TCONS_00066455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066455
Unique NameTCONS_00066455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length734

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066455 ID=TCONS_00066455|Name=TCONS_00066455|organism=Clytia hemisphaerica|type=transcript|length=734bp
accGTGGATTGAGCAGTTTGCTGAGCTgcataaataaaacaaaagttgCA
TTATAATTTTGTATTATTTTCTTAATGCGCTATCTATTCTTTTAATTTGA
GCTGCCTGCTTATATCTTAATGTGTTATCTCTGTGAGTCACTGGTAATGT
GTTAAGAGAACAGGATGGTTATCCCAATTATTGGCTGTACCCTTACAGCA
GCATTTCAATGTCTTGTTCTTCTTGGacttcttgtcatttttttgGGCTT
GATCATTCTTTATTGGACAACAACAGACAAAATACCAATCATCAAGAGGT
ATCCTAAggagaaaatattttgtgaTGCAAAGACTGATGAAACTAAAGAA
TTTCCTTTCAACGAAAGCAATGGTGATGTTTCATTATCTTTAGTTGTACC
AGCTTACAATGAGGAAGAAAGATtaCCTATAATGTTGGATGAAACATTAG
AATATCTAGAGAATAAACAGaagtcCGATTCTTCTTTTACATACGAAATC
ATTATAGTTGACGATGGGAGCAAGGACAAAACAACACAGgtTGGATTGGG
TTATTGTAAAAAATATGGATCGGAAAAAATTCGTGTTTTAACCTTCCATA
AGAACCGTGGAAAAGGAGGTGCTGTCAGGATGCTTGGAAAGCTTAAGAAG
ACGTCAATTGACGTCGTTGCTATGAGTGCCCTGTCTTATACCACGGAATG
ATCACTAATATCGTCATTCACTTGACTTTCAATC
Run BLAST on NCBI

protein sequence of TCONS_00066455-protein

>TCONS_00066455-protein ID=TCONS_00066455-protein|Name=TCONS_00066455-protein|organism=Clytia hemisphaerica|type=polypeptide|length=178bp
MVIPIIGCTLTAAFQCLVLLGLLVIFLGLIILYWTTTDKIPIIKRYPKEK
IFCDAKTDETKEFPFNESNGDVSLSLVVPAYNEEERLPIMLDETLEYLEN
KQKSDSSFTYEIIIVDDGSKDKTTQVGLGYCKKYGSEKIRVLTFHKNRGK
GGAVRMLGKLKKTSIDVVAMSALSYTTE
Run BLAST on NCBI

transcript from alignment at scaffold_455:166998..178993-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066455 ID=TCONS_00066455|Name=TCONS_00066455|organism=Clytia hemisphaerica|type=transcript|length=11996bp|location=Sequence derived from alignment at scaffold_455:166998..178993- (Clytia hemisphaerica)
ACCGTGGATTGAGCAGTTTGCTGAGCTGCATAAATAAAACAAAAGTTGCA
TTATAATTTTGTATTATTTTCTTAATGCGCTATCTATTCTTTTAATTTGA
GCTGCCTGCTTATATCTTAATGTGTTATCTCTGTGAGTCACTGGTAATGT
GTTAAGAGAACAGGATGGTTATCCCAATTATTGGCTGTACCCTTACAGCA
GCATTTCAATGTCTTGTTCTTCTTGGACTTCTTGTCATTTTTTTGGTAAG
TTGAAATCTTTTCTTAAGAATGTTATGAAAAACAATCATTGATAATTATA
TTAGGAGGGAGGTACCCTTTGAAATACTTTTAGTCATTTTACCATTGTTG
AAAAGATTTGACCTGAGTCAATCTTGAAAAATAGTTTGAAGAAACAACTA
ACTGAAAAGATCTACAGACAAGGACAAAGGGAGAAGACACCCTCCTAGAT
CGGCACAATGCCCATTTACATGTCTGGAATTATTTTGACTTTTGTGTGTA
ATCAAGGCCTAACGAATCAAAGCTCTCTCCTCCGGAATTTTGTTTGTGTT
GGTTGATTAGCTGGCAGCTGCAGGTTAGGCCAGGCCCAATTGATTGTTTG
GTTCGTGTTCTCGAAACTTTGAAAATGGGTCGGTCGGTCAGTCAGTCAGT
CAGTCGGTCGGTCGGTCGGTCGGTCGGTCAGTCAGTCGGTCGGTAGCTAA
AATTGGAACCGTTTTTTCATTTTCCCACCAAAAACCTCAATTTTTTAAAT
TTCTCTAGCAATCGTGCAATCCTGGAATCCATACGCAAATGTAAAGAAAT
