TCONS_00065968 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065968
Unique NameTCONS_00065968
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1591

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065968 ID=TCONS_00065968|Name=TCONS_00065968|organism=Clytia hemisphaerica|type=transcript|length=1591bp
tcATGGCTTTTATGCAATGGAAAACGTCATACAGAAAGACACATTCATGG
TCTCTAAATCCCAACCTTCAACAAGCTTAAGCCCATTCTGTGAGGGCCCT
GTTATTAAGAAATGGAATAAAGTCTTTGCGAGAGCCATCGAATCATAACA
AAGATGACGTCATGACTTATTTAATGGGAACCAATAAATAACTCGTCCCA
GTTCCCTTCCTCCTTCCATTCTTGACAATTCTTCTTGGTTACCTTGGAGA
CGACATTTATTTGTTAAAGGCATAATGGTAACCAAAGCTGAACAACGTTA
CAGGAGTGAGTTGGACTTATGCCGGCGTGAGTTGGAAACCCTGCGTGCAG
AGCTTGACGAGCAGGAAGAACAAACGTTAAAACAGAAACGCGAGATCAAT
GATTTACGCAACACAAATGATACCCTGGAATCGGATGTCAACCGTCTCCA
GAAACAGAAAAAACGTATGCAAAATGAGTTGGACCAAATTAACGCCATTT
TTGATACGGAGAAAAGTGAGATTGCCGATTTGCAGGCCAAATTGAAACGG
GCTAACAAAATTGTTGCCGAGGAACGCCGAATTCGTGAACAATTACAAGA
AGCTAAATCAGATCTCATTATCGAGAAAACAAACCTCGAAAACAAGATGG
AAACTTTAGAGGACGATAAGCGGGCATTAGACCGTCAAGTGACAGACGGT
GAGATCGCCCGCAAGGCGCTCCGTCTAGAATGCGAGAACCTTGGTGACGC
ACGGGATAACGCTAAATCGATGATAAACAATTTGGAGAAGGATAAAAGAC
ATGCTGATATCTTGTTGGAAGAAGCACGAAAAACGAACGCTAGTTTTGAA
TCACAACTCGGAGAAGTAGAACAAAACTACATGACTCTTCAAGGACAAAA
CCAAGCGAACAAGGAACAGTATGCAAGAGACATCTCACGAAAAGACGATA
AAGTCGAAGAATTGAAACGAGCTGTCGATAAAGCTGAACGTGATTTGAAG
GTGACCTTagaagaagagaaaaagaagCGTGAACAAATGATGGCATCACG
TAAAGGATTAGAATCACAAATCACTGGTCTACAAATTGAACTGGATGAGG
CAAACAGACGAAACGATGATCAACAAAAAGTCATCCGCAAATACCAAACT
CAACTTGCTCAATTGAAAGACTTACAAATGGAGTTGGGAGAAATGAACGA
ACTGAAAGAAAGCTTATTACGAGAACTGAAGGAGATGGAAAAGAAAGCAA
GATCAGCTCAATCGGAAAAAGACTCTGTTATCGCCAACCTTCAACAGAGC
GAACNGAGATCAGCTCAATCGGAAAAAAACTCTGTTATCGCCAACCTTCA
ACAGAGCGAACGCGCTAAACGCGCGGCGGAAGACGAAGTGGTTGAGATGC
AACAAGAAGTGGAAGCTCAAAAAAGTTTACTCAGACAACAGGCTTTGGAC
GAGAAACGAATCCTTGATGATAAATATAACGAACTGAAGATGGATTATGA
TGATGAAAAACAACGAGCTGATGAAATGGATGTTAAAGCACGCAAATACC
AGAAAGAAGCAGAAGCAGCCAGCAGTAACTATGCCAACGAA
Run BLAST on NCBI

transcript from alignment at scaffold_448:457922..473614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065968 ID=TCONS_00065968|Name=TCONS_00065968|organism=Clytia hemisphaerica|type=transcript|length=15693bp|location=Sequence derived from alignment at scaffold_448:457922..473614- (Clytia hemisphaerica)
TCATGGCTTTTATGCAATGGAAAACGTCATACAGAAAGACACATTCATGG
TCTCTAAATCCCAACCTTCAACAAGCTTAAGCCCATTCTGTGAGGGCCCT
GTTATTAAGAAATGGAATAAAGTCTTTGCGAGAGCCATCGAATCATAACA
AAGATGACGTCATGACTTATTTAATGGTATGTAACATTTTTTATTTTTCT
CGTGAAATGTGTCATTTTTGAGCAGGGTCTTTTGAGGACCTTATTATAGA
CTTACTATATGAATGAATAGATGTCGGCCTTTCAGCGTCTATTTTTGTTA
CATCAGTTCCGTTTATATCGATTTTCAAGAGAGAATGGGGGAGAATCCAA
ATAGAGTCATTCCAACTTCGGACCCTCGTTCTGTTAATTTCTCGCTTATT
TTACTAACTAGCTTACCGGGGTACGCCCTTTTGTTTTGCTTAACTTATCC
CCGGAAAAACTTGCTTATAGCCACTTTGCAATGGAAAAAGACCGAGACTC
TGGTTAGGTGAAAAAGTAACTTCAATTTTTTAGGCGGTCAGTCCAATGGC
CGTGTATTTTCCAGGCACTTTGTTCGCAGCAGAAAAATCATTTTTGCCGG
TATGTCCGGAGAAGGTAGTGGAAAGAAACCGGAAAATTTAAGCCATCCCA
TGGGATCTCGAGCTCTGTTTGCTAGGTTCTTTCAGACTCTCAATTAAGGG
AGGTTGAAAATAATCCCTTAAAAATTTATCTTTAATATAACAGCCAGTAA
