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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066611 ID=TCONS_00066611|Name=TCONS_00066611|organism=Clytia hemisphaerica|type=transcript|length=1112bp
attttgagacaaataagcgtttagaaaaattttccgaaaatttaatttta
gttcggtaaaagatacaccatctaccgcaaaacaattttcaaaatgtttt
ttcttcgccgaaaataagctcttcaaagttgaaatactcttcttcacaaa
aatcttcattttcttcctcatcaatttttttcattacgattcttaaattt
tcagactcaaggataacTGGCCTTACAGAAAATGTATagcatgccacagt
tttgtgggctgcatcaagtagaaatttatattttgtacgtggTACATATT
AAAGATTCACTACaatatggtcagagcccttaattgaGCTATAAAAGATA
AAAACTGTTTCTTTTGATTATCCCCGATTAACTGGAAACAATAAATTTCT
AACTGATATGGGCTTTGGTGATTACCTACCATTACATAAATAGAATTTGA
CCGATCATCATATGTAGTGtattttctaaaattgttttttaattgcATAA
TAATCAGCATTTTAAAGATCACAGGCAACGTTGTGCAACCAAAGCAAAAC
AGCATTTTCTGACACGAGAAAACAAAGTTTTTTGCTTGTTGGATTATGTA
ATCTTAAACAGACTTTCCAAAAAATGATCGTATGCAATATTTTGATACAT
TGCTCTTAGAGAAAAAATGTATAATGACAAGTATTACCTCTTTCGAAAGA
TAATTCTGAGCgggcaatttttcaaaaaaactcatttttgataatttaaa
GCTTTGGAATTCATCCACTCAAAGATATCTATCCAACAAAGTATTGTCAC
TTTTCATTATACTGGATCTTTTTTCCATCAGGGGCAAGGTATCAAAATGC
GAGGACTGCCATCTTTTTGAAACAGACCTAGGAATTCCAGGGACAGAAAT
TTGCTTCTAttaatgagcctatgtgatgaTTGCTCGCATAGAGAATTCCA
TTATGAGGGGAGTTTCTTAAAACTAATACTTACAATTTATTAGaagtttg
ttaatattttttactgACACTGTAGGTAATTTATCATTAGGCTTTATTTT
GATTAGACCATTTCAGTTAACTGAAGGATCTAAGATACATTCTATCCTTA
TAAATGAGTAGA Run BLAST on NCBI transcript from alignment at scaffold_456:441426..442537 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066611 ID=TCONS_00066611|Name=TCONS_00066611|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at scaffold_456:441426..442537 (Clytia hemisphaerica)
TCTACTCATTTATAAGGATAGAATGTATCTTAGATCCTTCAGTTAACTGA
AATGGTCTAATCAAAATAAAGCCTAATGATAAATTACCTACAGTGTcagt
aaaaaatattaacaaacttCTAATAAATTGTAAGTATTAGTTTTAAGAAA
CTCCCCTCATAATGGAATTCTCTATGCGAGCAAtcatcacataggctcat
taaTAGAAGCAAATTTCTGTCCCTGGAATTCCTAGGTCTGTTTCAAAAAG
ATGGCAGTCCTCGCATTTTGATACCTTGCCCCTGATGGAAAAAAGATCCA
GTATAATGAAAAGTGACAATACTTTGTTGGATAGATATCTTTGAGTGGAT
GAATTCCAAAGCtttaaattatcaaaaatgagtttttttgaaaaattgcc
cGCTCAGAATTATCTTTCGAAAGAGGTAATACTTGTCATTATACATTTTT
TCTCTAAGAGCAATGTATCAAAATATTGCATACGATCATTTTTTGGAAAG
TCTGTTTAAGATTACATAATCCAACAAGCAAAAAACTTTGTTTTCTCGTG
TCAGAAAATGCTGTTTTGCTTTGGTTGCACAACGTTGCCTGTGATCTTTA
AAATGCTGATTATTATgcaattaaaaaacaattttagaaaataCACTACA
TATGATGATCGGTCAAATTCTATTTATGTAATGGTAGGTAATCACCAAAG
CCCATATCAGTTAGAAATTTATTGTTTCCAGTTAATCGGGGATAATCAAA
AGAAACAGTTTTTATCTTTTATAGCtcaattaagggctctgaccatattG
TAGTGAATCTTTAATATGTAccacgtacaaaatataaatttctacttgat
gcagcccacaaaactgtggcatgctATACATTTTCTGTAAGGCCAgttat
ccttgagtctgaaaatttaagaatcgtaatgaaaaaaattgatgaggaag
aaaatgaagatttttgtgaagaagagtatttcaactttgaagagcttatt
ttcggcgaagaaaaaacattttgaaaattgttttgcggtagatggtgtat
cttttaccgaactaaaattaaattttcggaaaatttttctaaacgcttat
ttgtctcaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066611-exon-scaffold_456-1491911889:441426..442537 | TCONS_00066611-exon-scaffold_456-1491911889:441426..442537 | Clytia hemisphaerica | exon |
| TCONS_00066611-exon-scaffold_456-1510915933:441426..442537 | TCONS_00066611-exon-scaffold_456-1510915933:441426..442537 | Clytia hemisphaerica | exon |
| TCONS_00066611-exon-scaffold_456-1575043694:441426..442537 | TCONS_00066611-exon-scaffold_456-1575043694:441426..442537 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:441426..442537 . |
Blast
The following BLAST results are available for this feature:
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