AGCCTAAGATAATGCGCAAGATAACTTCTAGTTGGAGATTATGGCGTTCG
CGGCGTGTGCTTAAAGGAATAGACTTTTTTTTAAAGAGGCCACCCTGTTG
AATAATTATGTAGTCCAGCAAAAAAACAATGATACAGTCATGCATAATTA
TTACATTATGCGTGTACAGTAATTATGCATGACTGTATCATTGTTTTTCT
GCTGGAGTACATAATTATTCAACAGGGTGGCCTCTTTAAAAAAAGGTCTA
TATACAGCTGCGAGTCTCTGCTTTTAGGTGGTTAATATTTGTTTTTAAGT
ACGGGTTACACGGGGACCTTTTCTACGATGGCCCCTAAGGCTCACCACGC
ACTTCCAGTTCTTATAAAATTTGTGAACTAGAACTGTCTAGGGTCATGGC
CCAGAAGGCTCCCAAGACACTGCGCACTTCCGAGTTTTTTTGTGTCAACA
CTGTGCACTTCTCCAGACAGTTAGAGAAACCATCCAGGATCCTGCCATTC
TATAAACCAGCAAAAACTAAATGACACTTGTAAACTTAAGTTTCTTACCA
TTTCCCATTGAAAGCAACCAAAAACATTGCTACTTCCCAAAGCCGGAGAC
CAAAACAAATCATCTTCCAAGATTATGGCGCCCTTTTGGATCTATTGTTA
AGACCATCTAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTATAAGAATATCTTATGTGCTTAACTTCAGTAAACCTCGAGTGCT
TCAATGAAGATGAAGAAGGTAAGAAGATAAAAAATGCGCTGGATANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGTTTTTCCGACGCAAAAAAAAATTTCAGCCAA
TTAAAAGCACAGTGTGCTTATACTTACTTTGTTTGCTACATCGTCTAGGC
TAAAAAAAGTGAGAAAAGACAAGAACGCCTTATTTTAATGAGTGTTGTTA
TGATTTTTTTGATTGCGGCCGCGTACAGGAACTCGCCAAATGTTCCTAAC
TGCCAGACGATCTCAATCGAACGGAATCGACGATCGAACCAATCGAACCA
AATCGAACGCAATCGACCAATTGAAATTCAATTGTCGAACGCAATCGAAC
ATCAATCGAACGCAATTGAATATCAATCAAATCTGAAAATTGCGATAATA
TTCGATTGAGATTCGATCGCGTTCGACAATCGAATTTCAATCGGCCGATT
GCGTTCGATTTGGTTTGACTGGTTCGATCGTCGATTCCGTTCTATTGAGA
TCGTCTGGACTTCTAAAAATATTTTAGAGACGCAAAAGTCCCCCTCGAAA
GATAGCCGTTCTGGTCAGCAAAATAGATACTGAGTTGTAATAAATGAGTT
GATGATAATAGCAAAGAGGCTCAGAAATCCCGAGTTATTTTTCTCGAGTT
AGAAATCCAAGTTACGAAAAAACCGAGTTATGACGTCATTTTTCGGAAAT
TTTGACGTCATTTTGTACCTTCTATATGACGTCATTCTCAATTTGGTAGC
TCATTTTTTTTCTCCGTGACTTTAAAATCTCGAGTTATCTCTGATGGTAT
CTTAACTCATTTAAATTTTCAAATCATTTCTCGTTTTTTAACTCGGTTTC
GTTTCTTTTAAATTTTCGAGTTATTTTTCTTCCTGTAGATTCTCAGATTC
TCGAATTATTTTGGCGTTCACAGCAGAGGACTCAAAATACACCCACACAC
TTTCTAGTTTTCATGCACTAGGGTGGTCCAATGGCGGAAAATGCTAGCGG
GGCGTGGAGGCAAAAAAACAAAGTTGATATTTGTTCACTTTTTAGCTTCC
CCGATTTTTGCCACTGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATATTTT
ATGTGTTACGCGCTTTTCCCGTCATAAAAAAATAAAGATCTTTAAAACAA
GCTTGAGTGAATGAAAGTGTCAAAAGTGTTCATTCTACTTAAAACAAATG
TAAATAACGCCGTGTTATATCTTATATTGTTTATCAAGATCTCTATTTGA
AATTTTCTTTGAAAAACAACCATCATAAAAGCAAAGTTATCACTAAGAAA
GTTCAATGCTTAAAATTTGGAGTTTATAAAGTACTTCTTAAAAATTGAAT
AACTTCTGAACATACGCTGACTGGGAGATAACACTTCTCAAGCATCCTTT
GCTGGCTCTAAATTACTCAAATTCATGCAAATCTTGACGCGGATATCAAA
GTTTATTCAATAAATCAAGTTTTTCTTCCTTTTATCCTAAATAGGCTAGA
ATATTTATCCTAGTTAGGATAATTTATCCTATTTAGGCTAAGTACTCGCA
TTTATCCTAATTTTCAATAGTTCTTGACTGTTAATTGCATCCTGNTATAA
TTTATCCTATTTAGGCTAAATACTCGCATTTATCCTAATTTTCAATAGTT
CTTGACTGTTAATTGCATCCTGTAGAAAGCAATTAATATCGTTAATCACA
