TCONS_00066394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066394
Unique NameTCONS_00066394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1534

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066394 ID=TCONS_00066394|Name=TCONS_00066394|organism=Clytia hemisphaerica|type=transcript|length=1534bp
GATCTTTTTCAGTGtaactaaaaagaaaatttacaaaaacaaacaagacA
ATACAAACAACAAGAAGCATTTGGTTTGAAACTGACAAGGACATAAGTGG
GCAAACCAAGGAATGTGTAGATACCCTTGAGGTTTCGGCAAATAACCAAG
GACTGGCTGTACTATGATTGGATCCACGTGCAGCTGAGCAGgataaaaac
atttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTACGAAAAAAGA
AGGAAGAAATCCTTGCCAAAAAGAAAGCACAAGAAGAACAGAAAAAGCAG
GGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGggagtttttt
agaaaaattcaaatccatacaaaatcaaaccaaaactCCAGACATTAAAA
AAGAACCGCAAAGTACTGCTGCACCGATGGCGTTTGCGAATGATGGAAGT
TTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAAGCAGGAGCC
TGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTAAAAAGACAT
CTAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCCCAAATAATG
TCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGCACCCACCCA
ACCGCCCCAAGCCGATGATTACGAAGTAGCACGCGAGTTGGCGGAGAAAG
TTTACAAAGAAGGAAAACAAGCTGAAATGATCGCACGCATCCAAGGAAGA
ACGAACCCCAAATATAAGTTTTTATTCAACGATAAAAGTCCAGTCGCACA
GTACTACCAACGACAACTGGAAAACATGAAAGAGAGTTCAAGTATCCCCT
CCTTATCCACCGCTACAAATTCATCAAGCCAGCCATCTGCTGTTGCTGGT
TCTTCAAGCGCATCCAGTTCAGGTGGATCATCTTCGATAAACTTGATGGC
AGATTTCGAACGTGCCAAAGCCCTGGTCAAAGCCAAAGCTGCAGCCATGA
AGGAAGGAGGAATTTCTGCTGTTTCGAGCGCTGCttctgaagaagaagaa
agacgaCAAAAAGCTATCGAAGAACAAAAAATGATGAACGAAATTTACAT
GAAAGTGATCACACAACAAATGGCGGCCGCTTCCGAAGCTAACAAGAAAC
GGAAAAGGAAACGTGATCCGGACAAACCGAAATACGAATACGACTCGGAT
GAAGATATAGAAGGGGGAACTTGGGAACACAAGAAAAGAACTCTTGAAAT
GCAGAAGACCGCTGGTAAGCTTTTCCAGGAATACTGTCTAGCCAGTAGAA
CCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAATTTCACTAAAAGAAA
AGGTCCAATCGCNTTAAATCTTTTCCAGGAATACTGTCTAGCCAGTAGAA
CCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAATTTCACTAAAAGaaa
aggtccaatctcaaaattttaaatttcaaaacaaaagaaatatcaaGTTT
TCTCAGAGTCCAATTTAGAGTATTTATTTTTTGC
Run BLAST on NCBI

transcript from alignment at scaffold_455:141964..158211+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066394 ID=TCONS_00066394|Name=TCONS_00066394|organism=Clytia hemisphaerica|type=transcript|length=16248bp|location=Sequence derived from alignment at scaffold_455:141964..158211+ (Clytia hemisphaerica)
