TCONS_00066256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066256
Unique NameTCONS_00066256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4762

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066256 ID=TCONS_00066256|Name=TCONS_00066256|organism=Clytia hemisphaerica|type=transcript|length=4762bp
caagcaagaaatAAACCAAAAATGAGGATTGGACTCCAACATTTGCCCCT
GGCGACTGTAATCCTTTCACCCTTCATAGTTTCATACAATGGATATGGTT
TATTCATGACAACATTCACAATGCTTTTATGCTTTTTGATTTACTTTGTC
ACCAATTATTACTTGACTTTTAAAAGAGTTGGAGCAAAGAAAGATCGTAT
TGTTTTGAATACGTTGCCTATATCTCACTATGTGGAAAAAGCAAGATGGT
GTTTAGATAAATCAGGCATTCCTTATACTGAAGAAAAGGACATTGGAGTC
TTTTGGTTCATACTGGCTGGACGAATGTTACCAACTCTTCGAAATGAAAC
TCAAAatATCACTATTCCCAACACGTCCGATATTTGTAAATACTTGTATG
GACACACGGTACAAACACAAGGAGAAGAAAAAGCAGAGTTTCTGAAACCT
TCCACTAAGGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGTTTGTT
GTTGAGAAGATATGCTTATTATCATGTAAGAATATCNGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTAAGCTGCTTTATAAC
TCTTATATCATTTAATTTGTACTTCGAATGTATCGagaacatcgaatttg
aaaGTGGACCAAGGAAAAGCATATTCTAGCGTCTTATGCTGCTTAATAGC
TCTTTTATCATGTATATTCAAGCATATTCTAGCTTTTTAAGCTGCTTTAT
AACTCTTATAGCATGTAATTTTTACCTAGAATGTTTTGAGAACATCGAAT
CTGAAAGCAGACCAATGAAAAGCATATTCTAGCTTCTTAATAACTCTTAT
ATCATGTacacattttttcataagaaaaaactatataagaacataaggct
tcgatgaccaaaatgttaagaacaagttaagaacattttaaggctttggg
gactctaaaatacccaatttcttaggatggaaaaaaatgctcaaaaacgg
tgaaaataagaatatgttaagaacatttttaggcttaacactaaaaaagt
taagaccatcaaaggcttcaaaaatttaggatgttcttataaaaaaaaga
ggtGCTGTATATCATGTAATTTGTACTTTAAAATGTATGAAAAACAGAAC
ACCAATTTTGAATTACCTTAATTTGATTATGAAATCtgaaggccggtctc
cactttcgctcgaaatgagcgaaaactgtttttgtaaggtcattgttCGG
TTTAAAAACGAAGCAATTTCATTGGGCAAATCTGACGTGAcggtttgaaa
aagttgaacttctTTCAACGTTTCATTTTTTCGCTCGAAACTTGTTTAAT
GACGTAATTTTTTCTGTAGGTAAATACGATTGACAACAAAAAATGGAGCG
AAAGTGAAGATCGGCCCTAAATTTTGAGTATGCGAAAAAAGTGATTTATA
GTTTTCAGATGAACGCATATTTGATTATATTTGCGACATTCTGGCTTTTC
ATTTAGTCTTCAATGATTTTTATAGAGCTCCCCTCAaaataagcggagtg
aaatgcGATGGCCATGGAAGTGGTCAAAGGCGACAGCGTTTCAAACCAGG
GATTCGCAGTTCGAATTCCcgctgcttccaatttttgttaaattcatAGT
AATCTAAAAATCCTAGATTATTGGGCTGAGCAatatatcgactctatcta
tgcgataaaaaaaaactacattaaaagttgaaaaaggaACGAGTAATCTA
ATCTTGAGAAAGCTAAATTTcaggaaatatcttttggattTTAACCTTTT
GGACGATGCATG
Run BLAST on NCBI

protein sequence of TCONS_00066256-protein