GTGCTTGAGCCGAGTAAATTTCCCCTTATCCTGTGTTATTGCTAGGACAT
AGTGGTATAGTGGTTCGATATCCACCGTGTCACTAAGATTCGCTTGGCAA
GTGAATATACCTTAGCCCGGGTCGACCAATGCCATTACTCTGATACAAGA
GTGTGGGTAGATTAGACTGGTATTGAGATGTGCTGCGGCATAAGGTTCGG
CTTCGCGTGAATATCGCTCTCCCAGTGTCGTTTGAGTCGTCATGGTTAAC
ACCAAAGTTATGGCCAACTCATTTAGATTTTTGGAGCATTGGAATGTGGC
TAGTCTTGGAATGTCTTTTTTTACTTGACCACTTCCAAACCTTTCTGAAC
AGAAACCTAGGAAATTGCTTAGGAAATCTGCAAATCTGAGCCTTCATATG
CTTATAAGCGTTATGCTTATAAAAAAATGCATGTAAATTAGAATCTCCTT
GTTTAATATTGAAAGAATTTTTAAAGCCAACGAAAATTTGAAAAAAAATA
AGAAACAGCCAAGCCTCGCGCCTGTCAAGTCGCAGTGTCTGTCAGCGCTG
TGATTCCTACTCCTTCGGGAGTAGGACCCATCCCGAATGATTCGGAGGGC
ATATATCTATCTATTTCCAGGGCAAAACTGAATTCTTACTTTTCCTCTAT
TTTTCATTTTTGTTAGGGTTGCTCATATTTTATTTTTAGGGTTGTCATCA
TGTTGTCACCTTTAAAAAATATTTTCCACTTTAGTTATACTTTAAATTTA
AATTAATGATCTTTTTTTTCTCTCAAATCATCATTTAGACAGCTTTTAGT
CAGCTTTTTATGTCTAGTTTTAATGCGCTAATCTAAAGAAGACGGGGGTG
AAATTTAATTGTTTACATATTTTAAAATGGTTTGAGTCCTGGAGCTATGG
AATTTTGAATATAAAATTTTGAGTTTTCAATGTGACGTCTTTTTTTTAGT
AAAACGTCTCTCAAGGCTAATGGCGAATGGTTATTCCAAAACCTACCCAT
CTTTATCAAACTTTCACACTGTTTTCAACGGTAACAAAAATGTTCAACCT
TTGTTTCTACGGTCGTTTAGATAGATGGACATATGCCCTCCGAATCATTC
GGGATGGGTCCTGCGACTTGACAGACGCGAGCTGCCAAGCCATGACGTAT
ACCATGGCACTCGAATGACACAGGGAGTGTCAATGCTTACGCGAGTACCG
CGGCGCGTCACAATGCCAGTCTAATCTACCCACACTCTTGTATCTGGACA
AAGGTATATTCACTTGCCAAGCGAATCGTAGTGACACGATGGGTATCGAC
CTCGGGCCTTCCAGGTGGTAGTCAAGGATGATAACCACTATACCACTACG
GCCGTTTAAAAATATTTAAAAAGACTCATCCTTTGACGAAAAAGTTTTTC
TTAAGGAAGAATAGAGGACTGTAAACTAGACTAAGCTGATAGAGGATCGC
TCAATGGTACCGGGGCTGAAAAGGTAGATATTGGTGCCATGAATACCTTT
GTTGCCCTTTTCCCTCATAATTTGATATTTACCCTCTTGGATAATCAAAA
TGTTGAGGAGATTATAATCCTCTTTATAATCATTAAAAAGATAATCAGAT
GGCTTGAGATGTCTAATCTGGGAATTCTTTCTCATAGTTCTGAACAAAAC
CTTAAAATATTTTTGCCTGGCTATTTTTCGAAAGTCAAGATATCCACTTT
ACAAGTTTTCTTACAAGTTTTGGACTAAAAGAAACAACTCAAAAAACAAT
AGAATCTCAACGTAAGAGCTATGTAAGAACTCATTTTTACAAATTTTAAA
ATGTGATATCTCGACTTTGGAAGATAATTGACTTCACAGAATAATTGACT
TCACTGATACCTATTATTATCCATATAGCGGTCATTAAGTAAGTCATTTA
AAGGTTCAATCGGCGGGCGGTATTGAAAGGTTTTTTGACTCAAATTGTCA
TACCCGCGCTGAGGAAACTAAAGTAAAGCACCAGGCTTCAGAGGGCTAAA
ATATCATTAACGGCCCGGGTATAGGGCAATAACGTCATTTGCGGCCCGCT
CGGAATTGAATTGAAGTCGTTGCATTGAAGCGAAGAGACNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNACTAAACTAACGTCAGAAAAAAACACTTTTTGGTCATTTGCGGCCCG
CTCGCAAGGTGCTAAAAATTTGTTGAAGACATTGCATTGAAGCGAAAAGA
ATTTGTTGAGGCTAGAAAAAAACGTTGTTTGAATGTCCGATATGGATAAT
AATAGTAATAGCGTTAAGTTTTCGTTCGTTGTTGTCATTAATTCTGCCCT
TGCAATTTGATTATTAGCCCTCTAGTGCCATTTGCGCCCTCCCCTCGCGT
CGGGCCCAAATGACACTATCGGGCGAATAATCAAACTACGTGGGCAGAAA
ATAACAACAGCGACCTTAAACTGAACGCTATTGTTATATTCCATGATATT
GTATTAAAACTGTTTGAAAGGTTTTGTAACTTTTATTATCACCTATATGT
GAAGTATCAAAATTTAGCCCCCGGAAATTAAAGTCATTTTTAAGAAGGCG
TTCAGCTAGTGATTAGCCTTTCTAATCAGAGGTGTAGCCCAAATTTTTCT
TTCGTAACGAAATAGTTGATTTCATTTATTTTTTCAAAAAAACTCATCTC
AACATCGAAAGAGAAGTTTATGAAATTTTTACAGTCTTATTTTTAATACG
TTTGGTTGAGTATATATGGTTCATTGGTTAACAGATGTTTTAGGTATCTG
TTGACTGAGATATACTTTGAGATTTGTTTTTTCGCAGCTCACTCTAGATT
ATGGCAGTCTTTTCAAATGACTATCTATTTATTTAAAAGATAGTTGATTG
ATTTAATTATGTCTGCTTAATAGTGTTCAGGATTTAATCTAGATCTCTTT