GATCTTTTTCAGTGtaactaaaaagaaaatttacaaaaacaaacaagacA ATACAAACAACAAGAAGCATTTGGTTTGAAACTGACAAGGACATAAGTGG GCAAACCAAGGAATGTGTAGATACCCTTGAGGTTTCGGCAAATAACCAAG GACTGGCTGTACTATGATTGGATCCACGTGCAGCTGAGCAGGTACCTCAT ATTCTTCTCTGACTCGATTCATGATGAACCTGTTTAAAATCTTATTCTTG GTTTTCATCTGGCAACTCACCAGAGAAGAGGTTTCATTAAACCAAGGGAA TTCTCTACTCTGCTGCAAAACCCTGTCTAAGAATGAAATCTCCTTGTTCT CCTTTGCCCTTTCTCATCAGGAACACCGAAACTATCCATACAATCCATAC AAAATGAGCACAAGTGCAACACTTCAACAACTACCATTGATAATCAGTGG ATCGGTCGAATTAAACCCTGGACCAGCTTCGAAAGTGAAATATCCATGTG GCGAATATCAAAAAGCTGTCACTACAGGTGCTTCCATCGCTTGTGACCTT TGTAATCAATGGTTTCACCGCAAATGTTCATCAATGAGCGACCAAATTTA CAATTGTCATGTTAACGAGGAGAGTTTGGAGTGGCTTTGTCCAGGTTGTG CACTGGCAGATATTTCGAACAGTCTCTTTGACACCTCAATCTCTTCTTGC AGTTCCGCTTCAAGTATtgaaaacaatcttccaaagaAAAAAGTCAGTAA GCTTCGAATTGTTATCTGTAACTTTCAAAGTATTTACAACAAAAATGAAG AACTTTCAAATTATCTCATTACAAATGATATAGACATTTTGATTGGGACT GAAACACACCTATCTTGTAACATTCTTAACTCTGAGCTTATCCCAAAAAC AGGCTATCAAATTGTTCATCGGTGTGACCGTAATGATGGGTACGGAGGCG TTATCATCATCGCAAAGGAATCTTTGATCACTGAACCCATAAAGGCTTCT AACAGTCATCAAATAATCGCTGTAAAAGTGGAGACATTCCAGAAGCCCAT AATCATCTCATCTTGCTATCGATCACCAAACAGCTCAATTCAGGAAAACA ATGACCTTGTCCAATCAATAAACAACCTgtccaaaaaattcaaatcaaac cCTCAGTTTATCGGAGGAGATTTCAATCTACCAGATGTTGATTGGGAGTC ATACACAATTACTGGATCTCAATACCCTCGAGCACTGAATGAGCAATATC TTGAGGCATTTGACATAAACAGTCTTTCCCAAGCTGTCAATTTTCCAACC AGACAAAAATCTATCTTAGACCTACTCATTACCAACAGACCGTCCTTCAT CGAAAGCTGCAGACCAACACCAGGTTTTGGAGATCACCAGACAGCTGTTC TTGCTGACGTTTATTGCCACCCTAAAAGACAGCGACCTGTACAACGAAAA ATCTACCTCTGGAACCGTGCTAACTTCGACCAGATGAAGCAAGATGTAAG ACAAGCGTCAGACCAATTCTTGGAAAACGAAACAACCGATACACCGATCA ATAACTTGTGGTTAAAATTCAAAAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTCAATTCAGGAAAACAATGACCTTGTCC AATCAATAAACAACCTgtccaaaaaattcaaatcaaaccCTCAGTTTATC GGAGGAGATTTCAATCTACCAGATGTTGATTGGGAGTCATACACAATTAC TGGATCTCAATACCCTCAAGCACTGAATGAGCAATATCTTGAGGCATTTG ACATAAACAGTCTTTCCCAAGCTGTCAATTCTCCAACCAGACAAAAATCT ATCTTAGACCTACTCATTACCAACAGACCGTCCTTCATCAAAAGCTGCAG ACCAACACCAGGTTTTGGAGATCACCAGACAGCTGTTCTTGCTGACGTTT ATTGCCACCCTAAAAGACAGCGACCTGTACAACGAAAAATCTACCTCTGG AACCGTGCTAACTTCGACCAGATGAAGCAAGATGTAAGACAAGCGTCAGA CCAATTCTTGGAAAACGAAACAACCGATACACCGATCAATAACTTGTGGT TAaaattcaaaaatatcattACCACTGCTCAAGAAAGCAATGTACCGTGC AAAAATTCAACTAAACGATACAACCAACGGTGGTTTAACCAATCATGTAG ACGTGCCGTTCGAAAAAAGCAAAGATTATATCATAGATACAAACGCACAA AGCAATCAGCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGA TTGACTTGTAAACAAACTTGTGATAAATTTATCAACgacaattttttatc agaacacAAATCAAATCCGAAAAAAGTTCTACAGTTACATCAAATCTAAA AAGCAGGATAATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTT TACTGATGACACTCAAATTGCAAAAATCCTCAATAATCAATTTCTGAGTG TTTTTTCAGAAGATGACGGNCCAGAGGGAAAAGTAACATCCGGAATCCCA CAAGGATCGGTACTGGGACCCCTGCTGTTTAGTAGTATAGTATTGTTTAG TATATATAAATGACATATCACTAGCAGTCACATCCTCAGAGATAAGTCTT TTTGCTGATGACGCTCTACTTTACAAATCcatcaaatcaatcaaagatGC CAGAGATCTGCAAAATGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTA AATTCCTCAGTAATCTAAGTTCTTTTTTCTGCAATATTCAATTACCTCTT AATCCAAAGTGGTtgcctttttattaaattctagattttattatatttag acagattttattttattaccattttattttacattcaggAAATTGTACGT