TCONS_00066417 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066417
Unique NameTCONS_00066417
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066417 ID=TCONS_00066417|Name=TCONS_00066417|organism=Clytia hemisphaerica|type=transcript|length=1448bp
TAGGCATTTGGTGACAAACTGCTTGGTAAAGAATATCGGATGGAGCTATG
TAATAGTGGATTTTTATTTCTATACTCCCAATCAAAAGTACAATCACTGC
TAATTACAAAGGACTCTCCGATCGacaaagatttacaaaaattaaaagaa
gtAGCATCAGTTGACATCAACATCGAACAATTACTTGTGGTACCAGCCTA
TTCTGAAGTTGGCGATGACGTCATAGCCTTGTTTTGCTTGTTCAACAAAA
TCGGTGCTAAAACTGGCTTCACCAAACTCGACGAAGAACTCATGCAGATG
GTGGTGAAAAATTGTCGACATATTGTTTGTAATGCTTTAGATTGGAAATC
ACAACTTATTATACAACGTCAAAACGAGagtTTGTTAGAAATTTCGAAAA
CCTTATTTAGCCATCTAGACGATGTGTCCATTTTACTGCACAAGATTATG
GAGGAAGCACGCAACTTGACTAACGCTGAACGCTGTTCACTCTTTCTTGT
CGATCACAATAGGGGAGAATTGATCGCTAAAGTTTTTGACGGCATCGAAT
CGGAGAATTCTTCAGAAATACGTATCCCAATAACGAACGGTATTGCTGGT
TACGTTGCTACGACAGGCGAAACTTTGAATATCAAGGATGCTTACTCACA
CCCTCTCTTTTATAAAGAAGTCGACCAAAAAACTGGATTCAAAACTAGGC
ATATTTTATGTTTTCCTATTCGCTCAGTATCTGAGCAAATTATCGGTGTA
GCTCAACTATGTAACAAATTAAATGGGAATTGTTTTACGAAATTCGACGA
AGAACGGACACTAGGATTTGCGATTTTTGTTGGTCTTTCGCTCGTACAGA
GTTTGCTTTACAAGAAAGCAACCGATGCCAAACAACGAAGCAAACTCGCC
AACGAACTTATGCTTTATCATATGATGGTCTCACAAGAAGAAATTGACAG
TTATGTGAAGGTTGCCATGCCAACGAAAGATTCTCTTCATCCGGATATGG
ATAAATTCAGTTTCATGCCAAGAATCTCTTTTGCTGAAACTGACAGCATA
AAGGTTGTTTTGAGTATGTTCAATGATCTCAATGTCATCAAACGTTGGAA
AGTTTCAGAATCAACATTAGTCAGATTTATATTAACAGTTCGAAGAGGGT
ATCGTGACGTTCCATATCATAATTGGACGCATGCGTGGACTGTGGCTCAT
TTCTCATACACTTTATTGAAGAAAACAAACGCGTTGGACTACTTAAGTGA
TTTAGAGGTGTTTGTCCTTCTGGTCTCTTGTTTATGTCATGATATTGATC
ACAGAGGAACCAATAACTCTTTCCAAATATCATCGCAATCTGTGTTAGCT
TCATTATACAGTTCAGCTGGTTCAGTGTTAGAACGTCACCATTTTGCACA
AGCAATGTGTATCGTTCAAACGGAACACAACAACGTCTTTGAAAGCCT
Run BLAST on NCBI

transcript from alignment at scaffold_455:310801..318766+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066417 ID=TCONS_00066417|Name=TCONS_00066417|organism=Clytia hemisphaerica|type=transcript|length=7966bp|location=Sequence derived from alignment at scaffold_455:310801..318766+ (Clytia hemisphaerica)
TAGGCATTTGGTGACAAACTGCTTGGTAAAGAATATCGGATGGAGGTACG TGTTCGCCGCTTTCATATAAACTAAATatctctttttaaaatttcttatc aGCAGCCTTAGAAGATACCTTTTTTGCATTTGATAGTAAGAGGGATCTCA CATAAATCTTTTACTCTGCTATGGAAATCTTGTTTTGGAAAATTGTACGA ATTCTGCGTTTCAAATTTCCATTAACATTTTTATTGATCCGATATTTTAT CTACTCTCTCTTTCAGCTATGTAATAGTGGATTTTTATTTCTATACTCCC AATCAAAAGTACAATCACTGCTAATTACAAAGGTATcagattttctttaa ttttctcccttcttttcaaacatgaaaaataacttaactttaaaatttga aacccATCAGTGTTTTTCATCGAAATTCCCTCTTCGTATTTCACGCCTTC CATGAAAAAGAGCTGTTTTCAGAATCAACCAATCGAACCCACCTAAAAGG CAAGAATTTTTGGCAGAATAAAAATTTGGTGGTTTTGGCCAAAAtgcgcc aaattaagttcccgctaaattaaatttcctcataatttttttttgttcat