CTCTTCGATGCAGCGCCAACAGGCGCCAATGTTTTTACAAAATTGATTTT
GATGTTTTTTCTTACATTCTTTTTCATCAAACGTTTTAATTGCATTCAAA
ATTCATTTTGTAAGAAAGAAAATCTTCAAACAACAATTAAAGAAAAACAG
AGAGAAGAGAAAAATACAAAACATTCAGTGTAATTTACTTCCCTAGTAAT
GAGTAAAAAGTAGTGAAACACATTGTGCGATTAGCTCGTAATCACATAAT
AAATCGTACAATTTGAAAATTGCACTCGTGACTTTTTTGTTTCGAATTTT
CCTTGTCCTTTTCTTTAATAACAAAAAAACCACTTGTGCAATACACCTTT
CCCGTAATTTGTAAAACTAATGTGCGGGCATTATTTTGATGCTCTCCACC
GTTTGGGCTCTGGCAGAGACCTAACTCTTCATACAAAAAGTACACGGGAA
ACACATCTTTGGACTTTGTACCCTATACTGCACACAAGCACTTAAGCCAA
AATCCCGCAAAGGCGGGACAAAAATCAGTTTTTTGAAGTTTGCAAAAAAA
TGCCACATAGAAGATCTTTCAAATTCAGTATAATATGTGAATAGAGCAGT
AAAAAATGCAGCTTTTCTATTTTTTCTTTTTTTTGCAAAAGTTCTAGGAA
TGAAAACAAAGGGATAATGATAATTGAATACTATCCATTGATGATCCGCG
GCTCTATCGTAAAGCTAGAATCGCTTCGCATACTCTTCGCTTGAGAAAAT
GATTGACAGATTGAACTTGCGTGCGTTCTGCGAGTGTTCTCGGCTCAATC
CTCGGACCGCTCTAAAAATGGTAGACTGAGCTGTGATAGATCATTTCGAT
GGAATTTGTTGGAATGTTTACAAGGCTCTTGACAGAAAATCATTTGTTTT
ATTGTCAATGATGACAGTGCCGTTATTAATTTTGTTAGATCTGGCAAATT
GATGTTTGTAAGTGCACTTTATAATTTTGATTCCCCATTGAAGAATCATA
TTCTGGTTTTCATGTTATTAGATGCTGTCTGGAGGTAAACAAACCCGTTT
TTGCCTGCGTTTTCTTAGAGAAAGTTGTTTTTTGAGCTTTTGTTAAGTTC
TGTCGAACAAAATCCCCTCAAATTTTAGTATGTTCAATCTATTCATGATA
TTATACCACCCTGAAAATCGTTTGCAAAAAGAAGATCGCTATCAAAAGTT
AGAAGCTGAAAACCCACTTTCCCTAACCCCTCGCAGGCAAAAACGCGTTT
GTTTACCTCCCAAACAATTTTATACACAACGNTTATACCACCCTGAAAAT
CGTCTGCAAAAAGAAGATCGCTATCAAAAGTTAGAAGCTGAAAACCCACT
TTCCCTAACCCCTCGTAGAAGGTTGAATTACGAACATTAAAATCTGCGAA
AATTCCAGAATGAAAAAAGCCGCAAAAATTAATAAAACCCGCAAAATGCA
ATTTCTCGGATATTTTTTTTCGACCGCGAAAATTAGTTCCAATAAGGTAA
TTGTCTTGGGAACTTTTCATTGAGGTAACTCTCTGAAACATGGATTTCTT
AGTTTGACTAGCTGTCATTCTGTACGTTTTTCATCTACCTTGTGGACTGG
TCTCTGCCATTTCCTGATAATTAAAAATTGAAATTTTCCTGGGCAGTCTA
GACTTAACTCCTAGTCTTACCGCTTTTATATTTCCCTTTGAAATATATAA
TACAATGCTGACAAGTTGACCAAACGCATTGACAAGTTATCGGTCCATAA
CAATCCTTGATATTAAAAAAACTGAACATCCTTACAAAAGTTGTCTTTTT
GATTTCCCAAACATTCGTTTTAAGCATTCACTTTGCGCTTCCGTGCGATT
GAAATATCGCAATTATACCAAAATCTGCAACAAAAGCAAAAGTAGTGTCT
TCTANAACTTGAAATATCGCACTTTGTGACACACTGTTTATACCAAAATC
TGCAACAAAAGCAAAAGTAGTGTCTTCTACTGATGCCTTAGCGGCACTTA
GGACTTCTTAGTGCCATGTATGAGGGGGGACTGTAAAATCTCACCACTTA
TAACACCTCTTTTATTTGTTTTTATATTGTTTAGCATTAGTCTATACAAT
AGACAGCTCCAGGCTTTTAGGCCTTACTCTTGGTTTATAGGCACTGCTAT
TGGCAGCCACTAGTCATCCCCACTGGGAATTGCTTATTAATAGGTTTAAA
CATAATAGACAACTTTCACAAAAGATGTTTATCAATAGAGATTTTGAATA
AAAGAATGTTTAAAACACAGCTGATTGGCTTAGGTTTAGAAACTCTCTAT
TGTTTCATTAAAAACCTCAGTGCGCATGCGATTTATCTGGAGAATTTCAA
TATTCAAAACAAGAGCAGTGCTCATATCCCGAAGAGTAGGAGTTTTACGC
TCGAAATGAAGGAAGATATGACATAGCCTAGTTTAGCATAGGCTATTTCT
AATCTTCAATTTCCTGAAGAAAGCAATCTTGATATCTGTTTATATAGGAG
TTTTATTCTACACTGTGTTGGTGTATATACTGACATTAAGAAATATTTTC