ATGTACCCTCTGAATTATTGAATAAAAGTAGAAGAAGAAGTACCGAGCCT ACCgatgcgtcggcagggtcctgtttTTTAGCTATATCTAACATACATCG TGTACATGAAATTTACACCCTTGAAACTCTTGAGATTCAGAAACCCGCTG GAAGGAATTGGGCCAGTTCCAGAATACACCTTTCCAGTAATTAAAACTCC CCGGAAATAATAATGTTACTACTCCACccattgtgtataaaattgtttgc aGTTTGGGGCAAGATAAACGAATCTGTCTTTGTCTGGGAGCtgaagggaa agtgggttttcagctttTAACTTGTGATAGCGatctttttttttggcaaa aaatttgtTCAGGGTTAGaaatagcctggagatccatgctatgatttctt attctatatactgatcgTACGCGCGTTTGGTTTAGCAACGCGAACGCAAA CTAccgatgtctaaacttttcaatatatctccagaactaacagacttttt gaaattctgtaaaaaggttcaagttcctgaatagttttactatttTCTGT GAAAAGatcataaccatcagtgaaatactcgttcatctatttaagattga agacaaaaattatcgaagaaaaataaaccttgagcacaaatgctttttta aacacttttttacaccgaaaaacaaataacctTCCCCCCctcaaacattg aagaagcctctactaattaaagtaaatgagataagataagataaaacctt aaaatcaaccagaatttacaaccttttgtccaaagcaaaagacgtgcttt tcccGTCGCCATCTTGTAttagaatgagaattattttcggttccagttca catggaaattttttcatccaatcagattgcgcaatttcacttttgctttc tctagtccaataagactgcaggatttgagtcatgtgacatctctattgaa aaatagagaaaaaacccgcacaaaataaaatagaaatacaggggggaCAC ACTagtggctacaggaactgaaagcaaacaactaaggccaatatttttgg gttttctgaaggacaaaaggtataggaagctttactgaaggagggataag gctggaactatctatttaaaagatatggacaaaaaatggCACTAAatggc acttttttgggtgataattaagattttacttagaaactttaattctctta cccccgtcctgcccccccccctgatatgagcaaggaaATCATGTTGAAAA Ttactactgaaaatttcagatcaaaacaaacaaaaaaagctggaaaaagc tggtttttgactgtttctgatcctaaggtgcttatttttatcatttttcc aggataaaaacatttaaaatgtcTTCGCTGACGGATCAAACTGAATATCT ACGAAAAAAGAAGGAAGAAATCCTTGCCAAAAAGAAAGCACAAGAAGAAC AGAAAAAGCAGGGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGAT GggagttttttagaaaaattcaaatccatacaaaatcaaaccaaaactCC AGACATTAAAAAAGAACCGCAAAGTACTGCTGCACCGATGGCGTTTGCGA ATGATGGAAGTTTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATC AAGCAGGAGCCTGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAG TAAAAAGACATCTAGATTCGATCAACGACCTTCATCTACTTCAACATCCG CCCAAATAATGTCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAAC GGTATGTccagatttttctttatttgttgttgtttcaGGCTAATATGTGA GATACaagatgttgtttttttttgctttgataACGATTTTAGATAAATTC ACTCTTACTCTTCTAGATACAAAAGCTTTATCTTTGGTATTTCAatcaca ttttattttaactttccttttactcttttgtgcttagcTGTTATGTGAAG CAGTTTTTGCAATCTTCAAATGAAAGTGAATAAGATTATGAGGGGGGGGG CTAAATCCAAGTAATTTTGCACTTTTGATGAAGGCTTTGAGNCAAGAtta tgagggggggggggctaaatcCAAGTAATTTTGCACTTTTGATGAAGGCT TTGAGGAAGAACTTTTAATGATGGGTCcatattttgaatgttttcgaTTG CTTGTTCCGTCCTCAAATTGCATTTTTGTTGAAACCCAATTAGGCACAAA AGAGTAATCATGCATTTCTTCCCATTCTTCTTTTTTGTACTTGATGAAAA GGAGGTATAAGTTTTATTTAGCACCCACCCAACCGCCCCAAGCCGATGAT TACGAAGTAGCACGCGAGTTGGCGGAGAAAGTTTACAAAGAAGGAAAACA AGCTGAAATGATCGCACGCATCCAAGGAAGAACGAACCCCAAATATAAGT ATGACTTTTTTGTCTAGTGTATATTTATGTAGTTGTGTGAAAGTATTTTT CTGACTGGACAAacatttttggcttttttattTACCTTGCTCCATGATTC