>TCONS_00066256-protein ID=TCONS_00066256-protein|Name=TCONS_00066256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
QARNKPKMRIGLQHLPLATVILSPFIVSYNGYGLFMTTFTMLLCFLIYFV
TNYYLTFKRVGAKKDRIVLNTLPISHYVEKARWCLDKSGIPYTEEKDIGV
FWFILAGRMLPTLRNETQNITIPNTSDICKYLYGHTVQTQGEEKAEFLKP
STKGFELEKKIDRIGLLLRRYAYYHVRIXAAL
Run BLAST on NCBI

transcript from alignment at scaffold_451:1082123..1090716-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066256 ID=TCONS_00066256|Name=TCONS_00066256|organism=Clytia hemisphaerica|type=transcript|length=8594bp|location=Sequence derived from alignment at scaffold_451:1082123..1090716- (Clytia hemisphaerica)
CAAGCAAGAAATAAACCAAAAATGAGGATTGGACTCCAACATTTGCCCCT
GGCGACTGTAATCCTTTCACCCTTCATAGTTTCATACAATGGATATGGTT
TATTCATGACAACATTCACAATGCTTTTATGCTTTTTGATTTACTTTGTC
ACCAATTATTACTTGACTTTGTGAGTATTAATTTTTTTTCATTTTGTGTT
TTTGAGATAAAAAGATTCAACAATGGTATAATTTCATTTTTATAATATAA
TAAAAATGATACAACTGTTGCATCTGTTTTATCTCAAAATTGTTCACTTG
CAATAATGTTGTGTTTTTTGAGATAAAAAGTTTCAACAATGGTATTATTT
CATTTTTATAATATAGTAAAAATGATACAACTGTTGCATCTGTTTTATCT
CAAAATTGTTCACTTGCAACAATGTTGTGTTTTTTGAGATAAAAAGATTC
AACAATGGTATTATTTTCATTTTTATAATATAGTAAAAATGATACAACTG
TTGCATTTTATCTCAAAATTGTTCACTTGCAACAATGTTGTGTTTTTTGA
GATAAAAAGTTTTAACAATGGTATAATTTTCATTTTTATAATATAGTAAA
AATGATACAACTGTTGCATCTGTTTATCTCAAAATTGTTCACTTGCAACA
ATGTTGTGTTTTTTGAGATAAAAAGTTTTAACAATGGTATAATTTTCATT
TTTATAATATAGTAAAAATGATACAACTGTTGCATCTGTTTATCTCAAAA
TTGTTCACTTGCAACAATGTTGTGTTTTTTGAGATAAAAAGTTTTAACAA
TGGTATAATTTTCATTTTTATAATATAGTAAAAATGATACAACTGTTGCA
TCTGTTTATCTCAAAATTGTTCACTTGCAACAATGTTGTGTTTTTTGAGA
TAAAAAGTTTTAACAATGGTATAATTTTCATTTTTATAATATAGTAAAAA
TGATACAATTGTTGCATCTGTTTTATTTCAAAATTGCTTACTTGCAAAAA
TGTTGTGTTTTTGGCCAATTACTTTGTTGTTCTTTCTAGAAAACTTTCTT
GAAGACTTTCTGATAAATAAATCTATTGTTTTTCAAGCCAAGACCCTACC
CACATTTTGTTCATGTATTTAAGTGGTACAATAAATAAGTAAGAAAGTGT
GTGTAAAGATCGAATTTGATGTTACCTCAAGTAGATTAATTTACGCAAGG
ATTTTATTTTCGTAAGTTTTTTTAAAAATTTGCGAAATTTAATACCGTAA
ACGGCCATAACCAATTCAAGAAAGTAAATCCCATTATTAGTTAGAATTCT
TTTGAAAAAAATTGTCTCACAAAAATATCTGCTTGTGAAAATTTAAAATC
CACTTGAAACGTATCTCATGGAAGCTAAAATAAAATTTGTTCTCTATGTT
GCAGATATTTATTTTTCTAATCCAAAAAATGCATGAACTGGGAATAATTT
GACCATCTATTACTTTCAGTAAAAGAGTTGGAGCAAAGAAAGATCGTATT
GTTTTGAATACGTTGCCTATATCTCACTATGTGGAAAAAGCAAGATGGTG