CATGATGCCGTCAACTGCTCTAACTTTGGACTATCTGACAAAACATGGGA
CGGTAATTCGGCCACCATTTCACCGAACCTCCAAAGTCATTTGATTTGAG
TTAATGAACAGCGTATTAAAAAATACACAATTTCTCTTTCGCACCAAGTA
GGCTTTTAAATCGAAATATGGAAAAAATCTGTAGTGAAACACACGTGAAT
GTCTGGAACGAAGAAGAACAAATTAGTGGCAAAACAATGTAGCGTTTGAC
GTCACTCGCGCGACAAGTTACACACCCGTTATTTGCTAATCCCATCAGGC
GATAAGTGGTTAGGTGGTGGGCGTTCTCTAATTCTCCAGTCAGCGTCCAG
TCATTTTGAATGAAAACAAAAAAGTTAAAAAGGGCGCGCTATCAGTGAAA
GTTATCGTGACATGTCGACTCTTTTACTTATAAATTTCATGATAAAAAGA
ACTGTTTGCAATTTATTTTATTTAACATGCATTGAATTAACATTGACATA
TTTAATGATGTCAGTGTTGTCAGATGTTGTGAATGTTTTATTAACCTCCT
TTTCATGGGATAAATACCACTGAAATATACATAATATACAAGATGAGAAA
GTATGAGTTTATGGTCTGCAAGTACAGCTTAGATAAGGAGACTTTTCTTA
TTCATTATCTATCAATTGAAGCGGGCAAAGACAACTGTCCAGTTTGATGG
CAGACAAAGGTTTTTGAAAGATATCTTCAGTTAAAACCCAAGGTAGAATA
AACTAAACATGGAACTCAAAAAGAAGAAAGAAGTGAAAAAAAAGAGCAGA
AAAGTAAAAGAAATAGCAAAAAAAAAACAGTTGAAGAACCATCAAAATTT
TTGTTTTTCATTCTCTCTTAGTTTATGCTAGCATCTTAGACTCCTTGTTT
GTTTTATTCAGAATCAGTGAAGTACCTTGTATTTTGCAAATTATCAGACA
CTGAATTCTAAACTTTAAAGTTCAGTATTTTTTGACCTCTGCATTCTGAT
GGATCCATTTTAGTAGGGTGGATTTTGCAGAGATTCCCATAACCATAAGA
TGTTTTAATATGATTTTGAGATTCAACCGATCTGATTGATTTGAATGTTG
AGTGGACTTTTGGATGATTAGCTGTAGTGTAAGTACAGCAAAGAGGCCTC
CCCCTAAAAAAAAAGAATAATCTTTGATAACTTTTGGAATATTTTTTTCA
ATTAACTTAAAATTTTCGAAATAGGATAAAAACTTGATGACTTGTTTGCC
ACCTGATGACGTCAAGCCAATCAGTCAATACTCTTAGCTTTCAAATTAAC
GTCTCCCCGTATTATCAATTATTTTCTCATTTTGGAGTTTTTTTAGAGGT
GCAATTTTTAACCACCTGGCAATCAGGTTTGTTATATTTTGAAGAAATTT
CAGAGTTTCCTTTTATTTGGTTCCCTAAGTATTTGGGACGTAAGAGTATG
TGATTTTAACCAAATTTTGTGGCTGAACCAAAATGACTAAATCGATAGAA
AAATAGATAGATTGATGCTCAGAGATTACGAAAAATCGAAAAATTAGTAT
ATGTAATCACATGATAACGAGTGCAATTCGAGTATTATTGCACGAGTGTT
TTTTTTTTTTTAATTTTCCGAGTCCGAAAGGACGAGGAAAATTCGGAACA
AAAAAATCACGAGTGCAATTTTCGAATTGTACGAGTTATTATGTGATTAC
GAGCTAATCGCACGATGGCTTTCACTACTTTTTCCCAGTTCGAAAAGTAA
ATTAAAGAAATTAAACTAAGAGTTTTATATATTTCTCTTCTCTTTATGAC
TTTCTTTTCTATTGTTGTTTATTGATTTTCTTTCTCACAAAATAAATTTC
GAATGCAATTAAAACGTTCGATGCAAAAAAATGTATGAAAAACATTAAAA
TCAATTTTGTAAACATTGGCGCCGCATTGGAGAGTGTGATTAACGATTAA
TTGCTCTCTACAGGATGCAATTAACGATTAATTGCTCTCTTTGAGGGTGC
GCCAAATAAGAAAAAATAACCCATCGTGCGATTATCATTATAATCCGTAC
ATATTTCACGCGTACTACTTTAATTGCGCATTCACACAGAATAATCAATT
CGCCCACAAAATTTAGTACAGAATTTGCGCTGAAAATAGGTGTGTAAATT
TGTACAAATAGGGTAACAGTAAACAACGTCAACATTTACATTACTTAATA
ACCTACTCTCTAGCGTTTGAACAACCTTGACAAAGAAAAATCAAGAAGAT
TTATAGGATGTTTGAGATGTTTTTTGGTGGATCATCGTAATCTTATAAAA
TTACCCAGTTTTGATAGCTCTATCGTACCAGGTCGTACTTATTGACTATA
TTTTAAAATAATTTCACTTCAAGAATCCTTAAATAATCACTTGTTTTTAA
AGCATTATGACTGACTTTCAAGCCTTGGCTGGTTTACTTATAAATGTTAT
CAGAAATTATAATGTAAGCTAATTCTTTTTATAGGGCTTGATCATTCTTT