CTCTGCATGTCGGAGAATGTTTGCAGATTATTTCTTTTTTATCACTCAGT
TTTTCCTGTTATCCTGTTTAATTATAAGAACTTTTTGTTGCGATTACAAT
TCGAATAGCCTAACTAAATTAATGTTACTTAATAACTTCAATGCAAGTTT
ATCTCACTTTTTTCACAAGAGTGTTCTCCCACGCTTGTGTTCTCGATAAT
GTCGTTCGAAAGAAGTTTTCCTTGTATAGACCTTTCAATGAATTACTTTT
AGTGCAATGACTGCCTCGTTTTGAAACCGTTACCAAGTAATTCAATTTGT
TCAATTCCTTGAGCCTTCAAGTGATACTTTCATAAATATAGTAACTTCCT
ATGAACTCTTTAATCAATTACCATAGCAATTTTTTGAAAACGAGGTAAGT
GTTGCTCGTGACGTAATTCATCAAAAGGTCTATTCATTACCAGACTCTTC
AAAAGCTGACCCGGAGGGTTGATATATTTATTTCTAAGATGCCTTGATCC
TACCCTTTATAAGTTGAACCAGGCCTGATGCTTGCTGCAAACCTAAAGTT
ACCATTCGTCTTGTTTTTTGTTCTCCTCTAAGTACAGTTGAGATTCTCTA
ATTCGACGTTCTATTATTCGATAATGTTGAAAGCCACTGTCAACAAGAAA
CAATCATAAACGACACTCTACTATTCGATACGCTACCTTATTTATTCGAT
GAAAATCCGATTCCCCTTGAAAATCGAATTAGAGAGCTGCAACTCAGTTT
TACAGTTAATGAACTTGCACTGCTTTACCTTCCTTAATTTATGATCAGCT
CTTATTAAAAAATTTCCGCTTAGATCTAAACTATGCCTAAAAAGTTTTGT
TATCTTATCAGTTACTGCATCGTGTGGTATTAATTCCCTCCATTTGTCCC
TATGTTTCCCTCTAAAATTAAGAAGTTGGAATATTTGACTCCCCAAAAGA
TCAGATTCTTACTACTGCTCCATTTGGGGCATGTAAGAATCCAGTTTCCG
ATCTCTATTGTGTATTTTTGTATCCTTATCTTTCCCGACTTTGATATCGA
TAAAAAGACAATAAATCTTGGCCATCAAATAACAATTTCAGTTCGTTTTC
TTTTCTAGGGAACCAATAAATAACTCGTCCCAGTTCCCTTCCTCCTTCCA
TTCTTGACAATTCTTCTTGGTTACCTTGGAGACGACATTTATTTGTTAAA
GGCATAATGGTAACCAAAGCTGAACAACGTTACAGGAGTGAGGTATGTTT
TTTTTGGTGTCAAAATTCAGTTAAGTATTTTTTGATGTCTTGGCTATTTT
TTTCTTAGACGAAAAACGTTGCTTCGACGGCTTTTTACGTATCTGAGAGT
CTAAACTCGGCAACACATGAGGGGTTAAAAGTTTTGGTCTAGCACAAGTA
TTATTATCAATACAATACACGTTTTTTCTGTGTTGACTCAATATTAAAAG
GTTTGTGATTTAAATTGCTTAAATTGACATTTAAATTGACAGTTAATTTT
AGAAGCAAGTTTAAAACAGGACCCTTTGATTTCGTCTTTTGTTTTCCATT
CAATTCATATATTACTATTGTAGTATCCAGACTTATCATAGTAATGCAAA
TCACAAGTTTTGCCTGGTACACAGTGTTTACTTAAAGTAGGTCTCAATAA
AAAGTTATAGTTAGAGTACTTTTAACGTTTTTAGGATGATATAAGGCTGT
ACATTTACATTCACTTCGCTTTAAGTGTGCACTCATTTGCTATAATGTTG
AAACCACTTTCAGGTTAGGAGAATAAGTTTTATTACATGGACTTGTTATT
CGCATGGTAGCAAAAAAGAAGCACGCATAAACCTAAAGCGAATAGACTTT
AGATCACATTTACAATAATAGTGGGTATGCCCGTATAATTACGACTATTT
GTGGATAATGTAACAGACTCGGTGGAATTACAAAGGATGATTGGTCTGAA
CTTACATGTCATGGGGTAGAGGTAGTACCCTCCAAACAGCGGTCGTCTTT
TTAAAAGCGGGGGAGATTAGGGGGGCCAAAATGCTCAGATCGTTAATATG
AATTCCGTACTTTGATAACAGATTTTTCCTAGCAAGGGGGCGCTAGAATC
CTTGTTTTTATTAAGTTTGACAAGCTGCTGCACTGTGCTCACCAGCCTAT
TATGTATTTTGTCCATTCTCCTGATTTTGCCTTAAAGCTAACCTTAATAC
TATCATTTTAAGAACTGGAATTGTTTTTCTATTATATAAAACGATTACTT
GTATAGGAAAAATGTGTCATCTTCTGCTTTACTTCTGTATATTTTCTTAT
AAAAAGAATCATGAGATCATGGATTTATAATAGATGCTAATTTTCAAGTA
TACTATTATCATATCATTCATTATGATTTTGCTTTATAATGGACACAGCA
ATCTTATTAAGTTCCATTCTCTGCCAAATCTACAGAACTGTTTTAAAAGG
TCTCTTTTGATTGGCTAAAACACTCTTGTGCTGAGCTTCTCAACCAATGA
GAATGTGATTTTCAACAAATTTTTGCTACTCAAGAGTAGGCTGGTCTTTG
ATAGTCACTAGAGGATTTTTAAAAGATTGAGTTATATAGGCTTACATTTA
TGGTTGATATGCTGTCTTTGATTAACAGTCTAAACCAATCAGAATTGCTC
TCTTAAAAATCTTAGCCTCAGAACTATTCTTGTGTGTATCCTTTTAAGGT
ATTTTAGTTCATTGAATGATAATTTTGTCAATGCAAAAAAAAAATACCAG
CTGATGCTCCACTCAGTATATTATCTTCTCGATTCTGTCTGTTAGTTTTT
TTAGCTCACAGCTGTTGTGTTTTGTCATCTTGAAAACTCTTGTTTCCTTA
ATATTTGTTGTTGTTTTGGTCAATTGTTTGAAAACATGGCTGATAGTGAC
GTTCTCTCGAGAAGCAAAGGCCGCAAAGGAGCTAAGGTAAGTTTTGAACC
AATCTCGTACCCAGAGCCACTTCCACCACTTTTTGATTTTTTACTAATGG