CATACATCTCTGATTTAATTTAAGTTAGTTTTATTCTattaaattttttc gaaaagcATTTTTGGGCCAATTCCCCGTATACTTTACATACAGCAATGTc acttttcttttactttttcttccATCATTAGGTTTTTATTCAACGATAAA AGTCCAGTCGCACAGTACTACCAACGACAACTGGAAAACATGAAAGAGAG TTCGAGCATCCCCTCCTTATCCACCGCTACAAATTCATCAAGCCAGCCAT CTGCTGTTGCTGGTTCTTCAAGTAATTTTCACTATTGCTTTTATGGTTAT GGTTTAAAAGGGATAATcaaatggtttgagatatttaccCTGCATAAACC TTCAGTGGTCTTCAGTAAAACCtcgaagtatttttttttaaaactatttt ccgaagtcgagatatcacaatctgaaatttctaaaaatgggtTCTTACCT GTTCTTACGTCAAAATTGTTTTCTTGccgctaaaaatcaaaaacttgtaa cttgaaTATCTCGACTTTGAAAACTAGTTAGGCAAAGATATTTAGAGTTT TTTCTCGCGACAATAGAATGAATCCAAAtaccaaatatctcaaacctcTG ATTGTCCCTTTAAGTACCATATTTCTATTTGAATTAACAATTANATCAAA ACCCAAGACCTAAATGtagggggtagaaactatgatGATCTATAGTATCT CTGTTTTAAATGGCTGGTGAACTTTTTTTATGCATTTTCCCCAATTGGTA AAATTTATCTGAAACAAGAATGCTTGTGACTTTTGATAGTCCGatttaat tgcaaaaaatgtttttgcttcttttagaaaatcaaaaacgctatatttga atgtattttccattgaaaacttcgcgatttttagcggtttaatttgcgat tgcaaagaTTGAGCTTTTTTTATACTTATGCTACAACGCAAGgtcaagaa aaaagttaaatttcaaggcaaacggaaaagtcattcggaagatatgggac ctgAAATACCCATTGGTTAGCATTTTTCTGTGAAAcatcaaatctccaaa ttttaataaaaacgggggtagtgatgataaaacagtttttcaatcatata ttataacacattttacgatctttttacgataatgacctcatagccaaact gtgcatagtgttttgggaattagcttacttaaaaataacaaagaacAAAT AAGTTCAATGTGTCTTatcgtttcaataaaaacaatcaaatttgttttga aatgatacCAATAACGCCAATGCAGCAACACTGTCttaacactttccaac ttttaattggactgttcaaaaaagacaacataacccccgtttttagtaaa gATTTAGAGATTTGATGTTTCACAGAAAAATGCTACCAatgggtatttcg ggtcccatatcttccgaaggacttttttgtttgccttgaaattgaACAAC CTTCTTTGCCTAAGGCTGAACTACCACTAgtttaaaaatgaacgttatag cataaaaagaaaaaaagctcaatttttgcaatcgcaaatttaaccgctaa aaatcgggaatttttcaacaaaaaatacattcaaatatagcgcttttgat tctctaaaacaagcaaaaaaaaattttggaattatatttcacTATTAAAA TTTACAGActttcttgtttccactgccaattatatctggacagactttag tgtgTATTTGTGTAGTTAAACCCAAGGTGTGAAATTCCATTAGTATTTTT CTGAGTGGAGAAagatttttggcttttttggacctaccccggtgggctgt aggtcctataaattaacctctgttcgttcgttcgtccgttcgtccgttcg tccgttcgtccgttcgttactagctNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNtttttctgattttttgcagaaagat gcgtatttgcaatggtcaaaacatggccgagttcgatttttgagaaaaaa ttttttccggttgaaaatgccggaaatcgccgtctttgcagattttcatt atattttttccttgtatttcttcacacaaaaacactattgataacaatgc tcaccatcaagcatgattcaattgtcaataaaactgatttttgcgaccag aactttctattaatttttccctacaaccctNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgcatt ttcgctaaacgatatattttctgactgatttttttctcctcgcattgcta tctaactttcatcatcaggtaggtccattcagcatctagcttgttatttA CCTTACTCCATGATTCCATACATATCTATGAAGAGccattttctgagaaa aataggcaaaaatgggcAAGGTCAGGAAGTGATATTcctcatttttggat attttgttcagattaatgaaaaaaaacatcccctgaaaattttttcgaaa aattcctTCCGGTTGGTGAGATATGGCCCATTgaaatttcgatctttttg gCTATTTGGGTCTGCAAAATGGAAGAGCTTCTTtcatggctggaaccccc