ATTGGACAACAACAGACAAAATACCAATCATCAAGAGGTATCCTAAGGAG
AAAATATTTTGTGATGCAAAGACTGATGAAACTAAAGAATTTCCTTTCAA
CGAAAGCAATGGTGATGTTTCATTATCTTTAGTTGTACCAGCTTACAATG
AGGAAGAAAGATGTAAGTTTTACTTAAGTCTATTTTCTCAAGTTGTCCAA
TTTCCCCCCCCCCCTTTTTTAATCCATCCCCCAGCCAAATTTTTTTTTTA
ATATCTTTACAAATATCTTTACAAATATCTTTAAGTTGTAAAGTGAGAGG
TTTTCTATTTTATTTGGGTGGTCGTCTTTCTAGAATTATTTTGGGAAAAG
TGTCGGAAATGTCTAGAGGCACTAAATTTATTACCCAAATTTGTTTCCTT
GATAAGTTACTTGGCATAGTTTTTGAACCAGAATTCAGTGAAAAGTATCC
ATCCACATTGCAAGCCCTTATTTTATCGCGATGTGACTGATAAGGTGGCA
ATATTTAAACTGATATTTTCTCTCTCAGATTAGAAATAAAGGAAAGCAGT
AATTGGAACATTTTTTGTTTTTTTATTTTTCCAGTACCTATAATGTTGGA
TGAAACATTAGAATATCTAGAGAATAAACAGGTATTACATTTATAACAAC
GGATAAATTTTCTTGAACGTTTTAAAACAGAAACTTTTTGCTGTTCATTT
TCTTTTTGATATTTTGATATCATAGAGTTCAACAAAGTAGAGTAGGCTAA
GTTTGATCATCTTTTGATTCCTCACTTTACACTCTATTCAATCTATAGTT
TTCAATTTTCATGTTGGAATACAACTATACAAATGATACAGTATTTAAAA
AGACTTTAAAATAAGGCGTTTTCTTCATCTTTTATCTTACTCGTCAAAGA
ATACTACATCAAGACTTTTCCCCATATTTTCATGTCATTTTTATAATTGA
CAACAACCCTGAAATCGCCCCAAAACAAAATCTTTTTGGCATTTCTGTTA
ATGTTTTTTTTTTTTAGAAGTCCGATTCTTCTTTTACATACGAAATCATT
ATAGTTGACGATGGGAGCAAGGACAAAACAACACAGGTATCAATCCCCAT
CTAAAATGATCTTTCTTTTCAAACTAGCTCTTGATCTTGCACACAAATCT
TACCTTTTGAATTAGTATGGAAGTTCACAAGGCATTACAGGAGTTTTTAA
TGTATTTACACACCCAAAGTTACTAGAAAAGCAAAAACTACAAAAAGTAT
TTTGAAAATAAGGTTGAATTACTCCAAAATGAAATTCTTTTTTTAATTAC
ACAACCAAAGTTACTAGAAAAGCTGATATCTTTGATACAATGTTTTGAAG
GGAAAAAAAATATTTCCTTCAAGAAAAATATATCAAAATATAAAACATAC
AATTGAAATGTACTCTGTGATGAATGTTTTTACTCATTTTTTTAAAGGGG
GATCCAAAATTGTTTAAGCCTTTGTCTGTTCTTAACATTTTGATTACTAA
GCTTTAAAATGCCCTCAATTTGCTTTTAAAACCATCGAAAACTTATGTCC
TGATATGTTTGTTCTTATGAAAAGTGTGGACTAGATTTGTTATATCATGT
AAAAAAGTGAAAATATATAAGAAAGGAGAAAAGAAGCTTACCGAAAAAGG
TGAAAAGAAAATGAAAATGATCCTCATCTGTACTATTTATGGAGCTTATT
GTATTGTAATTAAAGGTTTTATTTTTAATAAGTGTTTCCGTTTCATATCA
GATACATATTTCATATCAGGACAGTGTCTTGCTATTGTTATATTATGCTG
ATATAAGCAGAAAATGTTTATTCTTTTCCTCTTTCTGACCAATTTTTCTC
CACATCCGTGTCAATCCAACGGGAAAAAGCTTGTGAATTAAAATGATGAG
TAAGCAAACGATATCAGTCTTATTTAAAAACAAAACCTTTAAAATGTAAT
TTGGTGCCAAAAATTTACCATTGTAAGCTAACTATATAGCCTGTATAGTG
ATTTTCTTCTAATAACCGTTGGCTTTTTAGACGCATTTGAAGAATTGTAA
AGGTTTCAGACTGATAATTTTGTTTTAAACCCCTACTAGTCAAGGGTATG
TTCGGCTAATCTGAAAATACCTGTCTGCCTATTGAGCCACATACAATTTA
TAGCATGTAACTCAAAGAGTTTAATAATCTAAAGGGTCCAATATGGTATC
GCGAGCTTTAAACAAAGCTACCTGGTATCTCAGGCTCCTTGATCCGCTGC
GCTGGAAGCAAAACTTTCTAATAGGGTTAAGAAGAATTAGGGAGAGAACT
TGAATATCTATGATTTATTTTTTTTCTAGGTTGGATTGGGTTATTGTAAA
AAATATGGATCGGAAAAAATTCGTGTTTTAACCTTCCATAAGAACCGTGG
AAAAGGAGGTGCTGTCAGGATGGTAAGGAGATATAATTTTTTTTCTACAC
GTTTTTTAATAGGAATATCCAAAGTTTCCGAAGCCTTCGGATGTTCTTAA
CTTTTTTCAAGCTTCAAGCTTAAAAATGTTCTTAACATGTTCCTATTTTC