ccTCTCAATTTTACTCCCTTAAGGTATATCGATGTTTCGTTTATAaataa gggttggaaaaatcagaaaatctcaGCCTCAGAAAATCTCAGGAAGAAAG GGGAGTaaatcaactttttgaaatctggtcaaattagtcccgataagggt cggaaaaaaacaaaaattttcctaatttgtgtttttttattcacGCTAAA GGTAGGTTCGAAAGTCGGGTGGTTCGTACCCGTCAGCTCAGTACCCCTAT TCCccctgtaaaaaaattcaaaccctGTAGAAGAAAGAATCCATTCAGCG CTACGAACATTGNAAAtgaggaaaataagaacatgttaagaacattttta ggcttgaaactgaacaagttaagaacatccgaaggcttcaaaaatcttat acgttctaataaaaaaacgtgtagtaatACATAGCAGGGAGTGAGAAATT ACATCGACTACTCACTTATTTAAGAGCTGTTGCAGCTTTTGATTTGTTTC ACTTTCCCTTTTCTTTAGGCATTTGGTGACAAACTGCTTGGTAAAGAATA TCGGATGGAGGTACGTGCTCGCCGCTTTCATAAAAACTAAATatctcttt ttaaaatttcttatcaGCAGCCTTAGAAGATACCTTTTTTGCATTTGATA GTAAGACAGAGGGATCTCGCATAAATCTTTTTCTCTGCTATGGAAATCTC GTTTTGGAAAATTGTACGAATTCTGCGTTTCAAATTTCCATTAACATTTT TATTGATCCGATTTTTATCTACTCTCTCTTTCAGCTATGTAATAgtggat ttttatttttatactcCCAATCAAAAGTACAATCACTGCTAATTACAAAG GTATcagattttctttaattttctcccttcttttcaaacatgaaaaataa cttaactttaaaatttgaaacccATCAGTGTTTTTCATCGAAATTCCCTC TTCGTATTTCACGCCTTCCATGAAAAAGAGCTGTTTTCAGAATCAACCAA TCGAACCCACCTAAAAGGCAAGAATTTTTGGCAGAATAAAAATTTGGTGG TTTTGGCCAAAATGCGCCAAACTAAGTTCCCGCTAAATTAAATTtcctca taattttttttttttgttcatccTCTCAATTTTACTCCCTTAAGGTATAT CGATGTTTCGTTTATAAAttagggttggaaaaatcagaaaatctcaGCCT CAGAAAATCTCAGGAAGAAAGGGGAGTaaatcaactttttgaaatctggt caaattagtcccgataagggtcggaaaaaaacaaaaattttcctaatttg tgtttttttattcacGCTAAAGGTAGGTTCGAAAGTCGGGTGGTTCGTAC CCGTCAGCTCAGTACCCCTATTCCccctgtaaaaaaattcaaaccctGTA GAAGAAAGAATCCATTCAGCGCTACGAACATTGGGGTGTTCGTTCTATAA TTATGAATCTCATTGATTTTTTTAACTCATACGTATTTCTTTTCAGGACT CTCCGATCGacaaagatttacaaaaattaaaagaagtAGCATCAGTTGGT ACGTTTCTTATTCACCAAGTACAGTTCTGAAATTCATAaactatttattt ttgaattgacTTTGCATCCCCTTTTTGTCGCCAAATTTCTTGACTtgaat ttctatatttttttaaatgcctcAGAAAATAACGACAATAAAAAATCtta aagccagattgacattatgttttccgaggtctgaatcgctgcttCAAATA CTCTGAGCTTGCATAAAGATTGCAGTTAaattcaaccaatcatcaaaaca aaagatagcGCATGACGTAGCTTATTGTTCGATTCAACACTTCGATGTCT TCACtttaatataacattttaataaCTAGAGAGTTTACAATGTTTTGACT GCAAAGTTTCGATtaagaattggaatgaattgtcTGCGTTTTTAATGAAT CTGTATAATGTTTTTGCAGAATAAGCAAACAGACTCATGAATAGATATAC TGGCTAGATTATCAGTCTCATCTTTTTATAAANACAGACTCATGAATAGA TATACTGGCTTTAAATTATCAGTCTCATCTTTTTATTACCCTTTTCCTAG ACATCAACATCGAACAATTACTTGTGGTACCAGCCTATTCTGAAGTTGGC GATGACGTCATAGCCTTGTTTTGCTTGTTCAACAAAATCGGTGCTAAAAC TGGGTGAGAATTTCCTTTTCCAATAAAGCTTTAGGGGATTGTATACGTTT ATCGTGCGTTAGTATAATCCGTTCGCAATATTACGTCGAAGTTTCTTTGT AAGATAACTCTAGTGGTAAATACTTGAATGAATGCGCATACACGGAGGGG CGTATCTCCTTCGTAgttctttttgaaaatcctcAAACCAAACTCAAAAG ACGACAAAATACTTTctatggaaaaaaatattgatgtgTTGAATCTGGTA TAGACAATAGGGTATTAGGGACCAAACGTGCCATCGTTCAAATTATTTCT GCTATTCGAccaattttatatattttttactaTAGCTTCACCAAACTCGA CGAAGAACTCATGCAGATGGTGGTGAAAAATTGTCGACATATTGTTTGTA