TCONS_00065928 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065928
Unique NameTCONS_00065928
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2149

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065928 ID=TCONS_00065928|Name=TCONS_00065928|organism=Clytia hemisphaerica|type=transcript|length=2149bp
TAAAAAGAACTCCAGCTGTTGTGTAGTACTCAAACGGttaggaaattaca
aaaacaTTGGCCGAGCTGGTCATGAATTGGTCgtgaatgtaaacaaattt
tgaaatcaaaatagaaACCAAAACATCTGatcaaaaatcgaatgttttcc
cCCACGCTTTTATGAAAAGATTGGGAAAAGAGCAATTAACTGCAACTCAC
ACTGAAAGTCTATCTTCTAATTAAgGTATGGCAATAGCAGCAACCACAAT
CGATATGGCGTCCAAAGTCCATCAAATGACCAATGGGATGGAAGAAATAC
AAATCCAACCTTTGCAAAATAAACATACAAAACGAAAAGAAGAAGAGATC
AACAGGCTTTTCGATGCATCAAGAAGGAAACTGGATTCTTTAGATTCCCA
AAGGATCATTGGTGTTTTAGATGATTTCATACGGAAAACTGAGATTGTCA
CTTTACTTCCATTCATTGTTGAGAATTTAGATCGATATTCTATTATGCTT
GGATCTGATTTATGTTATTCGATTAAGGAATATGACCGTGTACAAACAAC
CTACTCCAAGGCCTGTGCTACACTACGAAAGTTACTGCAACAATTAGCAA
GACAAACCAAGGCGCGTGGTGAACACTCGGGGCTGAACGCTGAGTCTGAC
GAACAATCAAATATGATTGAAGAAGCTCAGACAAACCTTGGATTTGTCAG
TGCAAATTTAAGCGATAATATCAGAACTGTTTTACGTAAATTCAAGATGA
ACCCTTCCGCATTGCAATCTATAAGGATTGAGTTTCGTGAGCGTGCGTCC
GAAGCTAACGCGCTGATCGACCAATTGAATCAACTTCACGAGATGGTTTT
CAGTCGGCTTGTTACAACACCGAATGAAGAGATTGAGAAACATAAATTGA
CGATTCAAATGATGACACGTGAAAAGAAAGCACGATCTCTGATCACCAAA
CTTGATCAAGAATTGAAAACCGAAAGAGCAGCTAAAGATAACCTGaTCCA
CCAGAAAAATGAGACCGTTCGAAAATTGAAATCGAATATCTCGATGATTG
AACATGACTCTGAAGTTTCCAACCGAAAACTCGTCACAGAGGCACAAAAA
GTCGAGATAGCAGAAATTAAAAATTCGGATGGAAAGAGAGGGAAGCTTCA
ACAAGAAGTCATCCAGTTAAAACAACGTCTTCAGACTCAAGTCAGCAGTC
ATAAAGATTCGGAGCTGACTCTTCGAAAGCGCAAGTATAAAATCGAAACA
GAAGTTGAAAATTGGATTCAAAAATATGATTCAGAAATGGCTGAAAAACA
GGACGATATTGACGACTTGACGGATATCTATAACGACGAAAAGAAACAAT
TACAAGAACTTGAAGAAAGATTCAAAACACTTGAGGAGAAACACACAACC
ATTATTGAAGAACGACGCATCGCAGCTGAGAGACGAGAAAAGGCCGAACG
CGAACTCCGTGTAATGGTGCGCGCGGCCACTTTACTGCAAGCCATGTGGC
GCGCGTACAGATGTCGAAAAGCATTGAAACAGAAAGCGAAAGGCAAAGGG
AAGAAGGGAAAAGGAAAAggcaaaaagaaaagataaatagTTGAAGATCG
GACTTGATTTTTAGTAAAGCATTTTCTTCACGTGGTTTATAGGGCGGCAT
TCTTAAAGTACTTCCGATAAGACTCAGAAGTTTAACTTATCATTTGATTA
