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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066663 ID=TCONS_00066663|Name=TCONS_00066663|organism=Clytia hemisphaerica|type=transcript|length=1382bp
CGAAAGGACAGcactaaaatttcaaagtacTCCATACCATTACAGTTAGG
TTGTGATTCCATTTAAGATACTGGATGACTAAGTCATTTTGTGAAGCCCT
TTGCTCTGTCAACTCCTATAGCGAAAATAATTTCACTTATCaagtatttc
caaaaaaaacctgttttagcATTTAGTCACAAAACATTTGGCTGCAAATT
GGAGCAGTGAACCTGCCAGTCAGACTTGTCTTCTTATCCCTTATTATAAA
GTTTCAACCCATGTCCCAAAAGGATAGACACTTCCGATAGTAGTCAACGA
ATATCGATCAATCAAATTTGACACAACACTATAAAATgattaatttcaaa
acattagcaaagaattgataaatttatcctGAATGTCTGGCATTGCTGGT
ACTACCCTTGCTTAAAAAGGTCAAATGTTGTAACCTCAAATGTAGGATAT
TAGTTaaatgttaagaataataaattcaggccaatgaaaattttttaaat
aaaaacctACCAGTCCCCAGAACAATGGAAAAAATGATAGTTAGAGGACA
GCCTCCTTTTTGACTTGCTGTCGTTTAAATCAATAATAAAACAAGGAGAG
TTGCAGAAAATGTTTGGGTGATTTTGGAACTGCAAAAGTTTATGACAaca
tctcaaaaatcaaaacacatgCAAAATGACACATCAATCCAGTCAAAAAT
CCACTATAACAAGCATTTAATTTGATCTTATTAAAGCAAAAGACGAAAAG
GCTACAAAGACGAAAAGCAAAAACTGGATCACTACCCTTATTCTTCAAGT
CGCGAGTAACAACACCAATTTGTCATTACAACTTTGAGAAAGCAGATACA
AATATTCAATCGTACCAGGCTTGTATATACCACGTacgtgtcaaaatcaa
aacaatcattaaATCTGACATCTTTCTCGAAGAACTTGTCCCATCATATC
AAACCCCAAAACAACTTGACAATCGTTTCATAGCTCATTGACCGGTTAAT
TTATAACaattatgaataaaaaaatacataaccATGACACTGGATAACAG
GCCCCTATCCCCAACTCTCAAAAGGCTAAATGAAGCAGCAGCACAACGAC
CGACAATCACAACTCCAGAAACGATGACAAGTGTCACTCCAGCCACAAAT
CACTCAGAATGCAGGAAAATCTTTTAAGCCTTGAACAAAATTCTAGTGCC
AGAAATTATCTTGATTCAAGACAGACACGActcctcaaaacaaaaagcaA
AGGAACAACAAAGGCCAGAAGAAGCAAAAAATCAAGTCaaagattgaatt
taaaatgcCACATATTCAGGTGAATACTGATAAACTTGCCTCAATAACTT
TACCAGCCTTTTAAGACTATCTAAATCCAGAC Run BLAST on NCBI transcript from alignment at scaffold_457:78409..79790 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066663 ID=TCONS_00066663|Name=TCONS_00066663|organism=Clytia hemisphaerica|type=transcript|length=1382bp|location=Sequence derived from alignment at scaffold_457:78409..79790 (Clytia hemisphaerica)
GTCTGGATTTAGATAGTCTTAAAAGGCTGGTAAAGTTATTGAGGCAAGTT
TATCAGTATTCACCTGAATATGTGgcattttaaattcaatctttGACTTG
ATTTTTTGCTTCTTCTGGCCTTTGTTGTTCCTTtgctttttgttttgagg
agTCGTGTCTGTCTTGAATCAAGATAATTTCTGGCACTAGAATTTTGTTC
AAGGCTTAAAAGATTTTCCTGCATTCTGAGTGATTTGTGGCTGGAGTGAC
ACTTGTCATCGTTTCTGGAGTTGTGATTGTCGGTCGTTGTGCTGCTGCTT
CATTTAGCCTTTTGAGAGTTGGGGATAGGGGCCTGTTATCCAGTGTCATg
gttatgtatttttttattcataattGTTATAAATTAACCGGTCAATGAGC
TATGAAACGATTGTCAAGTTGTTTTGGGGTTTGATATGATGGGACAAGTT
CTTCGAGAAAGATGTCAGATttaatgattgttttgattttgacacgtACG
TGGTATATACAAGCCTGGTACGATTGAATATTTGTATCTGCTTTCTCAAA
GTTGTAATGACAAATTGGTGTTGTTACTCGCGACTTGAAGAATAAGGGTA
GTGATCCAGTTTTTGCTTTTCGTCTTTGTAGCCTTTTCGTCTTTTGCTTT
AATAAGATCAAATTAAATGCTTGTTATAGTGGATTTTTGACTGGATTGAT
GTGTCATTTTGcatgtgttttgatttttgagatgtTGTCATAAACTTTTG
CAGTTCCAAAATCACCCAAACATTTTCTGCAACTCTCCTTGTTTTATTAT
TGATTTAAACGACAGCAAGTCAAAAAGGAGGCTGTCCTCTAACTATCATT
TTTTCCATTGTTCTGGGGACTGGTaggtttttatttaaaaaattttcatt
ggcctgaatttattattcttaacatttAACTAATATCCTACATTTGAGGT
TACAACATTTGACCTTTTTAAGCAAGGGTAGTACCAGCAATGCCAGACAT
TCaggataaatttatcaattctttgctaatgttttgaaattaatcATTTT
ATAGTGTTGTGTCAAATTTGATTGATCGATATTCGTTGACTACTATCGGA
AGTGTCTATCCTTTTGGGACATGGGTTGAAACTTTATAATAAGGGATAAG
AAGACAAGTCTGACTGGCAGGTTCACTGCTCCAATTTGCAGCCAAATGTT
TTGTGACTAAATgctaaaacaggttttttttggaaatacttGATAAGTGA
AATTATTTTCGCTATAGGAGTTGACAGAGCAAAGGGCTTCACAAAATGAC
TTAGTCATCCAGTATCTTAAATGGAATCACAACCTAACTGTAATGGTATG
GAgtactttgaaattttagtgCTGTCCTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066663-exon-scaffold_457-1491911889:78409..79790 | TCONS_00066663-exon-scaffold_457-1491911889:78409..79790 | Clytia hemisphaerica | exon |
| TCONS_00066663-exon-scaffold_457-1510915933:78409..79790 | TCONS_00066663-exon-scaffold_457-1510915933:78409..79790 | Clytia hemisphaerica | exon |
| TCONS_00066663-exon-scaffold_457-1575043694:78409..79790 | TCONS_00066663-exon-scaffold_457-1575043694:78409..79790 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_457 | supercontig | scaffold_457:78409..79790 . |
Blast
The following BLAST results are available for this feature:
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