ACGTGATTTAAACTACTTTTCGTGAGCACTATCAGAATCATGAAGAAAGC
AAACTAAGGAACTGGGTTTTAGTTTTCTGTGTTTCGATTGAGTGAAAGGG
TGTCCTGGTGTACCAAGAGAAATGTTTAGAATGAGGTCAAAAGTTGTACC
TGTAATTCTCTTAATAGCGTCAGGAAATTGAAGATAGGATTGTTTATAAA
ACATTTTGTATGAAGTAGGAACTACAGATTACAGACCAATTTTTGAATTA
CTTAAGGCTAACTACATTCGAAAAATACTGATCTGCAATCAGACCCGAAG
TCAAATCTAACATAGTCTGAATTGCAGACCTCTATAGATATACTGCCTTT
ATAAGAAACTCTTTTCGCTAGAGGATGAGCAGATCTAACATCTTACTCGA
CACAACCGACACAACACAATTATGCAACGTTCGACCTTTACTCGCAAACA
CTGTATTGAAGAAGAAGAATGAGTCTACTAGGGTTGTGATTCGTTCAATT
AAGCGAAAACACGTCAATAATTGGTCCATAAATCTTGTCAGCTACCAAAA
TTAATTCGATCCCAAGTACTCATCTCGTGATATAAGCAACATGAAAAATT
ATGATGCTAATGACATCTTGATTCTTATAAGAAATATTGCAGACTTTATA
CCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAACTGATTTTTTCGAAA
TCTAAGAATTAAGAAACAACAATTGCTATTCTATCAGAAAGAAGAAAGAT
AAACTTAAATTTTGATGGGTCATTTATTAAATTCGATTCATGTGATCAAA
AGTTATGCTCAATTGAATAAAAAAGTTACTTTCAGAAAGTGCCCGAAAAC
GTTAAAAATCGACCTGTTATCTCTTTCTGGAAATCAAGAGGGTTGGACTT
TTAAGGTTGGCTTAAAACGTTTAAGCACTTCATCCAAACTTAAGACAAGC
AAAGTTTGTCACTAGAAACAAAATAACGTCTTCTACTTTATGATGATGAA
ATATCTCTCAGATTTCAAAGCACAACACATACCTCTAGCTATCTGGAACT
TTTTTGATATCATTAACCCTATGTAATGAAATTATTAGAGATAAATCTTC
AACCTTTCTCAAGTGAAGCCTTAAAATCTGCGCCGCATTTAGAATAACGG
ATTAAATCTATAGCGCTTTCTTTGTTTTCACGTGGCATATTTTTCGAAAT
CTGGCGATAGATTTTACTTTCAATCAAGCGTTCGTGTGAAAACCACGCGG
GTCACGCATTTAGAATGGGAAATAAGTGGCTTCATTTCCCATCAAGGAGT
TTCGTGTCTAGCCCTTTCGGGCTTGGAAGTCAATGGTAATACCGTAGAAT
CTTAACTAATATCTAATTTTCAGCGAGATGGATATTTTAGTACTAAATTT
TGGCTTGGTGACTAAAATTATGACCGACTAAACTTTGGGTTGACTAAAAA
TTTGGGCCAAATCAAAAGTTTATAATTAAGCTTTCCTTAACTTTCCATAT
CGGTATTACTTTAACAAAGTTCGGTCTTAATTATTAGTCGGCCCTTAGTG
ACTAAATTTTGATGAGGTGACTAAAATTAGGGCCGGCTAAGTTTTGGCCG
ATAAGGTAGCCAAAGGCTAGAGTCGAATTTCCTATGCAGGATTTGAAGTC
ACTTATTTTTAACATAAAATACACGACCCGCGTGTTTTTCAAACAAATGC
TTGGTTGGAAGTTTTCGTTAAGTTTAGAATGAAATATCGATTATGATCGA
TATCGAACGATTTTATCGATTACGACCTTTAGGCGATTTTCCTCTCCTCA
TATAGGTCTCGTAAAGGAATATCATCGGCTGGCTTAAATTAAGTCTTTGA
GTCTTTTGAATTTTGAGTACTAAATTTAGATAATATTACATAATTATCGA
GAGAGTTATACTTTCACAATCCGANAGTACTAAATTTAGATAACATTTCG
TAATTCATGAGAGGGTTATACTTTCACAATCCGATTATTATTATTTTATC
CGGGAATCTAAATCATCTATTTTTCAATGCAAGGATCGAGTGACAAACAA
TGTCAATACATCTCAGCTTACAATGATAATCATTTTGATTTTTGACTTTT
CTCGTGAGATCTACTAGTTTAATCAAATCGACATAAGTACTGATTTTTAG
TGTTAAATCAAATCAATAGCACAGCCAACGACAAGCCTTTTGAATGTCCG
GGCGAAGGTAGGCTATTATAATAGCTACCTACTATCTAACACCCGTCTTA
CACTCACTACCTAGTTTTTTTGCGAATTAATCTCGCGGCTTTTTTCCTGA
ATATTGATATTATCCCCGTTTCGACTTATTTCCCCGATTTGGGAATACGA
AAAATGACTGTCCTACAGTCTTGGCGAAAAAAAATTTGCTTGCCTTTCTT
GATCTTATATAGGCTGATATAATAGTTTCAAACAGAAGAGACTTTCAGAG
ACATTTTGTTACGCTTGTTTTCATACAAAAAGGGTCATACCTTTTTTTAA
CCTTTGAGGCTTAATTTCTCGTATAGACGCAAAAGAAAATGAACTCTAAC
ACATATTTTGTGTGGAGAGCTCGTCAAATAATATACAGTTTCGTAGATAG
AGAGTTAAGTCTAACTTAAGCTATCAAAAACTTCATCGCAGAGGCACTTT
ATGCAAACTTTTATACAAAAAATATTGAGCGCGATTTTAATCAATTTAAA
TCGATATAGAGAAAAAATTTTAAGTCGATTGAGAAAAGTATTTTTGGTTA
CAACTTGTAAGCTTAAGGAGATACATAATTTCTTTATAATAGACCATCTG
TTGGTGATATATGGAGTTGTAGAATTTGAAACGAGATGAAAAAAATGTTT
ATTAGATCTAGAATCACGGACAAAAATTATTGAGACTGTTTGAGTTTTTT
TATTCCCTGCAGGATAGCTATTTTTCTTGATTTTTTTCCACCTCAAATTT