ACCGTTCTACGGGTATTTTTGTCCATTTTCCAAAGAAATTGCCTTAAAAA
AGGTTCTTAACTTGTTCTTAACATTTTGGCCATCGAAGCTTCATGTTCTT
ATACAGTTTGTTCTTATAAAAAAACATATATTCTCACCTTCTTTATTTCG
TTTTTCTATCCTGTCTTTCGATATTAATAAAATAAATTAAACTCTTTAAC
AACGAGATTCAGTTTCCGGATTTCGGGTTTCTTCAGTTTATATGACGCAA
GTTTGGGATAGTAACTCAGAAAATCAGAGAGGATTATTTTTTTTGCCCTT
TTTAGTACATAAGGTTCTAACGGTATTCCTGTTTTGTTCTTTAGCTTGGA
AAGCTTAAGAAGACGTCAATTGACGTCGTTGCTATGAGTGCCCTGTCTTA
TACCACGGAATGATCACTAATATCGTCATTCACTTGACTTTCAATC

Coding sequence (CDS) from alignment at scaffold_455:166998..178993-

>TCONS_00066455 ID=TCONS_00066455|Name=TCONS_00066455|organism=Clytia hemisphaerica|type=CDS|length=3222bp|location=Sequence derived from alignment at scaffold_455:166998..178993- (Clytia hemisphaerica)
CTTGGAAAGCTTAAGAAGACGTCAATTGACGTCGTTGCTATGAGTGCCCT
GTCTTATACCACGGAATGAGTTGGATTGGGTTATTGTAAAAAATATGGAT
CGGAAAAAATTCGTGTTTTAACCTTCCATAAGAACCGTGGAAAAGGAGGT
GCTGTCAGGATGAAGTCCGATTCTTCTTTTACATACGAAATCATTATAGT
TGACGATGGGAGCAAGGACAAAACAACACAGTACCTATAATGTTGGATGA
AACATTAGAATATCTAGAGAATAAACAGGGCTTGATCATTCTTTATTGGA
CAACAACAGACAAAATACCAATCATCAAGAGGTATCCTAAGGAGAAAATA
TTTTGTGATGCAAAGACTGATGAAACTAAAGAATTTCCTTTCAACGAAAG
CAATGGTGATGTTTCATTATCTTTAGTTGTACCAGCTTACAATGAGGAAG
AAAGATATGGTTATCCCAATTATTGGCTGTACCCTTACAGCAGCATTTCA
ATGTCTTGTTCTTCTTGGACTTCTTGTCATTTTTTTGCTTGGAAAGCTTA
AGAAGACGTCAATTGACGTCGTTGCTATGAGTGCCCTGTCTTATACCACG
GAATGAGTTGGATTGGGTTATTGTAAAAAATATGGATCGGAAAAAATTCG
TGTTTTAACCTTCCATAAGAACCGTGGAAAAGGAGGTGCTGTCAGGATGA
AGTCCGATTCTTCTTTTACATACGAAATCATTATAGTTGACGATGGGAGC
AAGGACAAAACAACACAGTACCTATAATGTTGGATGAAACATTAGAATAT
CTAGAGAATAAACAGGGCTTGATCATTCTTTATTGGACAACAACAGACAA
AATACCAATCATCAAGAGGTATCCTAAGGAGAAAATATTTTGTGATGCAA
AGACTGATGAAACTAAAGAATTTCCTTTCAACGAAAGCAATGGTGATGTT
TCATTATCTTTAGTTGTACCAGCTTACAATGAGGAAGAAAGATATGGTTA
TCCCAATTATTGGCTGTACCCTTACAGCAGCATTTCAATGTCTTGTTCTT
CTTGGACTTCTTGTCATTTTTTTGCTTGGAAAGCTTAAGAAGACGTCAAT
TGACGTCGTTGCTATGAGTGCCCTGTCTTATACCACGGAATGAGTTGGAT
TGGGTTATTGTAAAAAATATGGATCGGAAAAAATTCGTGTTTTAACCTTC
CATAAGAACCGTGGAAAAGGAGGTGCTGTCAGGATGAAGTCCGATTCTTC
TTTTACATACGAAATCATTATAGTTGACGATGGGAGCAAGGACAAAACAA
CACAGTACCTATAATGTTGGATGAAACATTAGAATATCTAGAGAATAAAC
AGGGCTTGATCATTCTTTATTGGACAACAACAGACAAAATACCAATCATC
AAGAGGTATCCTAAGGAGAAAATATTTTGTGATGCAAAGACTGATGAAAC
TAAAGAATTTCCTTTCAACGAAAGCAATGGTGATGTTTCATTATCTTTAG
TTGTACCAGCTTACAATGAGGAAGAAAGATATGGTTATCCCAATTATTGG
CTGTACCCTTACAGCAGCATTTCAATGTCTTGTTCTTCTTGGACTTCTTG
TCATTTTTTTGCTTGGAAAGCTTAAGAAGACGTCAATTGACGTCGTTGCT
ATGAGTGCCCTGTCTTATACCACGGAATGAGTTGGATTGGGTTATTGTAA
AAAATATGGATCGGAAAAAATTCGTGTTTTAACCTTCCATAAGAACCGTG
GAAAAGGAGGTGCTGTCAGGATGAAGTCCGATTCTTCTTTTACATACGAA