TTCTTTCTCGTTGCTTATGATTTACTTATCTTGAAATATTAGAAAAGAGC
TCTGTCGAGATTATTTCAGAAGTCGTAAGAGTTTCTAGGCTAcatatatt
aatttttttatcaaaatgaatgTGAATGAATTGATTTGTTCTTCGTGACT
AATTATTGGTCGACCtaagttttattttgttctgATTTACCTTAAGTGTA
TATATTGTAGCGAGGAGTACTAAATTCCTCGATTTACTAAATGGGATATT
TTTGGAAAGGGTTAAAACAAGAAAATGactatttttcttgtaacataACT
TATATGCTTATATGTTGCTAAAATAGTATCGAAAttcgattttgaaaatt
gtccCGTATATTTAAGGGccatagtcgaaaaattgattttagtaattgaa
cataaaagttatgttttaggctctttaaaacttttaacaaagaattgcc
Run BLAST on NCBI

protein sequence of TCONS_00065928-protein

>TCONS_00065928-protein ID=TCONS_00065928-protein|Name=TCONS_00065928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MAIAATTIDMASKVHQMTNGMEEIQIQPLQNKHTKRKEEEINRLFDASRR
KLDSLDSQRIIGVLDDFIRKTEIVTLLPFIVENLDRYSIMLGSDLCYSIK
EYDRVQTTYSKACATLRKLLQQLARQTKARGEHSGLNAESDEQSNMIEEA
QTNLGFVSANLSDNIRTVLRKFKMNPSALQSIRIEFRERASEANALIDQL
NQLHEMVFSRLVTTPNEEIEKHKLTIQMMTREKKARSLITKLDQELKTER
AAKDNLIHQKNETVRKLKSNISMIEHDSEVSNRKLVTEAQKVEIAEIKNS
DGKRGKLQQEVIQLKQRLQTQVSSHKDSELTLRKRKYKIETEVENWIQKY
DSEMAEKQDDIDDLTDIYNDEKKQLQELEERFKTLEEKHTTIIEERRIAA
ERREKAERELRVMVRAATLLQAMWRAYRCRKALKQKAKGKGKKGKGKGKK
KR
Run BLAST on NCBI

transcript from alignment at scaffold_448:773273..787577+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065928 ID=TCONS_00065928|Name=TCONS_00065928|organism=Clytia hemisphaerica|type=transcript|length=14305bp|location=Sequence derived from alignment at scaffold_448:773273..787577+ (Clytia hemisphaerica)
TAAAAAGAACTCCAGCTGTTGTGTAGTACTCAAACGGttaggaaattaca
aaaacaTTGGCCGAGCTGGTCATGAATTGGTCgtgaatgtaaacaaattt
tgaaatcaaaatagaaACCAAAACATCTGatcaaaaatcgaatgttttcc
cCCACGCTTTTATGAAAAGATTGGGAAAAGAGCAATTAACTGCAACTCAC
ACTGAAAGTCTATCTTCTAATTAAGTAAGTATGCTTTCATTTCATGTATC
ATTTTTGTGAGATTAAATTTAATCCTGAGAGACATTTTGGGGACGATTTT
CAGTCAGGAgtaataccttaaacaaggCGTATACCTTGTTCAAATAAGAA
ttccaaatttctattgtttgacACTTCCTATTTAGGAAGTTAGTGGGAAT
ATTTTCCAAACTAGGAAAAAGGGCACTCTCTCGTCTATACCATTGGAAAG
AGCACGAGAAACTGAATTCCCAtgatgatttttagaaaattccacAGCCG
GAATTGATCACAATCTTCAATTGTAAAACAACCTTAAAGTCTAGTCTACA
TGAAACGAAATCGGCTTTTTTAAAGGGTGTAGAAAGAGCTTCacacaaaa