TTTTCGGGGAGCTTGAATGCTAAACTAAGATAAACCTATGACTACTCCTA
GATGGTATAGGATGCCTTTGCTGCCAGCGAAATAGACTCTCGAGCAGTTA
TTGTTGCTAGGTTTATGATATGTAAATCCTTTTTTTGCACTTTTTCTATT
GTCTTTAGGTGTGAAAAAAAGACTGGGACGGTTTTAGGGTGGTAAAACGG
ACAAATAAATGCCCGCGCGGCAATTGGAGGCTACAGTCAATAAGGTGTAT
TCCAGTCTTAATAATTTCTGTCCGTGATTTTAAAAGACGCAAGAACGCGG
CTTTGCGTGATTTTGTGATGAGTAAACACTTATATAATGACCGTGAAAAC
TCGGTAATCCTAAGAAAGCTTACTGGAGAGTATTTACGAAATGTTAGCCT
GGAAACTGATTCACGTCAAGGGCCTGGGCCTAAATTTGTAAGTGATTGTT
ATGTTAGTAGACTTGTTGTTGATTCTGTTTGGTGTAAAATGAAGGGCCTA
CCTTGGATAATAAACCTTTCTTAGTATTATGGTCAGTAAATAACACAGCT
TGGGAGTGGTCAAAAAGGGGAAAGGGGCCCACAACTTGGCTATTTACTGT
CCATTTCTAGTATTCAGAATAAGAGAAATCTTAGGTTTTGACTTCGGATT
ATTATCTTTTTTGACAATTGAAAGTATGCTAGCGTTGATTAGAAGCTCCG
ATAAACTTTTCTTAAAAAAAACATATTTTGAAATTGACTATTTTCTCTTT
CCATCCATAGTCGTTTGCCAGTATGAGCTAGAAGCTGTGGAAAACTTTTC
TTAGTGCTAAGTAAATTCGGAATAGCGGGATAAATAAAATCTTATTATGT
TCTCTTTACATAGCCGTTAGTTATATCGACGTGAATTACAAGCACCGTGA
AAAACTTTTCCCAGTGATTAGTGAAATCGGAATAATTGGATTCTAAAATC
GGATCATCTTCTCTCCCTTCATATTTAGACTTTTCTTGGTGATTACTAAA
ATCGGGAAAATCGTATTCTAAAATCGGATTATTTTTCTCTCTTCGTAGTT
GGACTTATGCCGGCGTGAGTTGGAAACCCTGCGTGCAGAGCTTGACGAGC
AGGAAGAACAAACGTTAAAACAGAAACGCGAGATCAATGATTTACGCAAC
ACAAATGATACCCTGGAATCGGATGTCAACCGTCTCCAGAAACAGAAAAA
ACGTATGCAAAATGAGTTGGACCAAATTAACGCCATTTTTGATACGGAGA
AAAGTGAGATTGCCGATTTGCAGGCCAAATTGAAACGGGCTAACAAAGTA
AGTTGTGTAATGGTGAAAATCCTTTCTCGGTGTTGATCGAAATTCTCGCC
CTAGGAAATACAAAGTCGTTAGGTCGTTTTCTTTAAGAAATACTAAACAC
AGGACAGGAATGGACCAGGAATTGTAGTTGTGGAGTTTTAGTCCGAACGA
GCTATTGTTTTATTTCGAATTACAGAAATATTCAAATAATGGCTCGAATT
AGGGAGAGTTGAGTGTAAAAGTTTTCAAAACTAATTTTGACTTTTTTTCG
ACTTATAATTTTAGTATATACCTCATCTCTTCATTCCGGTATTCATTCTT
GTTTAGATTGTTGCCGAGGAACGCCGAATTCGTGAACAATTACAAGAAGC
TAAATCAGATCTCATTATCGAGAAAACAAACCTCGAAAACAAGGTATAAA
GATTTCCCAAGGTCATATTCTCTCCGGGCCCTCCTTATCAATATTGTAGT
TATAGTGAACCATGCATGAATTATAAGATTTAATATTCTAAATCAATACA
AATTTTTACTGCCAGATCTGTCAAATCTTTCAGACATTGGATATTTACTA
AAATCTTTCCAAGTCGATTTTACGTTATGTATTAATTTTTGTAAGCCATT
CCTTTAAACTTACCTTTTTATAGATGGAAACTTTAGAGGACGATAAGCGG
GCATTAGACCGTCAAGTGACAGACGGTGAGATCGCCCGCAAGGCGCTCCG
TCTAGAATGCGAGAACCTTGGTGACGCACGGGATAACGCTAAATCGATGA
TAAACAATTTGGAGAAGGATAAAAGACATGCTGATATCTTGTTGGAAGAA
GCACGAAAAACGAACGCTAGTTTTGAATCACAACTCGGAGAAGTAGAACA
AAACTACATGACTCTTCAAGGTAAATCTATACTATCTAGAACTGAACATT
ACCGAGTTTATGTATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTA
ATTTGGCTAGATCCTAACCAGCCGAAGACGACAGTAAATCAGTACTTTTA
CCGTCCTCGATTTTGCGGAACTGCGAGTTATCCCAAATCGCTTCAGTCAC
TCTACCATCCTCAAAAGTGCAAAACATAAATTCGCTATTACATGATGTTG
CAGAATAGATTTGGATTCAAATTTAACAAGAAATTGGTAAAAGTTAGGTG
ATTGACTGGCTCGGATACAGAGAGAGGTTATAACCAATGGAGGAGAGTGA
ACTTTATTACCGTATTACCTTATATGGAAACTAATTACTCTCCGTGAATA
AGATAGCCTACCTCCTGTATCCGACCCTGATTGACGATGAAGAAATCTAT
ACCTTCGAAATGGTTAACATTAAACAAAGAACTCATATTTTTCAAAAAAG
CTATGTCGACGTTTAATATGAATGGCATAGAGTACAAAAAACCTTTTTAC
ATTTCTAGGACAAAACCAAGCGAACAAGGAACAGTATGCAAGAGACATCT
CACGAAAAGACGATAAAGTCGAAGAATTGAAACGAGCTGTNCCAAAATGG
TTAACAATTAACATTAAGCAAAGAACTCATATTTTTCAAAAAAGCTATGT
CGACGTTTAATATGAATGGCATAGAGTAGAAAAAGCCTTTTTACATTTCT
AGGACAAAACCAAGCAAACAAGGAACAGTATGCAAGAGACATCTCACGAA