ATGCTTTAGATTGGAAATCACAACTTATTATACAACGTCAAAACGAGGTT GGTTCATGAATTCACTGTTAAGTGTTTTGAGTCTTATTACCAACCTGTTA GTTCAGAGTGTGTTGACGCCATTAACggttacaaaaattatttttaagga GGACAATTCTTAATAGATGATTTTCCTAACAATTGAGAAATTACCAAGCA AATTGATTGGTTGCCAGAGCTGCATAAGAGACTAAGACTGGTCAAGTACA TGACCTTTTTTGACAATAATATCAAGGatgtttagattttttcctTGAAG TTTCAGTAAACAATTTctctttctgtttttttttttagagtTTGTTAGAA ATTTCGAAAACCTTATTTAGCCATCTAGGTAAGTTAAATCTCTTAACCAT AGAAATTCAAATATCCTCGCAAAtcctttttaattttcaaggaGGAGTTT TTAAGAACGTGGGTTATAAGTCATAACTCTATATCTTAAGTATTCGATTT GTCTTCTGAGCGTTCTCAATACTCTATAGAATTCATGATCAAGTCTACAA CATTTATTTTCAATTGATCATAAGTTActccaaaaatctttttgatcaTC GATCCTTACCATGGTGTGACATATACTAAGGGTATACTACATTTTTCTAA TCCACAGACGATGTGTCCATTTTACTGCACAAGATTATGGAGGAAGCACG CAACTTGACTAACGCTGAACGCTGTTCACTCTTTCTTGTCGATCACAATA GGGGAGAATTGATCGCTAAAGTTTTTGACGGCATCGAATCGGAGGTAAAA TATGTGTTAACCACTCTTGAGTAAAAGTCTAGTTGTAGCATGTAGGTGCG TTCATCTTTGCACAATAGCTGTTACCTCACTGTATTTCAAGATTATATcc atccctgtctcaatgacccctgtgaaattttgaaatccaccgggatagtt ttgaaaaaagtataatTTCAGTAGGTTTAAAATTGAGATCTCACTGAGGT GAGCGAGATTTTCACCAGATCGAGAAGTTTTTCTCTTAAAGCATTTGCGG CTCTTTGTCCTAGAATTCTTTGGCAtgtatttttttcgattttgacgaCC GGAATAAGATcataaatttccaaattttgatcaGGTCAGAGAATTTCAAT TGATTTTGCCGGGTTTACTCATTATCTCAGCGGGGCTTAAAATAAGGCCA TTTTAGCTATATTCTTCACCGGGTCATTTACTGAAGCAATTCTGACCGgt tcactgatacaggggtgtatataTTTAGATATCTTATACATTGAATTCCT TTTTCTGAAACTAATGAAttgtattttcacttttcagAATTCTTCAGAAA TACGTATCCCAATAACGAACGGTATTGCTGGTTACGTTGCTACGACAGGT ACTTAAAATTATTTATTGTAAAACTTTCCGTAGCCCTTCTTACGGCTTAA TGAAGTTGACACAAAATCAAAGTGCATATTATTGATATAGAGGGATACCT GAACATATTTCCCGTATAtcaatttctctttttctttcagGCGAAACTTT GAATATCAAGGATGCTTACTCACACCCTCTCTTTTATAAAGAAGTCGACC AAAAAACTGGATTCAAAACTAGGTAAAAACTAACTTCGGATTCAAAAGTT ATTTCTTcctcaatttttaaaatttttccagaAATAATTAACCTGTTAga ttaattttctttaaaatatctttccaacggtgtacaTAAAAAAGTGTGCT GAGAAAGATACAGTTTATACAAATTACCCAAAGTTGAATATTATATTCTC TTCTTTTTATTTCCAGGCATATTTTATGTTTTCCTATTCGCTCAGTATCT GGTGAGtttcttctttcatttcatCCATTCAAAACTTTACTAAACCTTTA AGGTGAAATGGCCGGTAAACATTGCTTGTCTTTTCTATACAAatgataaa gaataaaaaagaatttatatCAAGGACTATTATTTGTAAGCTTCAAAATT CCAAATGGTAGAAAGTTTCCACCTaaataatttgtaaaacttTGTAAACT AGTCCTCAAACGTAATTCTAAGGCGAATGGTGCTGATAATGTTTACTTCT ATCTTTGGTTACAGAGCAAATTATCGGTGTAGCTCAACTATGTAACAAAT TAAATGGGAATTGTTTTACGAAATTCGACGAAGAACGGACACTAGGATTT GCGATTTTTGTTGGTCTTTCGCTCGTACAGGTATGTAGTATGCTGGTGTT CAAAGTTTTGTAAACTCTCTATACTGACTTCATTCTACTATAGTTTGAAC CCTCGGTACAGTTTTGAATTGTAGGGAGTGAGAAAATTATGACATCTTCC CAAAAGCCATAGCCATCTTAATCTCTTACTTTATTGAAGCACATGGATTG TGTAAAGGACATCATTTAAAGTATCAGGATATATCAGGAGATACCTTCAT GATCATGTGCTTACACAAcatttcaaaacaatagaaacttttcCCCCTCC CGAGCAGActagagtcgtttataatgcatgtaatacataGTATAGGTGTT TAATGATGATACggttattgttacgggatttagtttgtataaaattgact aaaatttgataaatccctccattactttttgctttatttctactgaaTTA