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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066605 ID=TCONS_00066605|Name=TCONS_00066605|organism=Clytia hemisphaerica|type=transcript|length=1049bp
CTCTTACTTCCCCTCTTACTCTTAGCAAACGATAAGGAAAAACCCTGTGG
ACTAGTTATTTTACAGCACAGACATGCGAGTTCCCACTTCACAGTACTCC
TTACACCTCTTAAAAGGACGTGGATAGGATAATGATAAGGAAATTTACTA
CAAGAAACAAAATCAACCTACTTTGGGATGATTGTGATAGCCAAACAAAC
ATTCTTTGAAAATTCATCAATATTAAAAACAGAAAGTTATTGataagaaa
aattcttttgaaggTTTTGACAGTATTTTTACAGAGGCATGAACAAAAAT
ATGACTTTATAAACACATGACTCtattaaaaatgagaaaaggtaGAACAT
TTAAATGTAAAACAAAGCATTTACACAAGATTATAATGTAGAGAGCTATC
AGAGGcttttcataattatataaCTGTTTAAACTTTCTATCTATATCTAA
CATCAAAATTCCAAAGGTTGAGACTTTGATACTTGGTGTAATAAGGTACA
GAAACAATGACAATTAAAAAATGTAGTTAAGtggtatttttattttaatg
tatgCTGCTATTGGGCTTACTGTAATACTTATGGGATGTCTTCTCATGAA
ATTTGTGATGACTTTCAGTGAGTTAATAAAACATGTTTAGTGTGTTtatt
tatagaaaaaataatcTGCTTTTAGAACATAACTGAAGTACTGTTTTTGC
TGTAAGGTACATAACAAGTCTTTCATGTTTACATGAATTTTATAGATGGG
ATAGCTAGTAGCTAGTATTTGTTAACCAAAATGTATCCCAACACAATGTA
CAATGATACAGTAAAGCATTATCCCAAAGAAGAGAGGCATTCTTATTATC
TTTGCTTTGTTTACACACAAAGGTTAGCAAATCTTATGGAAAAGATCCAG
TTGACAGATCAGCTGCAAATCATCTGACATGAGCAAATTAGATTTCCATT
ATGTAACAAAGAAACATTCTTTAAAACTAATTCAATATAAAGTTGTTTAA
TTGTCCTTCATCAAAGGAAATGCTTTTTATTATCGTTTCACAATCTTAA Run BLAST on NCBI transcript from alignment at scaffold_456:305188..306236 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066605 ID=TCONS_00066605|Name=TCONS_00066605|organism=Clytia hemisphaerica|type=transcript|length=1049bp|location=Sequence derived from alignment at scaffold_456:305188..306236 (Clytia hemisphaerica)
TTAAGATTGTGAAACGATAATAAAAAGCATTTCCTTTGATGAAGGACAAT
TAAACAACTTTATATTGAATTAGTTTTAAAGAATGTTTCTTTGTTACATA
ATGGAAATCTAATTTGCTCATGTCAGATGATTTGCAGCTGATCTGTCAAC
TGGATCTTTTCCATAAGATTTGCTAACCTTTGTGTGTAAACAAAGCAAAG
ATAATAAGAATGCCTCTCTTCTTTGGGATAATGCTTTACTGTATCATTGT
ACATTGTGTTGGGATACATTTTGGTTAACAAATACTAGCTACTAGCTATC
CCATCTATAAAATTCATGTAAACATGAAAGACTTGTTATGTACCTTACAG
CAAAAACAGTACTTCAGTTATGTTCTAAAAGCAgattattttttctataa
ataAACACACTAAACATGTTTTATTAACTCACTGAAAGTCATCACAAATT
TCATGAGAAGACATCCCATAAGTATTACAGTAAGCCCAATAGCAGcatac
attaaaataaaaataccaCTTAACTACATTTTTTAATTGTCATTGTTTCT
GTACCTTATTACACCAAGTATCAAAGTCTCAACCTTTGGAATTTTGATGT
TAGATATAGATAGAAAGTTTAAACAGttatataattatgaaaagCCTCTG
ATAGCTCTCTACATTATAATCTTGTGTAAATGCTTTGTTTTACATTTAAA
TGTTCtaccttttctcatttttaataGAGTCATGTGTTTATAAAGTCATA
TTTTTGTTCATGCCTCTGTAAAAATACTGTCAAAAccttcaaaagaattt
ttcttatCAATAACTTTCTGTTTTTAATATTGATGAATTTTCAAAGAATG
TTTGTTTGGCTATCACAATCATCCCAAAGTAGGTTGATTTTGTTTCTTGT
AGTAAATTTCCTTATCATTATCCTATCCACGTCCTTTTAAGAGGTGTAAG
GAGTACTGTGAAGTGGGAACTCGCATGTCTGTGCTGTAAAATAACTAGTC
CACAGGGTTTTTCCTTATCGTTTGCTAAGAGTAAGAGGGGAAGTAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066605-exon-scaffold_456-1491911889:305188..306236 | TCONS_00066605-exon-scaffold_456-1491911889:305188..306236 | Clytia hemisphaerica | exon |
| TCONS_00066605-exon-scaffold_456-1510915933:305188..306236 | TCONS_00066605-exon-scaffold_456-1510915933:305188..306236 | Clytia hemisphaerica | exon |
| TCONS_00066605-exon-scaffold_456-1575043694:305188..306236 | TCONS_00066605-exon-scaffold_456-1575043694:305188..306236 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:305188..306236 . |
Blast
The following BLAST results are available for this feature:
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