AAGACGATAAAGTCGAAGAATTGAAACGAGCTGTCGATAAAGCTGTAAGT
TTACCCCCTATTCATCGCTTGTTTCTAGTATTTTGTTACCATTCTAGCCA
CCATTCAATGCTTAAGTAGTAAGTAAGTCTGCGACCGCAGCCGGAGGCGA
CCCGAAGGCTCCTCTTTCGATAACTATCTACCCGAAGGTAGGGGAGGGCG
CCACTCTTTCTCCCTGGATTGCTCCATTTACCCTTTATCCTTCTCTTAAT
TGCTGAGCATCCAGCAGAGAGGCATCAAGTACCATTTTGGTATGACCCAG
CTGGAGATTGAACCCACAACCTCGCGCACCGTAGTTGGATACTCTACCAC
TGCACCACGGTCGCATTATATGCTTAAAGGCCAGGGTAACTGGTCCAGCA
TTTCATCCAATATACCATTTTTTCAAATGTTTGGTGAAATGTTGAACTGA
TTTGTGGCAATATAAAATTTTCAACAAAAAACGAAAATTAAATTAAATTA
AAACGAAGAAAAAAACGTGGTTGCTGGGCATCAAACATTTGATCCAACAT
TTTCGGCAAGACCTGATCTTTAGTTTCTCATCCAATATTGGAAAATAATG
TTGGATTGAATGTTGGTCTGGCTTACTCTTTCCTTTAAATATAAAACTGA
ATTATTTTGTATATTTACCATTATTAGGAACGTGATTTGAAGGTGACCTT
AGAAGAAGAGAAAAAGAAGCGTGAACAAATGATGGCATCACGTAAAGGAT
TAGAATCACAAATCACTGGTCTACAAATTGAACTGGATGAGGCAAACAGA
CGAAACGATGATCAACAAAAAGTCATCCGCAAATACCAAGTAAGATATGA
CAAACAGTTTTTGTAAAGAACATTTTGCCTTTTAATTCCTTCAGTACTGT
GCAAAATTTAAAGATTGTTTCATCATAGCCGCTGTGCGTCAACTTCAAAT
AAAATTTTCTTGGCTTTGGCAAAAGCAAAATAGGTTATGTTAGGGTTCGG
TTGAAAGCTCTTTTCAATATTTACTATTTTGAATTAGGTCTTCAATCAAA
ATTACTTGTAATGAAAGCTTATTAAATACTGTTCCAAAAAAAAAAAAATC
TGACAGTCTGCTCATAAAGCATATAAGATACGACGAAAAGTAATACCTCG
TTGAAAAGATAATTTTAGGGCTTTAAAATAATTTACTTGTATTTCAAACC
AATTCTTAGTTCCCGTTAGGTAAAACACTTTCTATAATTCGAACAAATTA
GACCTCCAGTTGAGTTCGAATTAGCGAGATTTAATCGAAGTATACGTTTC
TCTCATTTTCAGACTCAACTTGCTCAATTGAAAGACTTACAAATGGAGTT
GGGAGAAATGAACGAACTGAAAGAAAGCTTATTACGAGAACTGAAGGAGA
TGGAAAAGAAAGCAAGATCAGCTCAATCGGAAAAAGACTCTGTTATCGCC
AACCTTCAACAGAGCGAACNGAGATCAGCTCAATCGGAAAAAAACTCTGT
TATCGCCAACCTTCAACAGAGCGAACGCGCTAAACGCGCGGTAAGTAAGA
TCTGATTTTAGTCTAACATGCTAGACAACTAATTCAGACATGGAAAGGAC
AAATTGTACTGTAAGTTGGTCTAATATGCAAATCTAATATCGACATCCCT
CGTCTGATTCCGACACCCTTCTTTAAGAGACAGGAATAATATGAAAGCTT
GAATCGCTGATTGAAAAAGGATTATTCCTCACTGACCACTAAGCAAAGAA
AAACAGTTTCAACCTTTCTATCAATTTTTAGCTGATAAAAAGGGTTTCGG
GATTAGATGAGGGATGTCGACATTAGACCAAATTACGGTTGCATAAAAAC
TGATACTATCCCGTTACAATTATAGTATTATTATTATAAGACAACGATAT
TGCTGTCTAATATAATCTAGACTTTCTGTCTCCCGGTGTTTTCAGTTTTT
ATCCCGAAAATGAAGACATCGAGTTGATTCTAGTCGGCTCACTGCTGACT
TTTGTCAAAAATCGAGGGAGGACAAGAAAGAAAGTCAACCGTCTAAACTA
GAAATAAGAAAATATGACGTGTATTCAGATTTGTAGACTTCTATATGATA
GGCATGTACACATGATCACAGTGCAGGCCGTTTTGGTTTAGCTTATATAA
CGGCCCATAAATGCTCTCGGCTTTTATTTGCTTCTATGGGAACTATTTGT
GTTTTTAAAATCCCCCCTCCATAAGCCTTAGAAGGACTTCTTACCCTAAT
TTTTATTTCATTCCAAGTTGAATCTCGAGTTTTTGTGATCAAACCTGTTT
CTTGACATTCTTCTTTTCATTCACGCTAGGCGGAAGACGAAGTGGTTGAG
ATGCAACAAGAAGTGGAAGCTCAAAAAAGTTTACTCAGACAACAGGCTTT
GGACGAGAAACGAATCCTTGATGATAAATATAACGAACTGAAGATGGATT
ATGATGATGAAAAACAACGAGCTGATGAAATGGATGTTAAAGTAAGTTTC
ACCGAAAAGCCTGTTAGAAAAGATTGAATGATCGAGACATCCCTAAAAAG
TTTCCCATACTAAAGCTTGTTGGAAAAGTTTGAATGATCGAGACATCCCT
GACTCGCAATTACAGTCTCACTATTTATCAATATTACCTAGAAATAACAT
AGGAAAAGACTTAAAACTAAAAGTAAAATTGTTGTTTAACGGATTTCCGT
TTCAGTCAAGTATGTATAGATGCTTTTCCGCTTTAAAATTCTGCATAGTT
CCCAAAATTTCAAAAAACTTATGGTAATTTGCTGTGTAAAATCCATTTTT
CGTCTCTGACGAAAAACCATGCTTTGGCCACTGCATTTTACTTGCAGATG
TTTAAATTTAACATCCCTAGGAAAAGAGTTAGTTTACAACTTACATAGAA
ATTTTTTTCATACAATGGAGCCTCTTTGACTGGAATATCTCCTTAACTCG