ccccctggcctgAGGTCGAGCAGCAATGGGTACCTGATTTTAGgctgtgg ctaggggggactaacccctaaattttttcagatggacctgggggctagat tctatgtttggtgatttttttctgaacttgtttttctttcatcatAAACT GCACTATGCAGAGTTGCTACGTCTGCCTGAAATGTCTGGAATTAAGTTAA AGTCTGGAAATGTCTGGAAAGTCTGAAAAGAGTCTGGAATTGGCATACTT GTCTAAAAAAGTCTGGAATTGACATTCATGTCTGGAAAAAAATATGGAAT TTGAAGGAAATAGTCCTGAACAAAGTCAAGTAAACTTTCTGGAAATAGGA AATTTTTATCCTGGCATTtgaaattcccaaaaatttaacCTTTAGTCATG TTTATTCTGTAATTTCTCATTCTGTTGTATTCATCAACCTGGCCTTTCAA ATGACCGTTAAGGAAAAACTAAAAACCTTCCTAATGGATAAAATGCCTGG AAAATATTGcgtattttgctaaaatttctgGAAAATCTTTGACATTTTCA GGCAACAAATCTGAAAAATATGGCTTTTGAGACTAAAAGTCTGGAATTTC CAACTTGGTAAACCTGTAGCAACCCTTCTATGGAATGTCTTCTGTGTTTC TGAGAAAACTGTGTGtgcaataagctaaactaactgttgtatttgtttga ttgtttgaaaaggattttcgaaaaaatatgtcattggcttaggggtcacc gaaaatatttggcaaccaggggttacctaaatcttaggggtcacctgaat tcctagggggcacctaaaacctgctgccaagccatgattctttgaaatga tttttaaCCCATTTTGAGCATAAAGAGGTACCCCCATTTCTTCATTTCTT GGAAATATGGGATAAGTTctacacaaaaaataaaaaacgaggTTCTGAAT ATTCCTCAGTGTCTAGAAATCATAGGCCAAAATCACACATTCGCCAAATT CCTGCCCTTTTTGAGATCAAATATCTTACTTGGGCCTCACTTCTACATGT ACAAGTTAAGATTCTCTGATAAACAGCTGAACTTATTTTCATTTCCACAA TTTCATGGGCCAACAATGGGTGTGGCCTCTGCcgccattttaaaatttta agtcCGAAATGGTCCCACTTTCGCGGTCTATAATGGCTGCGGCCCTCAct ttgacaaacttttttttcaaagaattagGTGCTATTGCCCTTCCTCTTTC CATATCTGAAAAGAAATTCATGGGCTCTAGTCTCTTTGAGTCAGAATAAG CCCTAGAAGTGAGTCTAGTCTACTAAGATTTCATGCCTGAAAACTCCTTA GCAACGGGTTGTTTACCCGTAGCAACGGCTCTTTCAATGCTTAGATGAAA GTGCTGTGATGTTTCTGTTTAGTTGGAAATGGCCAGACTTAATTCTGAAT CTTAAATAGGTACAATGCAAGGAAAAATAGCAcctattaaccctttaagt gccaatatGTCGTACATATCAGACACGGGCTATGTCGGacgccctcctgt aatgcccagtttgagttagaaatcgtcaaaATCGTCCAAAAATGAGGAAA ACTTAAAGACATCACTTCCTCACTTTGCCCGGATCTCTCAGAAAATGGCT CTTTAATATAAGTTAATTTTACTctatcaaattttttcgaaaatcatttt TGGGCCAATGCGATAAATTCCCATATACTTTATACAGCattgtcactttt ttttattttttcgttcatcACCAGGTTTTTATTCAACGATAAAAGTCCAG TCGCACAGTACTACCAACGAAAACTGGAAAACATGAAAGAGAGTTCAAGT ATCCCCTCCTTATCCACCGCTACAAATTCATCAAGCCAGCCATCTGCTGT TGCTGGTTCTTCAAGTAATTTTCACTATTGTTTTTATGGTTATGGTTTAA AAGGGATAGTcaaatggtttgagatatttaccCTGCATAAACCCTCAGTG GTTTTCAGTAAAACCTCGAACTATTTTCCGAAGTCGagatatcacaattt gaaatttctaaaaatgggttcttacatCAAAATTCACTTGTTTTCTTAGC TTTCTCTCGCAACAATAGAATGAATCCAAAtaccaaatatctcaaacctc TGATTGTCCCTTTAAGTACCACATTTCTATTTGAATTAACAATTAACATC TTTCCCAgaactttcttcttttcttcttttctatGAGGAAAAAATTGAGG ATTGTCATCTTTATTATTGATAaaggctacttagactacacaatatatat TGACcaacaatatttgacaatatctTTTTCGGACCGTATTGTACGAAGTA ATTAACAGGtgttctattataaaaaggaattttctttctgtaaacaatcc ctcTAAGttgttggaaaattgcaaatcaagctgacaatatattgcggaca ccttttcaatatattgtcggCACTctgcaatatatcatcaatatattgcc tgacaatatgttgtgtagtgtatgtaccTTTAGTTTAAGCTCGATAATTA ACTCTGTTAAAAGAATGCTTCATTCATCAATATCAATGCACAGATCCTTC AATTCTTCCCCTCAGGATGACCCTTATCATCTGTTCCCCAGATAATTGCC