caatttaaaatggtacccgacattttttcaagaaatctttaaaaatacct
TGAACAAGGTCattgtagctctaaagctctaaaacagcattcTAATAacc
atgaaaaccagaatatgattcttcaatgggaatcaaaactataaagtgca
cttacaaacatcaatttgtcagatctaacaaaatttataacggcaCTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAA
CAAGGTACccctaccttaaacaaggtatatacatgtaccttgtttaaggt
acatCCTAAACAAGGTATACGccttgtttaaggtattacTCCTGACTCCT
TCTTCGTCCTGGTAAAAAAAAAGTCACAGGGCGCGCGGGCTGGCCAGCAG
TTTTCAGACCCAGAGACAGAGCCATGTGTTGTGGCTGCTCATATCATGGC
TGCTCCCTAGGAAGAAAATATAGCATTGGAATCCTACCCCTAAGCNGGCT
GGCCAGCAGTTTTCAGACCCAGAGACAGAGCCATGTGTTGTGGCTGCTCA
TGGCTGCTCCCAAGGAAGAAAATATAGCATTGGAATCCTACCCCTAAGCT
TTGTGGTACCCACCCAGAATTAAGCTgttataaaaccagaaaaactATTG
AATATATATACCGTGaggttgggtaacttgcatcagtggagggaaacagg
accctgccgacgcaccggactgtccggtgtatttgtccggtggcaAAAAG
TATCCTTTCGTTACACCGGACGCAATAAGtctggtgtcagtccggtgttg
catacagggaattttggacgccggacatttatgaaacaaaaaattaagaa
acaccggacgcaccggactggtcatatCCTTCTCccacaccggacatccg
acttccgtaagtccggtgtagagattgtccggtggtaaaaaaaattctca
ttttacaccggactttcgcgtgtccggtgttcgttaagtcaggtgcgtcg
gcagggtcctagggaaacttgcatagctaTCCAAATGCCTCACTAACCAA
AGCAGCAAATGTCAAAACAAATGTAACAGTGCAAGAACTATGCAGCTCGG
CTCACAGGACATTCGGCTAaagcttcagatgcatccggctggacttagaa
tttttttcaagttgaataGTGACCAAAGAGGGTCTCGAACCGGGAACCTA
TAGGTTTCGAAACCAATGACCTATCCACTAGGCCAAGCCGGCTGCCGAAA
ATTCGTTATTTGGGGTTACTTATACGAAGGTCTTAGTACTATGTATAAAT
AAGTCTAACTGACGAGTTAAGCTAACTGTTATGATCGCCATTACTCCGAA
GAAGCCACCACACGTGTGCACCGCCGGGTGGGTGCACCGCCGGCCGGGTG
AGGGGTTAGGGatgcaaataaaaaatcatactAGGTCATAATTTTTAAGA
TGGCAGGAATTCAAATGTTTCTCGATGGCTGCTGGACATGTATGTAATCT
CTTTACTAATGATATCAACCATAATTGATAATTATGCATAACATCACTTT
CATGATGATTAGgagaatttgttttgatttaactttgtaattttaatgac
cagccgggTCATTGAGATCGATGCATATgctagcctccactgatgcaatt
TATCCGAATTCACAGTATATACCCCCTTCTAATGCACTTGAAAAAGGTAG
CCAACAAGCATCCAACTTTCTCAAATATTCTGGTTGGCTAAGTTGGCTCT
GAGTGGGCTAAGTTGGCTGGTTAGCTTGATGGGCTTTAAAGTTGGTTGTT
TGGCTAAGTTGATTAAGTTGGCTTATCTAAATGGTTATCTAGAAAAAAAG
GTTTCCAGCCAACCTAGCCAATTTAGCCAGTCATAATTTCTCGTCCTTTA
AAGGCTACACAAGTTGTATGTGGGGTCTATTGGCTGAGTCGGCTGGTTGG
CTCTGATTGTCGTTTGGTGATTGCAATTTGGCATGGGACAAGTAATCTAT