GTAGTCTACCTTGCTAGACTACCTTCCGAGACGTACGAgcacagtttttg aaaaattattttgtttaattctgctttgtcagcatagaggtGCGTGCCTC CTTTCTATATCATAATAAAGAATATAACTTAAGGCTATACAATATTAAAC GAGTATGATTTAATTGTCACCTTTATCATTTACTTGTCCAGAGTTTGCTT TACAAGAAAGCAACCGATGCCAAACAACGAAGCAAACTCGCCAACGAACT TATGCTTTATCATATGATGGTATGTTGTTACACAAATAGCTCTACACtaa aattttgttcttattaagtATATGAAAAGTGGTTTGAATATTTTCTATGA ATTCTATGAATTCAATGTGTTATGAAGATGAATAGTTTCTCAATGAGTCC ATCAGGTTCGGTCCAATGATCTGAGAACGTTGGAGAATAAATGTAGTCCA CGAATCCTTTTttatttgcaaagaaaaaataacatcTAACTTAATACAAT AGTGATCTGGGTTTTTACGCCAACTATGGTTACTCGTatatttttcatga tattttcattttcactgctTACCAGGTCTCACAAGAAGAAATTGACAGTT ATGTGAAGGTTGCCATGCCAACGAAAGATTCTCTTCATCCGGATATGGAT AAATTCAGTTTCATGCCAAGAATCTCTTTTGCTGAAACTGACAGCATAAA GGTATAATGATGATTAATTGATGACTTTTTACattggagtctctttaact tgaatatctccttaactcgtACAAATTTGTGTTCTCCGTGCGgatttgag ttatggagactccattgtATTAATATTATCCCATGACCCAGTCCATTCGA CTTTCATTCAAATTAATCCCGTTAACCTAGATTTTTTCCTATATTTTAAA GTCTTTGCAACTTTACAAGGAGATgtattgataattttttatctatatTT GTAAGTCAGAGTCGATTTGCCAGTGTCTTGTAGAACTATCTTTTTGTCAC CGTTTTTATTGATTTATAATTTACTCTCTTTCTCCAGGTTGTTTTGAGTA TGTTCAATGATCTCAATGTCATCAAACGTTGGAAAGTTTCAGAATCAACA TTAGTCAGGTATATGATCATTTCTAAGCTAAGCCCAAAGTTAAAGAGATG ATCATATGGCCTAAGGTTTTTGGCCAACTAAAACCTTCCACATAAAGCAA TTAAAATATCTAGTTTCTGTGCGGTTCTTAAGTTAAAATTCTATTATTTT CATGCTATTATTATTTTCATACCTATAACTTTACTTGATTATCAGGACTT TGGCACATAAACAGAGAAAAATAAGTCTTGTTAAGGACCATATAAGGATT TTTCTCAAATGATGGTAATCTCATTAAATTCTCATTCAATTACACCGAGT GCCACCATCGTGTCTGTAAACAGTTCCAATATCTACAGAGAATTCATTTC CGTAGAGAGTCTGTACTACGCAACGTTATACGTGAGGCAAAGCCCCTTTC TTTGAACATAAAATATGAGCAGGTTCTTTCTCTTTCTAGATTTATATTAA CAGTTCGAAGAGGGTATCGTGACGTTCCATATCATAATTGGACGCATGCG TGGACTGTGGCTCATTTCTCATACACTTTATTGAAGAAAACAAACGCGTT GGACTACTTAAGTGATTTAGAGGTGTTTGTCCTTCTGGTCTCTTGTTTAT GTCATGATATTGATCACAGAGGAACCAATAACTCTTTCCAAATATCATCG GTGAGTCCAATGGGTGAAATCCCACTTTATCAAACATACTGTATTTCGCA AAGAAGTAAATTTTGACATGtatgattttttacatttttagttttaatgG ACATTATGTTTGATTCCGACGgttgatattttttaataaaacttgccaag aaaaaatatatattttgaagAGGTACTCGTGTTATCTCTCTATTTCATTT TGTTCTAGTTTTACCGATCATGAATTTCACGGTATAAATCCCTTATCTTT CAGCAATCTGTGTTAGCTTCATTATACAGTTCAGCTGGTTCAGTGTTAGA ACGTCACCATTTTGCACAAGCAATGTGTATCGTTCAAACGGAACACAACA ACGTCTTTGAAAGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041561XLOC_041561Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066417-exon-scaffold_455-1491911889:310801..310845TCONS_00066417-exon-scaffold_455-1491911889:310801..310845Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:310801..310845TCONS_00066417-exon-scaffold_455-1510915933:310801..310845Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:310801..310845TCONS_00066417-exon-scaffold_455-1575043694:310801..310845Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:311067..311132TCONS_00066417-exon-scaffold_455-1491911889:311067..311132Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:311067..311132TCONS_00066417-exon-scaffold_455-1510915933:311067..311132Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:311067..311132TCONS_00066417-exon-scaffold_455-1575043694:311067..311132Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:312897..312948TCONS_00066417-exon-scaffold_455-1491911889:312897..312948Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:312897..312948TCONS_00066417-exon-scaffold_455-1510915933:312897..312948Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:312897..312948TCONS_00066417-exon-scaffold_455-1575043694:312897..312948Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:313501..313603TCONS_00066417-exon-scaffold_455-1491911889:313501..313603Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:313501..313603TCONS_00066417-exon-scaffold_455-1510915933:313501..313603Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:313501..313603TCONS_00066417-exon-scaffold_455-1575043694:313501..313603Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:313936..314047TCONS_00066417-exon-scaffold_455-1491911889:313936..314047Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:313936..314047TCONS_00066417-exon-scaffold_455-1510915933:313936..314047Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:313936..314047TCONS_00066417-exon-scaffold_455-1575043694:313936..314047Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:314339..314378TCONS_00066417-exon-scaffold_455-1491911889:314339..314378Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:314339..314378TCONS_00066417-exon-scaffold_455-1510915933:314339..314378Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:314339..314378TCONS_00066417-exon-scaffold_455-1575043694:314339..314378Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:314658..314794TCONS_00066417-exon-scaffold_455-1491911889:314658..314794Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:314658..314794TCONS_00066417-exon-scaffold_455-1510915933:314658..314794Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:314658..314794TCONS_00066417-exon-scaffold_455-1575043694:314658..314794Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:315338..315398TCONS_00066417-exon-scaffold_455-1491911889:315338..315398Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:315338..315398TCONS_00066417-exon-scaffold_455-1510915933:315338..315398Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:315338..315398TCONS_00066417-exon-scaffold_455-1575043694:315338..315398Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