ATCATTATAGTTGACGATGGGAGCAAGGACAAAACAACACAGTACCTATA
ATGTTGGATGAAACATTAGAATATCTAGAGAATAAACAGGGCTTGATCAT
TCTTTATTGGACAACAACAGACAAAATACCAATCATCAAGAGGTATCCTA
AGGAGAAAATATTTTGTGATGCAAAGACTGATGAAACTAAAGAATTTCCT
TTCAACGAAAGCAATGGTGATGTTTCATTATCTTTAGTTGTACCAGCTTA
CAATGAGGAAGAAAGATATGGTTATCCCAATTATTGGCTGTACCCTTACA
GCAGCATTTCAATGTCTTGTTCTTCTTGGACTTCTTGTCATTTTTTTGCT
TGGAAAGCTTAAGAAGACGTCAATTGACGTCGTTGCTATGAGTGCCCTGT
CTTATACCACGGAATGAGTTGGATTGGGTTATTGTAAAAAATATGGATCG
GAAAAAATTCGTGTTTTAACCTTCCATAAGAACCGTGGAAAAGGAGGTGC
TGTCAGGATGAAGTCCGATTCTTCTTTTACATACGAAATCATTATAGTTG
ACGATGGGAGCAAGGACAAAACAACACAGTACCTATAATGTTGGATGAAA
CATTAGAATATCTAGAGAATAAACAGGGCTTGATCATTCTTTATTGGACA
ACAACAGACAAAATACCAATCATCAAGAGGTATCCTAAGGAGAAAATATT
TTGTGATGCAAAGACTGATGAAACTAAAGAATTTCCTTTCAACGAAAGCA
ATGGTGATGTTTCATTATCTTTAGTTGTACCAGCTTACAATGAGGAAGAA
AGATATGGTTATCCCAATTATTGGCTGTACCCTTACAGCAGCATTTCAAT
GTCTTGTTCTTCTTGGACTTCTTGTCATTTTTTTGCTTGGAAAGCTTAAG
AAGACGTCAATTGACGTCGTTGCTATGAGTGCCCTGTCTTATACCACGGA
ATGAGTTGGATTGGGTTATTGTAAAAAATATGGATCGGAAAAAATTCGTG
TTTTAACCTTCCATAAGAACCGTGGAAAAGGAGGTGCTGTCAGGATGAAG
TCCGATTCTTCTTTTACATACGAAATCATTATAGTTGACGATGGGAGCAA
GGACAAAACAACACAGTACCTATAATGTTGGATGAAACATTAGAATATCT
AGAGAATAAACAGGGCTTGATCATTCTTTATTGGACAACAACAGACAAAA
TACCAATCATCAAGAGGTATCCTAAGGAGAAAATATTTTGTGATGCAAAG
ACTGATGAAACTAAAGAATTTCCTTTCAACGAAAGCAATGGTGATGTTTC
ATTATCTTTAGTTGTACCAGCTTACAATGAGGAAGAAAGATATGGTTATC
CCAATTATTGGCTGTACCCTTACAGCAGCATTTCAATGTCTTGTTCTTCT
TGGACTTCTTGTCATTTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041573XLOC_041573Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066455-proteinTCONS_00066455-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066455-exon-scaffold_455-1575043694:178749..178993TCONS_00066455-exon-scaffold_455-1575043694:178749..178993Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1575043694:169832..170009TCONS_00066455-exon-scaffold_455-1575043694:169832..170009Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1575043694:169363..169409TCONS_00066455-exon-scaffold_455-1575043694:169363..169409Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1575043694:168908..168976TCONS_00066455-exon-scaffold_455-1575043694:168908..168976Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1575043694:167572..167664TCONS_00066455-exon-scaffold_455-1575043694:167572..167664Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1575043694:166998..167099TCONS_00066455-exon-scaffold_455-1575043694:166998..167099Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:178749..178993TCONS_00066455-exon-scaffold_455-1510915933:178749..178993Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