AACACGTTTTCTTGTCCTTTCAGTTAACAATGGCTTATAAAACTTACTCC
ATAACTCCAATTTTTTTTACTTCTAACCCTCCTTTCTAGGCACGCAAATA
CCAGAAAGAAGCAGAAGCAGCCAGCAGTAACTATGCCAACGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041322XLOC_041322Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065968-exon-scaffold_448-1575043694:473439..473614TCONS_00065968-exon-scaffold_448-1575043694:473439..473614Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:468673..468806TCONS_00065968-exon-scaffold_448-1575043694:468673..468806Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:462668..462916TCONS_00065968-exon-scaffold_448-1575043694:462668..462916Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:462272..462358TCONS_00065968-exon-scaffold_448-1575043694:462272..462358Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:461795..462041TCONS_00065968-exon-scaffold_448-1575043694:461795..462041Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:461219..461256TCONS_00065968-exon-scaffold_448-1575043694:461219..461256Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:460971..461024TCONS_00065968-exon-scaffold_448-1575043694:460971..461024Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:460176..460337TCONS_00065968-exon-scaffold_448-1575043694:460176..460337Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:459475..459702TCONS_00065968-exon-scaffold_448-1575043694:459475..459702Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:458524..458685TCONS_00065968-exon-scaffold_448-1575043694:458524..458685Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1575043694:457922..457975TCONS_00065968-exon-scaffold_448-1575043694:457922..457975Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:473439..473614TCONS_00065968-exon-scaffold_448-1510915933:473439..473614Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:468673..468806TCONS_00065968-exon-scaffold_448-1510915933:468673..468806Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:462668..462916TCONS_00065968-exon-scaffold_448-1510915933:462668..462916Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:462272..462358TCONS_00065968-exon-scaffold_448-1510915933:462272..462358Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:461795..462041TCONS_00065968-exon-scaffold_448-1510915933:461795..462041Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:461219..461256TCONS_00065968-exon-scaffold_448-1510915933:461219..461256Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:460971..461024TCONS_00065968-exon-scaffold_448-1510915933:460971..461024Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:460176..460337TCONS_00065968-exon-scaffold_448-1510915933:460176..460337Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:459475..459702TCONS_00065968-exon-scaffold_448-1510915933:459475..459702Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:458524..458685TCONS_00065968-exon-scaffold_448-1510915933:458524..458685Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1510915933:457922..457975TCONS_00065968-exon-scaffold_448-1510915933:457922..