AGTGTATTTTATGTACAGTCAACTTACTCTAGTTCTAACTGCTATTACCT tactggaactaattttcgtgggaGTTAATATTCGCGGTCGAAAactaaaa tcagaaaaattgcattgcgcgggttttaattttcgcgtttttgccgtttt ttggacaaatttctttcattttcctagggatttttcaaatgtttgatgaa attggaaaaaattgtattgtatcaaaaacgctaaaattaattcccgcgaa aattagttccaataaggtattcagaatctttctataattcgaacaagttg GTCTCCCCCAGCTGTAAAGTGATTTAAAtgctctctgtaattcgaagaaa atttttcccatGAAAACGTTAGATATCTAAGTTGGACACTTTGCAAACAT TTACTTACACTTTTAGGTGTATTGATCAAAATTCAGCTTTGAAATCATTT CGCTATTCCTTTTGCTTTCTACCTTAGGCGCATCCAGTTCAGGTGGATCA TCTTCGATAAACTTGATGGCAGATTTCGAACGTGCCAAAGCCCTGGTCAA AGCCAAAGCTGCAGCCATGAAGGAAGGAGGAATTTCTGCTGTTTCGAGCG CTGCttctgaagaagaagaaagacgaCAAAAAGCTATCGAAGAACAAAAA ATGGTATGAGTGAGATAAAATAGACTCCCGCGCAGAACACTTATTCGCGT ATTCGAAATAGTTTATAATTCCCGTCTTAGGCTAAATTCTCTCTCAGTTA TTCCAAATTTTTATATACGGTAGTTAGTAAAAGAACGCAAAATTTTCAAT GACCTTTTATCAATCAAAAGGACAATGTTACTACAATCAAAGCACTTTTT GTCAACTCCCGACattaaagaaattgaaaattcgatggaaaaaaaaaagc ttttcagtCATTCGAGCccaattattttctttttagtcGTTTGTCATaat catagtccgtataaaaaactctGGTCTGGAAGTTTTAACTTTGTTATCTT TTTCCTATGTTAatttcaaaagatgaaaatggaTTTGCTGAGTTTTCGAT CACGTTACCCATcattcctcttgggattggtttaagatttaatcacatgg tCAAAAAGCGAGCAAAACTGATTTCTCAAACGCAAATTCAAATaagaaac aatgaaaagaaagaaaaggcttccagaccggagtttttttatacggacta tgtcATCATCTACTTTGCCTGAACGTCCCTCCTACCCTGCTAAATATCTT TGAAACGAAATTCTAAGTGATGTATCTGCTATTCTACGAAAAGTTTCTTT GGGTAACCCTTTGTTTGACTTTGAAATATAACTCGTTTGCTGTTTTTGGT TGAATAATTTGGGACTGAGTATATTGGGCTGATTTTAGTGTCTTGTAAGC TGAAGTTTCAGTATTTTTCTGGGAAAGAAAAGACAATGTCGATAAAGTGG AAATAATCATTCACTTGTAATTTATACCGGTAACTAATTTGTcaatatca aatcaatatcaattgaccttttcataaattacgccaCGACCAActcttac ctcgttttcaaaatattgccaTGGTAATCGATTCCCGGAGGAGTTCactc tatttataaaagtaacaCTTGAAAGCTCTagggatttaatcaccttggta atggtttcaaaacgaggcagtcgttgcactcaaaataattataGAAAGTC TTCGCCGCTGTTTTGTTGGGACgtgatggagtttttacaagctcttattt gatttggttggtcgttaacgagtcatttttattacttcgaatgaccaatt attaaagtatctcataaaaactcaatctCATCTGGTTTCGTTTGTAGATG AACGAAATTTACATGAAAGTGATCACACAACAAATGGCGGCCGCTTCCGA AGCTAACAAGAAACGGAAAAGGAAACGTGATCCGGACAAACCGAAATACG AATACGACTCGGATGAAGATATAGAAGGGGGAACTTGGGAACACAAGAAA AGAACTCTTGAAATGCAGAAGACCGCTGGTAAGCTTTTCCAGGAATACTG TCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAAT TTCACTAAAAGAAAAGGTCCAATCGCNTTAAATCTTTTCCAGGAATACTG TCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAAT TTCACTAAAAGaaaaggtccaatctcaaaattttaaatttcaaaacaaaa