaaaaggtctattttagcGAAATCTGGTAAAGCCAACCCCAGATTTGAG GGGGTTTCACAGAGAGGAATCATCCCTTTTTAAATGGATTGACAGAATTT GATGTAAATTTCAACAGAATTTTGGAAATTGGGTCCTCTGTCGTACAGTA GaaagaaaattcacaaaaaatatACCTTTTTGAAATATACATTTATATAC ATTCCAGTAttgaacttctttttttttaatttctagaAAGCACTTCAATA TCAGAAACTAGCTGATGAACATTTTATGCTTGGCAATCATGATACTGCAT CTTCATATTATTCTGCACTGCTAGACAGAGACTTTCGTAAATCTTTTAAT AACAATCAAGCTGAAATTGACCTGAATAATAATGATGTGTTcacaaatga agaagaaaaggatAGGTTGGAACTTTATTCATGGTTTAACTACTCTAATA GGTCCTGAATAAACATCTCCCCTCTGCTCCCCTTGGTTATTGATTTTTTG GAGCCCGTTCTTATTAGGGccgttgtttatttatttttgaaaatattttc agctatttTTCTACATAGCCTGGTTTTAGTCTATGACTACCTTATTTGGg agttttaaatttcaattccCAGACAATAAGGTCCCCTCTGACCCCTACTA TTTGAGACCTTAGAGTactctttttattttatacatTGTGGTTTCTTTCA TGGTAATTAGGTGAACAATTTTTCTTCTGTGATGGAACTATTATgacttt tgaatttcaatttggttgttttatatgtttttttttgttcatatataaaa tgaaaccaaattaaatttaaattgctAAATGTGTAAtaatatgttttctt ttttagaagtTGGGCAATAGAATATTTGgatttgaaaatcattgaagTAA ATGAGGTAtagtaattttttaaatctgtATTATTAAAGTTtagctttctt cttttcaaaactgaaaagttcttgacattttatttttcttataatccCAT TTAAACttgtaaactttttttaatcacTTGGTATAACTACAAAATATGAT TCATACACGAACTACCACCAAAAGACAAATATGATCATTTTaactttcct ttcttttttgcttatttctGCAGAAAATATCTATCTCACCTACTGATCCT GAAGGCTACCTAGAAAAAGCTGCTGTCTTCTTTTTCCGAGATAGATGGCA GGAAGCAAGGTatcaaaattattattttctttttcttttttgtaaataCA TCCCTtgtgtattttaaaatttaaaatgaccTGGTTgtgatttttgttta ttatacTCTTACGagtttctaaatttgaaaaaaacagtGAACATTCATTT TTTGTGTTTCTTTGTACACATGAATGATTGATCTTTCTTCATTGATATTT TTTAGAGAGGTTCTTGATGCCGGATTGCTGAAATGCACCAAAAAAGCCCT AATAAAGTAAGTTAGaactagtttagacggccgactttctgccctgccta ttctaattattAAAGTAAGCAGAAAGTGGGcacagttaaaatctttgcgt gaaaaagattgaaagaagacattgcattgacgtcaaaagagggcaatgca ttgactttagacagcccactttatgcccactttaattcacaattagaata gccAGGGCGAAAAgggggccgtctaaactagagcttagttATACCTTATG AAATGGTCGCTACCAGTTTCGAGTcaagattttattttccttAACACCAT TCTAAGATAAACCCAATGgattaaaaaatcattgaattcgACTCTTTCAG TTTTTGGTTTCACAAAATACCAAATCAAAAGGAATGACAACTAATTACTT GATTTCGCTTTATTCAGAACGACATTGGGCAATTTGAACAAACTGGAAAA GGCATacgaaaaatattgcaaatgaTATGTTAATGTCGAGATTATCTTGA GATATTGTTGATATATTCAAATATTGTGATAATGAACTTCTTTTATGGGC TTCATTACATTGTATACGCTAGTAAAGTGCTAACTAGCACGTGCATGCTA AGACATTCTTTTTGAGAAACATGGAATGTAAACAAAGTTCAGAGTTAGTT AGTGTCCGAAAAGGTGAAAccaatttgacaaaaattaaaatcactGAATC GTTGAAAGAGACTCTTTGTCCAAATCAATAGATAATTCAAGGCAATCCAA CACATGTTTTGAGTAAGTGTTGCCTAAATTTTTCTTATCACAATTCTGCT GTTTTATTGGTCACGCTGAAATTGATTTTAAGTAAATATTGTGAATTTGA AATTCTTCTTAcgttcaatttcaatttctgtgTTTTCTCAAAATGTGTAA ATTGAAGGGTAACTAATTTTTACCGGAAGATATTTTTATGAAGATATGTG TGGTATATGAAAGTTATTAGCTTTCAAATCTTTTAGGgtttaataatttt atttttttaagtttttgtttgTGGTTTAGTTAAATATGAATTCGGAATTC AGTTGGTAAtattatcatattttttttaataatcttgaaaatatttattt tatgatttctGTAGTTAGTTTCGAATATAAGATGTGTAAATAAGGATAAC GGTttagtttttttgtttcatatatatttttacgatttttatttcaaatt ttctatccgGTATTATCTTTTCTAAAATGCAGATTCTTTTCTAATAATga tgagatttttttcattttcaaaaacattataatATTTAGCGGTGACG

Coding sequence (CDS) from alignment at scaffold_459:29811..35707+

>TCONS_00066719 ID=TCONS_00066719|Name=TCONS_00066719|organism=Clytia hemisphaerica|type=CDS|length=3582bp|location=Sequence derived from alignment at scaffold_459:29811..35707+ (Clytia hemisphaerica)
atggaGGAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACAATTT
GAAAAGAAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATATCAA
CTAGAAGAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAACACT
GATAATGATGAGGAGAATGAAGAGaAAGCACTTCAATATCAGAAACTAGC