TTTAGATAAATCAGGTACTTTTTATTAGGTTTACATAAGTTATTTAATTT
TAAAATTAAGATCTTTCAATTTAAGTCACTGATTTTCAAAAATTCTCGAT
TGTATATAATTCTTAACTGTTTCTCGAACTGTTTCAATTTATATGTTTAT
TGGGCTGTTCTATTAAAAATCCATACAGGGGGTGGACGAACCTTTTTAAT
TCCAAAACAAACTTGGTTAAATGTGTGGATGCCCCCCTCCTGGAATCTAG
AAAATGGGAAAGTTTCCAATAAAACCCTTGGAAAAACACTCCTTGTGAAC
CCCTGGAAATTCTTCCCAGATTACCCCTTGGAAGTATTCGTCTACCCCTA
TTGTATGGATATATAATGGAATGGGCTTTTCCAGAAAAAAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGG
GTGGAGGATATAACAATTTTCAGTGATTTGCCCCCCGGACGAAATGACTT
TTGGCCCCCCGGACAGAGCAGACTTACCCATCGGACAAGGCAAATTGTGA
AGATTTTTCGCTACCCCCGGACAATATATCCTCCATCCCCCATGCACGGA
CATTTTCTGGAAGAACCTAATGGCCCAAAGTGGTCCAAATGGAACTTGAC
ATGAAAATTATTTCTTCATTCGTTTTTGTTTAAGTATTTTTCGATTGAAA
TGACCTGTTCTGGACATTATCTTTTAGGCATTCCTTATACTGAAGAAAAG
GACATTGGAGTCTTTTGGTTCATACTGGCTGGACGAATGTTACCAACTCT
TCGAAATGAAACTCAAAGTCAGTAATTTGTTACTTTCTCGATTTTCTTAT
TCAATTTTTATTTAAGGGGCTCACCTTTGATATTAACGAGATTATGTATC
GAAAATATTCTACGGGTACGGTCGCGGGGCTGTCCATATGGGTCGCCACC
AAAGGCGACATGTCGTTGTCTACTTTGCTCTGTACGGAAAAAACACTAAA
ACACCGTATAAGCAAAGTCGACATAATGCCGTACGTCAAATATGAAACTT
GCTTTCACCCGCCATTAATTTCCTTACTCGCCATTTCCCTCGTCACATTA
ACCGTAGCTGTAGAGAATTCCAGATACATAATCTCGCTATATTCTTCGCC
AACACGTAGTCCAAAAATGTAACAACATTCATTTTTTATTTGGAAATCCT
GTTGGGTTAATGTCTCTAACAACTACAATCAAGGTCATAATATTTGAGAA
AAAGTTATTCGCCTGGAAGTTTTGAAACCACAATCGATTTGTAAGTGCTC
TAAAGTAGGTTAGATGGGTAGAGGTTTTAACTCTGAGTTTTAACGCTAGA
CTTAGATAGAACCTTAGGATCTGAGGATCCAAAAGTTCAAAAATAGTCTA
ACGAGGCTCAGAATATAGTCTGGAAGTCTGCCAACCCATCCCAAAATTGA
AATATTCGAGGTGTATTGTGACATTCTATTTGAATACTGTTTGCAAATTC
CGAAATTTAAACCTATTTTCTAGTCTTTTTGAAGGTTACATAAATATGCC
AAGGCGAGACCAATTTGATTTGTTGTTCTACGGGCAGATCGTTAGCAAAA
CATGAGTCGGTTGGTCGGTAAAATAAAAATAAGATTTTCATTAATAAAGA
AAAGTAATCAGGCTTTAAGTAATATTTTGAAATAATCTTGGTCGAAAATT
CATCATTCATCTTTGATGGTAAAATCTTACGTAAATAGAATTCATGATTA
GATTCGTGAATAGATTCTTTTTCAACAACTTTCTTTAAGTGTAAATTTTT
TGAATGACTATTAGAAAGTAGAAATTTGTGGCACAGGAAATTTAATATTA
TTACTTTTTCGTTTGCAGCAAATGCTGGGTCGGTTGCGCCCGTAGAACAA
CAAATCAAATTGGTCTCACCTAAATTGTTTTTTAAATATTGATATCAGTA
TATTTTAGTTTCCTGTTAAGGTCGCTACCCACTCAGCATTTTATGTTCGG
CGAACAAGGCGCACGGCTCGAGCGTTTTGGTCGCTAAACGCTTTTCTCAT
TCCACTGATCCAAAATAAAGGGGAGATATGCTGCAAATGTTTTCTTTTTT
CATTTGTTGAAATTCTTTTGCACACGGTACAAGAAAGTTAAATGTCTATC
CTGGTTGGCTAATTAAAAAAGAACAATAGGGAAGCTGCACATCCTAGCGA
AAAATGTTGAAAAGCTTCAACTCTTGTTGAGCTCAAAGCGAAACCTTTGA