:315541..315622TCONS_00066417-exon-scaffold_455-1491911889:315541..315622Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:315541..315622TCONS_00066417-exon-scaffold_455-1510915933:315541..315622Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:315541..315622TCONS_00066417-exon-scaffold_455-1575043694:315541..315622Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:315817..315851TCONS_00066417-exon-scaffold_455-1491911889:315817..315851Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:315817..315851TCONS_00066417-exon-scaffold_455-1510915933:315817..315851Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:315817..315851TCONS_00066417-exon-scaffold_455-1575043694:315817..315851Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:316115..316230TCONS_00066417-exon-scaffold_455-1491911889:316115..316230Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:316115..316230TCONS_00066417-exon-scaffold_455-1510915933:316115..316230Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:316115..316230TCONS_00066417-exon-scaffold_455-1575043694:316115..316230Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:316842..316919TCONS_00066417-exon-scaffold_455-1491911889:316842..316919Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:316842..316919TCONS_00066417-exon-scaffold_455-1510915933:316842..316919Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:316842..316919TCONS_00066417-exon-scaffold_455-1575043694:316842..316919Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:317226..317351TCONS_00066417-exon-scaffold_455-1491911889:317226..317351Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:317226..317351TCONS_00066417-exon-scaffold_455-1510915933:317226..317351Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:317226..317351TCONS_00066417-exon-scaffold_455-1575043694:317226..317351Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:317688..317758TCONS_00066417-exon-scaffold_455-1491911889:317688..317758Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:317688..317758TCONS_00066417-exon-scaffold_455-1510915933:317688..317758Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:317688..317758TCONS_00066417-exon-scaffold_455-1575043694:317688..317758Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:318190..318400TCONS_00066417-exon-scaffold_455-1491911889:318190..318400Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:318190..318400TCONS_00066417-exon-scaffold_455-1510915933:318190..318400Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:318190..318400TCONS_00066417-exon-scaffold_455-1575043694:318190..318400Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1491911889:318654..318766TCONS_00066417-exon-scaffold_455-1491911889:318654..318766Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1510915933:318654..318766TCONS_00066417-exon-scaffold_455-1510915933:318654..318766Clytia hemisphaericaexon