gaaatatcaaGTTTTCTCAGAGTCCAATTTAGAGTATTTATTTTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041558XLOC_041558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066394-exon-scaffold_455-1491911889:141964..142154TCONS_00066394-exon-scaffold_455-1491911889:141964..142154Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:141964..142154TCONS_00066394-exon-scaffold_455-1510915933:141964..142154Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:141964..142154TCONS_00066394-exon-scaffold_455-1575043694:141964..142154Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:147916..148364TCONS_00066394-exon-scaffold_455-1491911889:147916..148364Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:147916..148364TCONS_00066394-exon-scaffold_455-1510915933:147916..148364Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:147916..148364TCONS_00066394-exon-scaffold_455-1575043694:147916..148364Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:148885..149011TCONS_00066394-exon-scaffold_455-1491911889:148885..149011Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:148885..149011TCONS_00066394-exon-scaffold_455-1510915933:148885..149011Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:148885..149011TCONS_00066394-exon-scaffold_455-1575043694:148885..149011Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:149245..149302TCONS_00066394-exon-scaffold_455-1491911889:149245..149302Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:149245..149302TCONS_00066394-exon-scaffold_455-1510915933:149245..149302Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:149245..149302TCONS_00066394-exon-scaffold_455-1575043694:149245..149302Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:155096..155177TCONS_00066394-exon-scaffold_455-1491911889:155096..155177Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:155096..155177TCONS_00066394-exon-scaffold_455-1510915933:155096..155177Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:155096..155177TCONS_00066394-exon-scaffold_455-1575043694:155096..155177Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:156391..156566TCONS_00066394-exon-scaffold_455-1491911889:156391..156566Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:156391..156566TCONS_00066394-exon-scaffold_455-1510915933:156391..156566Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:156391..156566TCONS_00066394-exon-scaffold_455-1575043694:156391..156566Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1491911889:157761..158211TCONS_00066394-exon-scaffold_455-1491911889:157761..158211Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1510915933:157761..158211TCONS_00066394-exon-scaffold_455-1510915933:157761..158211Clytia hemisphaericaexon
TCONS_00066394-exon-scaffold_455-1575043694:157761..158211TCONS_00066394-exon-scaffold_455-1575043694:157761..158211Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:141964..158211 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.148547 0.494055 0 0 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top