AGGCTTGGTTTATGTAATTTATACAATAATTAAGCCGTGCGCCTTGTTCG
CCGACCATAAAATACCGAGTTTATGTATCGGAGGATATCGAGGGCAACGG
TAAGTGAAATCGATACAAAACAAAGTCGATAGTGGACGTACGGCTTTATA
TCGCTTTTGCTCACCTAAACAGTCGACGGAATTTTGATGTTTTTACCGTC
GTCGAGCAAAGTGGACGATGATTTAGGAGACATGTCAACTTTGCTTTATA
TAGTCCCCCTCTATTTATCTCGAATACATAAACTCGCTAATGCTGAGTGG
GTAGCGACCTTTAAAGGATTTATTTTTGATTTTTCAGATATCACTATTCC
CAACACGTCCGATATTTGTAAATACTTGTATGGACACACGGTACAAACAC
AAGGAGAAGAAAAAGCAGAGTTTCTGAAACCTTCCACTAAGGGATTTGAA
TTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGAGAAGATATGCTTA
TTATCATGTAAGAATATCNGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTAAGCTGCTTTATAACTCTTATATCATTTAATTT
GTACTTCGAATGTATCGAGAACATCGAATTTGAAAGTGGACCAAGGAAAA
GCATATTCTAGCGTCTTATGCTGCTTAATAGCTCTTTTATCATGTATATT
CAAGCATATTCTAGCTTTTTAAGCTGCTTTATAACTCTTATAGCATGTAA
TTTTTACCTAGAATGTTTTGAGAACATCGAATCTGAAAGCAGACCAATGA
AAAGCATATTCTAGCTTCTTAATAACTCTTATATCATGTACACATTTTTT
CATAAGAAAAAACTATATAAGAACATAAGGCTTCGATGACCAAAATGTTA
AGAACAAGTTAAGAACATTTTAAGGCTTTGGGGACTCTAAAATACCCAAT
TTCTTAGGATGGAAAAAAATGCTCAAAAACGGTGAAAATAAGAATATGTT
AAGAACATTTTTAGGCTTAACACTAAAAAAGTTAAGACCATCAAAGGCTT
CAAAAATTTAGGATGTTCTTATAAAAAAAAGAGGTGCTGTATATCATGTA
ATTTGTACTTTAAAATGTATGAAAAACAGAACACCAATTTTGAATTACCT
TAATTTGATTATGAAATCTGAAGGCCGGTCTCCACTTTCGCTCGAAATGA
GCGAAAACTGTTTTTGTAAGGTCATTGTTCGGTTTAAAAACGAAGCAATT
TCATTGGGCAAATCTGACGTGACGGTTTGAAAAAGTTGAACTTCTTTCAA
CGTTTCATTTTTTCGCTCGAAACTTGTTTAATGACGTAATTTTTTCTGTA
GGTAAATACGATTGACAACAAAAAATGGAGCGAAAGTGAAGATCGGCCCT
AAATTTTGAGTATGCGAAAAAAGTGATTTATAGTTTTCAGATGAACGCAT
ATTTGATTATATTTGCGACATTCTGGCTTTTCATTTAGTCTTCAATGATT
TTTATAGAGCTCCCCTCAAAATAAGCGGAGTGAAATGCGATGGCCATGGA
AGTGGTCAAAGGCGACAGCGTTTCAAACCAGGGATTCGCAGTTCGAATTC
CCGCTGCTTCCAATTTTTGTTAAATTCATAGTAATCTAAAAATCCTAGAT
TATTGGGCTGAGCAATATATCGACTCTATCTATGCGATAAAAAAAAACTA
CATTAAAAGTTGAAAAAGGAACGAGTAATCTAATCTTGAGAAAGCTAAAT
TTCAGGAAATATCTTTTGGATTTTAACCTTTTGGACGATGCATG

Coding sequence (CDS) from alignment at scaffold_451:1082123..1090716-

>TCONS_00066256 ID=TCONS_00066256|Name=TCONS_00066256|organism=Clytia hemisphaerica|type=CDS|length=2196bp|location=Sequence derived from alignment at scaffold_451:1082123..1090716- (Clytia hemisphaerica)
ATATCACTATTCCCAACACGTCCGATATTTGTAAATACTTGTATGGACAC
ACGGTACAAACACAAGGAGAAGAAAAAGCAGAGTTTCTGAAACCTTCCAC
TAAGGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGA
GAAGATATGCTTATTATCATGTAAGAATATCNGCTGCTTTATAAGCATTC
CTTATACTGAAGAAAAGGACATTGGAGTCTTTTGGTTCATACTGGCTGGA
CGAATGTTACCAACTCTTCGAAATGAAACTCAAATAAAAGAGTTGGAGCA
AAGAAAGATCGTATTGTTTTGAATACGTTGCCTATATCTCACTATGTGGA
AAAAGCAAGATGGTGTTTAGATAAATCAGCAAGCAAGAAATAAACCAAAA
ATGAGGATTGGACTCCAACATTTGCCCCTGGCGACTGTAATCCTTTCACC
CTTCATAGTTTCATACAATGGATATGGTTTATTCATGACAACATTCACAA
TGCTTTTATGCTTTTTGATTTACTTTGTCACCAATTATTACTTGACTTTA
TATCACTATTCCCAACACGTCCGATATTTGTAAATACTTGTATGGACACA
CGGTACAAACACAAGGAGAAGAAAAAGCAGAGTTTCTGAAACCTTCCACT
AAGGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGAG
AAGATATGCTTATTATCATGTAAGAATATCNGCTGCTTTATAAGCATTCC
TTATACTGAAGAAAAGGACATTGGAGTCTTTTGGTTCATACTGGCTGGAC
GAATGTTACCAACTCTTCGAAATGAAACTCAAATAAAAGAGTTGGAGCAA
AGAAAGATCGTATTGTTTTGAATACGTTGCCTATATCTCACTATGTGGAA
AAAGCAAGATGGTGTTTAGATAAATCAGCAAGCAAGAAATAAACCAAAAA
TGAGGATTGGACTCCAACATTTGCCCCTGGCGACTGTAATCCTTTCACCC
TTCATAGTTTCATACAATGGATATGGTTTATTCATGACAACATTCACAAT
GCTTTTATGCTTTTTGATTTACTTTGTCACCAATTATTACTTGACTTTAT
ATCACTATTCCCAACACGTCCGATATTTGTAAATACTTGTATGGACACAC
GGTACAAACACAAGGAGAAGAAAAAGCAGAGTTTCTGAAACCTTCCACTA
AGGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGAGA
AGATATGCTTATTATCATGTAAGAATATCNGCTGCTTTATAAGCATTCCT
TATACTGAAGAAAAGGACATTGGAGTCTTTTGGTTCATACTGGCTGGACG
AATGTTACCAACTCTTCGAAATGAAACTCAAATAAAAGAGTTGGAGCAAA
GAAAGATCGTATTGTTTTGAATACGTTGCCTATATCTCACTATGTGGAAA
AAGCAAGATGGTGTTTAGATAAATCAGCAAGCAAGAAATAAACCAAAAAT
GAGGATTGGACTCCAACATTTGCCCCTGGCGACTGTAATCCTTTCACCCT
TCATAGTTTCATACAATGGATATGGTTTATTCATGACAACATTCACAATG
CTTTTATGCTTTTTGATTTACTTTGTCACCAATTATTACTTGACTTTATA
TCACTATTCCCAACACGTCCGATATTTGTAAATACTTGTATGGACACACG
GTACAAACACAAGGAGAAGAAAAAGCAGAGTTTCTGAAACCTTCCACTAA
GGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGAGAA
GATATGCTTATTATCATGTAAGAATATCNGCTGCTTTATAAGCATTCCTT
ATACTGAAGAAAAGGACATTGGAGTCTTTTGGTTCATACTGGCTGGACGA
ATGTTACCAACTCTTCGAAATGAAACTCAAATAAAAGAGTTGGAGCAAAG
AAAGATCGTATTGTTTTGAATACGTTGCCTATATCTCACTATGTGGAAAA
AGCAAGATGGTGTTTAGATAAATCAGCAAGCAAGAAATAAACCAAAAATG
AGGATTGGACTCCAACATTTGCCCCTGGCGACTGTAATCCTTTCACCCTT
CATAGTTTCATACAATGGATATGGTTTATTCATGACAACATTCACAATGC