TGATGAACATTTTATGCTTGGCAATCATGATACTGCATCTTCATATTATT
CTGCACTGCTAGACAGAGACTTTCGTAAATCTTTTAATAACAATCAAGCT
GAAATTGACCTGAATAATAATGATGTGTTcacaaatgaagaagaaaagga
tAGaagtTGGGCAATAGAATATTTGgatttgaaaatcattgaagTAAATG
AGAAAATATCTATCTCACCTACTGATCCTGAAGGCTACCTAGAAAAAGCT
GCTGTCTTCTTTTTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGA
TGCCGGATTGCTGAAATGCACCAAAAAAGCCCTAATAAAAACGACATTGG
GCAATTTGAACAAACTGGAAAAGGCATacgaaaaatattgcaaatgaatg
gaGGAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACAATTTGAA
AAGAAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATATCAACTA
GAAGAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAACACTGAT
AATGATGAGGAGAATGAAGAGaAAGCACTTCAATATCAGAAACTAGCTGA
TGAACATTTTATGCTTGGCAATCATGATACTGCATCTTCATATTATTCTG
CACTGCTAGACAGAGACTTTCGTAAATCTTTTAATAACAATCAAGCTGAA
ATTGACCTGAATAATAATGATGTGTTcacaaatgaagaagaaaaggatAG
aagtTGGGCAATAGAATATTTGgatttgaaaatcattgaagTAAATGAGA
AAATATCTATCTCACCTACTGATCCTGAAGGCTACCTAGAAAAAGCTGCT
GTCTTCTTTTTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGATGC
CGGATTGCTGAAATGCACCAAAAAAGCCCTAATAAAAACGACATTGGGCA
ATTTGAACAAACTGGAAAAGGCATacgaaaaatattgcaaatgaatggaG
GAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACAATTTGAAAAG
AAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATATCAACTAGAA
GAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAACACTGATAAT
GATGAGGAGAATGAAGAGaAAGCACTTCAATATCAGAAACTAGCTGATGA
ACATTTTATGCTTGGCAATCATGATACTGCATCTTCATATTATTCTGCAC
TGCTAGACAGAGACTTTCGTAAATCTTTTAATAACAATCAAGCTGAAATT
GACCTGAATAATAATGATGTGTTcacaaatgaagaagaaaaggatAGaag
tTGGGCAATAGAATATTTGgatttgaaaatcattgaagTAAATGAGAAAA
TATCTATCTCACCTACTGATCCTGAAGGCTACCTAGAAAAAGCTGCTGTC
TTCTTTTTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGATGCCGG
ATTGCTGAAATGCACCAAAAAAGCCCTAATAAAAACGACATTGGGCAATT
TGAACAAACTGGAAAAGGCATacgaaaaatattgcaaatgaatggaGGAA
GTTGCACTTGAGACTACTACAGAAGCGAAAACAGACAATTTGAAAAGAAG
ACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATATCAACTAGAAGAG
GACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAACACTGATAATGAT
GAGGAGAATGAAGAGaAAGCACTTCAATATCAGAAACTAGCTGATGAACA
TTTTATGCTTGGCAATCATGATACTGCATCTTCATATTATTCTGCACTGC
TAGACAGAGACTTTCGTAAATCTTTTAATAACAATCAAGCTGAAATTGAC
CTGAATAATAATGATGTGTTcacaaatgaagaagaaaaggatAGaagtTG
GGCAATAGAATATTTGgatttgaaaatcattgaagTAAATGAGAAAATAT
CTATCTCACCTACTGATCCTGAAGGCTACCTAGAAAAAGCTGCTGTCTTC
TTTTTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGATGCCGGATT
GCTGAAATGCACCAAAAAAGCCCTAATAAAAACGACATTGGGCAATTTGA
ACAAACTGGAAAAGGCATacgaaaaatattgcaaatgaatggaGGAAGTT
GCACTTGAGACTACTACAGAAGCGAAAACAGACAATTTGAAAAGAAGACA
TAGTCATCAGCCTCAGAAAAGAAAGTATCGTATATCAACTAGAAGAGGAC
GAAGAAAAACTTGTCCAGAAATATTTTCACCAAACACTGATAATGATGAG
GAGAATGAAGAGaAAGCACTTCAATATCAGAAACTAGCTGATGAACATTT
TATGCTTGGCAATCATGATACTGCATCTTCATATTATTCTGCACTGCTAG
ACAGAGACTTTCGTAAATCTTTTAATAACAATCAAGCTGAAATTGACCTG
AATAATAATGATGTGTTcacaaatgaagaagaaaaggatAGaagtTGGGC
AATAGAATATTTGgatttgaaaatcattgaagTAAATGAGAAAATATCTA
TCTCACCTACTGATCCTGAAGGCTACCTAGAAAAAGCTGCTGTCTTCTTT
TTCCGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGATGCCGGATTGCT
GAAATGCACCAAAAAAGCCCTAATAAAAACGACATTGGGCAATTTGAACA
AACTGGAAAAGGCATacgaaaaatattgcaaatgaatggaGGAAGTTGCA
CTTGAGACTACTACAGAAGCGAAAACAGACAATTTGAAAAGAAGACATAG
TCATCAGCCTCAGAAAAGAAAGTATCGTATATCAACTAGAAGAGGACGAA
GAAAAACTTGTCCAGAAATATTTTCACCAAACACTGATAATGATGAGGAG
AATGAAGAGaAAGCACTTCAATATCAGAAACTAGCTGATGAACATTTTAT