457975Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:473439..473614TCONS_00065968-exon-scaffold_448-1491911889:473439..473614Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:468673..468806TCONS_00065968-exon-scaffold_448-1491911889:468673..468806Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:462668..462916TCONS_00065968-exon-scaffold_448-1491911889:462668..462916Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:462272..462358TCONS_00065968-exon-scaffold_448-1491911889:462272..462358Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:461795..462041TCONS_00065968-exon-scaffold_448-1491911889:461795..462041Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:461219..461256TCONS_00065968-exon-scaffold_448-1491911889:461219..461256Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:460971..461024TCONS_00065968-exon-scaffold_448-1491911889:460971..461024Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:460176..460337TCONS_00065968-exon-scaffold_448-1491911889:460176..460337Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:459475..459702TCONS_00065968-exon-scaffold_448-1491911889:459475..459702Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:458524..458685TCONS_00065968-exon-scaffold_448-1491911889:458524..458685Clytia hemisphaericaexon
TCONS_00065968-exon-scaffold_448-1491911889:457922..457975TCONS_00065968-exon-scaffold_448-1491911889:457922..457975Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:457922..473614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	9.40117e-09	0	0.194431	0.637041	0	1.73669	0.408237	0.478712	0	0.0207688	8.44992	7.4725	0.052467	1.02685e-06	35.6451	39.4685	14.0068	10.6888	0	0	0	0	0.138029	0.260875	0	0	0	0
Blast
[Close]
BLAST of TCONS_00065968 vs. Swiss-Prot (Human)
Match: MYH10 (Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.036e-16
Identity = 92/313 (29.39%), Postives = 158/313 (50.48%), Query Frame = 2 
Query:  440 NRLQKQKKRMQNELDQINAIFDTEKSEIADLQAKLKRANKIVAEERRIREQLQEAKSDLIIEKTNLENKMETLEDDKRALDRQVTDGEIARKALRLECENLGDARDNAKSMINNLEKDKRHADILLEEARKTNASFESQLGEVEQNYMTLQGQNQANKEQYARDISRKDDKVEELKRAVDKAERDLKVTLEEEKKKREQMMASRKGLESQITGLQIELDEANRRNDDQQKVIRKYQTQLAQLKDLQMELGEMNXXXXXXXXXXXXXXXXARSAQSEKDSVIANLQQSEX--RSAQSEKNSVIANLQQSERAKR 1372
            ++L+K K R+Q ELD +    D ++   ++L+ K K+ ++++AEE+ I  +  E +     E    E K  +L            + E   K LR + E+L  ++D+    ++ LEK KR  +  +EE R      E +L   E   + L+   QA K Q+ RD+  +D++ EE KR + K  R+L+  LE+E+K+R   +AS+K +E  +  L+ +++ AN+  D+  K +RK Q   AQ+KD Q EL E                     A++ +D + A  ++SE   +S ++E   +   L  SERA+R
Sbjct: 1416 DKLEKTKNRLQQELDDLTVDLDHQRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQ---AQMKDYQRELEE---------------------ARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 1704
The following BLAST results are available for this feature:
BLAST of TCONS_00065968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYH107.036e-1629.39Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3[more]
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