TTTTATGCTTTTTGATTTACTTTGTCACCAATTATTACTTGACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041461XLOC_041461Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066256-exon-scaffold_451-1575043694:1090547..1090716TCONS_00066256-exon-scaffold_451-1575043694:1090547..1090716Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1575043694:1089153..1089247TCONS_00066256-exon-scaffold_451-1575043694:1089153..1089247Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1575043694:1088300..1088389TCONS_00066256-exon-scaffold_451-1575043694:1088300..1088389Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1575043694:1082123..1086529TCONS_00066256-exon-scaffold_451-1575043694:1082123..1086529Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1510915933:1090547..1090716TCONS_00066256-exon-scaffold_451-1510915933:1090547..1090716Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1510915933:1089153..1089247TCONS_00066256-exon-scaffold_451-1510915933:1089153..1089247Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1510915933:1088300..1088389TCONS_00066256-exon-scaffold_451-1510915933:1088300..1088389Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1510915933:1082123..1086529TCONS_00066256-exon-scaffold_451-1510915933:1082123..1086529Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1491911889:1090547..1090716TCONS_00066256-exon-scaffold_451-1491911889:1090547..1090716Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1491911889:1089153..1089247TCONS_00066256-exon-scaffold_451-1491911889:1089153..1089247Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1491911889:1088300..1088389TCONS_00066256-exon-scaffold_451-1491911889:1088300..1088389Clytia hemisphaericaexon
TCONS_00066256-exon-scaffold_451-1491911889:1082123..1086529TCONS_00066256-exon-scaffold_451-1491911889:1082123..1086529Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066256-proteinTCONS_00066256-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:1082123..1090716 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08025	1.33559	0.839132	0.989311	0.451858	0.332526	1.38635	1.87018	1.97919	2.33395	3.08342	1.41786	1.91225	1.81551	3.98662	3.98507	2.87176	2.29037	1.11888	1.57756	1.34108	1.51887	2.6728	2.56275	2.13176	2.09792	3.02966	2.3334	5.23709	4.02479
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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