:169832..170009TCONS_00066455-exon-scaffold_455-1510915933:169832..170009Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:169363..169409TCONS_00066455-exon-scaffold_455-1510915933:169363..169409Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:168908..168976TCONS_00066455-exon-scaffold_455-1510915933:168908..168976Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:167572..167664TCONS_00066455-exon-scaffold_455-1510915933:167572..167664Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1510915933:166998..167099TCONS_00066455-exon-scaffold_455-1510915933:166998..167099Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:178749..178993TCONS_00066455-exon-scaffold_455-1491911889:178749..178993Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:169832..170009TCONS_00066455-exon-scaffold_455-1491911889:169832..170009Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:169363..169409TCONS_00066455-exon-scaffold_455-1491911889:169363..169409Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:168908..168976TCONS_00066455-exon-scaffold_455-1491911889:168908..168976Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:167572..167664TCONS_00066455-exon-scaffold_455-1491911889:167572..167664Clytia hemisphaericaexon
TCONS_00066455-exon-scaffold_455-1491911889:166998..167099TCONS_00066455-exon-scaffold_455-1491911889:166998..167099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:166998..178993 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	3.60468	0	0	5.82811	3.00031	2.32702	0	1.78987	0	0	0.982344	0	9.56738e-09	0	0	0	0	0	0	0	0	0	0	0	1.33182	4.85335	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
Blast
[Close]
BLAST of TCONS_00066455 vs. Swiss-Prot (Human)
Match: ALG5 (Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.905e-41
Identity = 67/122 (54.92%), Postives = 92/122 (75.41%), Query Frame = 3 
Query:  267 TTTDKIPIIKRYPKEKIFCDAKTDETKEFPFNESNGDVSLSLVVPAYNEEERLPIMLDETLEYLENKQKSDSSFTYEIIIVDDGSKDKTTQVGLGYCKKYGSEKIRVLTFHKNRGKGGAVRM 632
            TT  K+P + R+ +EK F +AK  + +  P    +    LS+VVP+YNEE+RLP+M+DE L YLE +QK D +FTYE+I+VDDGSKD+T++V   YC+KYGS+K+RV+T  KNRGKGGA+RM
Sbjct:   29 TTATKMPALHRHEEEKFFLNAK-GQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQKRDPAFTYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIRM 149
The following BLAST results are available for this feature:
BLAST of TCONS_00066455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG53.905e-4154.92Dolichyl-phosphate beta-glucosyltransferase OS=Hom... [more]
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