GCTTGGCAATCATGATACTGCATCTTCATATTATTCTGCACTGCTAGACA
GAGACTTTCGTAAATCTTTTAATAACAATCAAGCTGAAATTGACCTGAAT
AATAATGATGTGTTcacaaatgaagaagaaaaggatAGaagtTGGGCAAT
AGAATATTTGgatttgaaaatcattgaagTAAATGAGAAAATATCTATCT
CACCTACTGATCCTGAAGGCTACCTAGAAAAAGCTGCTGTCTTCTTTTTC
CGAGATAGATGGCAGGAAGCAAGAGAGGTTCTTGATGCCGGATTGCTGAA
ATGCACCAAAAAAGCCCTAATAAAAACGACATTGGGCAATTTGAACAAAC
TGGAAAAGGCATacgaaaaatattgcaaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041725XLOC_041725Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066719-proteinTCONS_00066719-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066719-exon-scaffold_459-1491911889:29811..30838TCONS_00066719-exon-scaffold_459-1491911889:29811..30838Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:29811..30838TCONS_00066719-exon-scaffold_459-1510915933:29811..30838Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:29811..30838TCONS_00066719-exon-scaffold_459-1575043694:29811..30838Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1491911889:33197..33375TCONS_00066719-exon-scaffold_459-1491911889:33197..33375Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:33197..33375TCONS_00066719-exon-scaffold_459-1510915933:33197..33375Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:33197..33375TCONS_00066719-exon-scaffold_459-1575043694:33197..33375Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1491911889:33817..33865TCONS_00066719-exon-scaffold_459-1491911889:33817..33865Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:33817..33865TCONS_00066719-exon-scaffold_459-1510915933:33817..33865Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:33817..33865TCONS_00066719-exon-scaffold_459-1575043694:33817..33865Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1491911889:34084..34169TCONS_00066719-exon-scaffold_459-1491911889:34084..34169Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:34084..34169TCONS_00066719-exon-scaffold_459-1510915933:34084..34169Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:34084..34169TCONS_00066719-exon-scaffold_459-1575043694:34084..34169Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1491911889:34366..34416TCONS_00066719-exon-scaffold_459-1491911889:34366..34416Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:34366..34416TCONS_00066719-exon-scaffold_459-1510915933:34366..34416Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:34366..34416TCONS_00066719-exon-scaffold_459-1575043694:34366..34416Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1491911889:34828..35707TCONS_00066719-exon-scaffold_459-1491911889:34828..35707Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1510915933:34828..35707TCONS_00066719-exon-scaffold_459-1510915933:34828..35707Clytia hemisphaericaexon
TCONS_00066719-exon-scaffold_459-1575043694:34828..35707TCONS_00066719-exon-scaffold_459-1575043694:34828..35707Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:29811..35707 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.1464 13.7615 13.7013 12.643 14.5339 13.5914 15.6461 16.1993 25.1165 22.2117 21.7334 18.9802 12.8379 12.0026 13.3717 16.2563 16.9553 21.2406 6.57796 8.27915 17.9985 17.5338 23.6895 23.8486 13.2506 13.9011 25.1013 19.5445 17.5711 17.2801
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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