TCONS_00066417-exon-scaffold_455-1575043694:318654..318766TCONS_00066417-exon-scaffold_455-1575043694:318654..318766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:310801..318766 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.4563 7.38063 6.4813 4.69125 14.6997 14.3931 72.4184 77.2341 46.103 49.6006 33.0919 31.0599 24.6069 21.8554 7.76456 10.3059 30.7682 53.1681 34.446 35.3212 24.5554 22.6458 13.4286 19.4134 55.0385 43.3396 15.7253 10.72 5.69905 5.24108
Blast
BLAST of TCONS_00066417 vs. Swiss-Prot (Human)
Match: PDE2A (cGMP-dependent 3',5'-cyclic phosphodiesterase OS=Homo sapiens GN=PDE2A PE=1 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 6.142e-141
Identity = 224/480 (46.67%), Postives = 324/480 (67.50%), Query Frame = 1
Query:    7 FGDKLLGKEYRMELCNSGFLFLYSQSKVQSLLITKDSPIDKDLQKLKEVASVDINIEQLLVVPAYSEVGDDVIALFCLFNKIGAKTGFTKLDEELMQMVVKNCRHIVCNALDWKSQLIIQRQNESLLEISKTLFSHLDDVSILLHKIMEEARNLTNAERCSLFLVDHNRGELIAKVFDG-IESENSSEIRIPITNGIAGYVATTGETLNIKDAYSHPLFYKEVDQKTGFKTRHILCFPIRSVSEQIIGVAQLCNKLNGNCFTKFDEERTLGFAIFVGLSLVQSLLYKKATDAKQRSKLANELMLYHMMVSQEEIDSYVKVAMPTKDSLHPDMDKFSFMPRISFAETDSIKVVLSMFNDLNVIKRWKVSESTLVRFILTVRRGYRDVPYHNWTHAWTVAHFSYTLLKKTNALDYLSDLEVFVLLVSCLCHDIDHRGTNNSFQIXXXXXXXXXXXXXGSVLERHHFAQAMCIVQTEHNNVFE 1443
             GDK+LG+E    L       +  +  +Q   +T +     D+Q+L+ +   ++  + +L VP  S   D V+AL C FNK+     FT  DE ++Q        ++ + L ++ +  ++ + ++LL+++K LF+HLDDVS+LL +I+ EARNL+NAE CS+FL+D N  EL+AKVFDG +  + S EIRIP   GIAG+VATTG+ LNI DAY+HPLFY+ VD  TGF+TR+ILCFPI++ ++++IGVA+L NK+NG  F+KFDE+    F+I+ G+S+  SLLYKK  +A+ RS LANE+M+YHM VS +E    +   +    ++  +   F++ PR S  E D+   +LSM  D+N I  +K+   TL RF L V++GYRD PYHNW HA++V+HF Y L K     +YL D+E+F L +SC+CHD+DHRGTNNSFQ++S+SVLA+LYSS GSV+ERHHFAQA+ I+ T   N+F+
Sbjct:  279 IGDKVLGEEVSFPLTGCLGQVVEDKKSIQLKDLTSE-----DVQQLQSMLGCEL--QAMLCVPVISRATDQVVALACAFNKLEGDL-FTDEDEHVIQHCFHYTSTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEIITEARNLSNAEICSVFLLDQN--ELVAKVFDGGVVDDESYEIRIPADQGIAGHVATTGQILNIPDAYAHPLFYRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVNEAQYRSHLANEMMMYHMKVSDDEYTKLLHDGIQPVAAIDSNFASFTYTPR-SLPEDDTSMAILSMLQDMNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFD 747          
The following BLAST results are available for this feature:
BLAST of TCONS_00066417 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDE2A6.142e-14146.67cGMP-dependent 3',5'-cyclic phosphodiesterase OS=H... [more]
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