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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066705 ID=TCONS_00066705|Name=TCONS_00066705|organism=Clytia hemisphaerica|type=transcript|length=715bp
GTTGAACAACCATTAAAAGAGTGCTCAATACTCTTTGTAGAGCAAATTca
ataaagttttcaaaaatcaccatGTAGATTCTGAAACTTTTAGTAATGTA
TTTTACatggtgattttttaaatataacttTATTAAAAGTTCAGCTAGTT
TTAGCCATAATGATATATCTCCATTTAGCCAATGAGACAGAGACGTACTG
GAAAAACACCTACCTGGTTAGAAGTACCAAAGGCTGGTCTAGCTGGACTC
GATACTTGAGCTTTGTTTCTGATCTTTGTATTTTTGGAAGTAACCCTTTG
TCCAGATTTCCCAGTCTTACGAGATTCTGTATTCACTGGATGGACATCGG
ATAAATCACCATGGGAACCAGTATGTGATTTCTTCTTATCGTTATCATTA
TTGGCGAATGCTTTGTCGGCTTCGGCTGTGTTGACCAGTAGTTCGTGGAT
CTTCTTGATGTCATTACCAATATCCTCTATATGAAGACCTTTGAAAAGGA
TTTCAACTTGCTGTAATGTTTTTTCAAACATGCTTGTTTCATGCTCGTGC
TCTTTGAGACGATATTGTTCCAACATTTTCTTGtgactttgtttttgttt
cttctcttctttttcATCCTCATCTTCTTGCTGGTCATCATTTGGTGAtt
gtttggtgacgtcatcgTTGTCAAGGTTACCAGGCATCTGCTTTTTCGGC
TTCTTATTGGTACCT Run BLAST on NCBI transcript from alignment at scaffold_458:184565..185925- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066705 ID=TCONS_00066705|Name=TCONS_00066705|organism=Clytia hemisphaerica|type=transcript|length=1361bp|location=Sequence derived from alignment at scaffold_458:184565..185925- (Clytia hemisphaerica)
GTTGAACAACCATTAAAAGAGTGCTCAATACTCTTTGTAGAGCAAATTCA
ATAAAGTTTTCAAAAATCACCATGTAGATTCTGAAACTTTTAGTAATGTA
TTTTACATGGTGATTTTTTAAATATAACTTTATTAAAAGTTCAGCTAGTT
TTAGCCATAATGATATATCTCCATTTAGCCAATGAGACAGAGACGTACTG
GAAAAACACCTACCTGGTTAGAAGTACCAAAGGCTGGTCTAGCTGGACTC
GATACTTGAGCTTTGTTTCTGATCTTTGTATTTTTGGAAGTAACCCTTTG
TCCAGATTTCCCAGTCTTACGAGATTCTGTATTCACTGGATGGACATCGG
ATAAATCACCATGGGAACCAGTATGTGATTTCTTCTTATCGTTATCATTA
TTGGCGAATGCTTTGTCGGCTTCGGCTGTGTTGACCAGTAGTTCGTGGAT
CTTCTTGATGTCATTACCAATATCCTCTATATGAAGACCTTTGAAAAGTG
ATAGAGAATCACCTATTTAATTAGACTGGAGTCGTTTATAATGCGTGTAA
TACAGTAGTATAGGCGTTATATGATATTTCGATTATTGTTACGGCATTTA
GTTTGAATAAAATCTGTTCCCTCTATCAGCATTACTAGTTTACGAGGCAG
ATAGTTTTATGGGACAGNCATGTTATATCAAAAAATATATTATCATTGGT
AAAGTTGTAAAGTCAATGGGACAAGCTGGAGTTTTTACAAGCTCTTTCTT
GATTTGGTTGGTCGTTAACCAGTAATACAACAATTTTATTACTTTTTCTA
AAGAATGCGTCATTTTTATTACTTCAAATGACCAATTACTGAAGTATCTT
ATAAAAACTCCAGAACATCTCAGTTTTATGCCTTACTTTGCAATGGGATA
AACTTTCGCAGGGATTAAATTTCGCGGATTTCGCGGATTTGGTTGTCATT
CGCGAAAATCCGCGAAATTAAGTCCCAATGGAAATTTGGAACGGCCTCAT
CCGCGAAATATTTCTAAACAAAACTCAAAATATGTCAAATAAATACTATT
TCAATGGTTACTTGCATCAAGAAGCGCAATTAATGCGTACGGTAATTATG
ATAAAATGGACTTTCAGATCATTAGTGTTAGTACCTTTGAAAGGGATTTC
AACTTGCTGTAATGTTTTTTCAAACATGCTTGTTTCATGCTCGTGCTCTT
TGAGACGATATTGTTCCAACATTTTCTTGTGACTTTGTTTTTGTTTCTTC
TCTTCTTTTTCATCCTCATCTTCTTGCTGGTCATCATTTGGTGATTGTTT
GGTGACGTCATCGTTGTCAAGGTTACCAGGCATCTGCTTTTTCGGCTTCT
TATTGGTACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066705-exon-scaffold_458-1575043694:185429..185925 | TCONS_00066705-exon-scaffold_458-1575043694:185429..185925 | Clytia hemisphaerica | exon |
| TCONS_00066705-exon-scaffold_458-1575043694:184565..184782 | TCONS_00066705-exon-scaffold_458-1575043694:184565..184782 | Clytia hemisphaerica | exon |
| TCONS_00066705-exon-scaffold_458-1510915933:185429..185925 | TCONS_00066705-exon-scaffold_458-1510915933:185429..185925 | Clytia hemisphaerica | exon |
| TCONS_00066705-exon-scaffold_458-1510915933:184565..184782 | TCONS_00066705-exon-scaffold_458-1510915933:184565..184782 | Clytia hemisphaerica | exon |
| TCONS_00066705-exon-scaffold_458-1491911889:185429..185925 | TCONS_00066705-exon-scaffold_458-1491911889:185429..185925 | Clytia hemisphaerica | exon |
| TCONS_00066705-exon-scaffold_458-1491911889:184565..184782 | TCONS_00066705-exon-scaffold_458-1491911889:184565..184782 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_458 | supercontig | scaffold_458:184565..185925 - |
Blast
The following BLAST results are available for this feature:
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