GTGAGAAGTTTATATATCTGCAATCTGCAGCAAAAACGAAaatggtctct
tctactgatttcTTTCTGGCGCTCTTTCACGGACTGTTTATTTAATTTCC
ACCTATAAGATTGCAGCATTTCACacagcccttctttttggcgcCTGttg
cctttcagtgccttgcctGAAGGGtggcaaaaaagtgaaacatggaaaag
ttttattttttattgtttttttaattgaaatggGGAAATGTTTGGTTTTT
tacacaaacccctgtaactatgggcgagcaacccattgctaagatgttgg
attgaaattgaaaatgaaaccactgaaaatgaaagtaaaatcggtCCACA
CTgcaaatcccgtaatcttgatataaaCGAGTTTAAATCTATATAGTTGA
TATGtcaaataagttgaaaatgattgtcaacaacaacaaagtgctctacc
agaaggagccttataacaaaacaaaaataaaaaacttaattttttgtagt
actttaagtttcttgcgtacaatcatcagctacatacaaaatgatctaac
ttgttggaaaaaattcaaatttttacaagTCGTAGGGTCGTAAAATGTcg
taaaattataataaaaattgaaacaaaagaaacaagaaaatgCTATTCTC
AAGGGTCCGTTAGTCTTTTGACTTGtaatttttattataattttagaaca
ttttacGACCCTACGacttgtaaaaatttgaaattttttccaacaagtta
gatcattttgtatgtatctgatgattgtacgcaagaaacttaaagtacta
caaaaaatgaagttttgaatttttgttttgttatatTGTCTATGTATTTA
TGGTATTTATAAATTTATAAGCTGGTACAAGTaggtgaacaaaaaataat
aaggtTAACTTTGGGTTCtttggtttttaaaaattttatttatataaaaa
aaatgagtactaaggtttaaaaaatatttacaaaagatatatacaaaaat
aatttattaagATAAGTTAAAAATCTTCGAATTCCAAGATTTCTTGAAAG
TTTATTTTCTCATCCTTGTCATATCTAAAAAATTAAAGATGAATGGTATT
CAAATTGCTGATATTATGATTtgataagaaaaaagaaactcATAGGACTA
TTTTTGAATGCTAGAAATTCAGTAGCAATGGTACCTCTTCAAAGTGGCAA
GTTACCATCATCTTTTCCcgataatttttcaattttctatgtGTGATTTA
TATTCCACtcctgaatatcttttcaagAAGCACAAAATATTATTCAAATG
ATATCGATGGTTGCAGcattttttgtctcagctgcagatatgttgagaca
gacttttgaaaagattttttaaaacttactCAAAATCGCCCCATTTGAGT
TCAACATCAGATTTTTTAGAGTGATTGGTGGTGGTCAATTGATGTTCATA
CTCAtctaagaataaaaaaaacatacatCCAATTCATGATATATAGCATA
GTAATATAATAAACAGTTTATAGTTAAATCAACTGTATTTTACAATATTG
TCCTCTTTCAGATATAGCATAGTAATATAATATTGCATGTGATATAACTT
AAGCTCAACAGCTTTTAGTGTCagttttacaaaaatcagaCTTTATCAGA
GCTGATCAGAGTGATATATTATGTGACCAGATGTTTTGACAAAATTGGGA
TAATTAATCTCCAGGGGATTTGGAATTTAATGAACAATGGTTTCTTTATT
CTTACCTTTGGGATTAATGACCATTCTATTGATTGTTTGATTGGAGGCAc
ttctgaaagaaaaaacaaaaaagttaaattaacaatttaatACCATTTCA
AAAAAGCTTTGATCCCGTTTTTTTATACAAATCATATAAACCTCAAACAA
ATAATTGATTGGGCACACAAGTATTTTTTCAGgttctaaaatttgaaatt
ggcTTTCTCAAAtaagataatttttgaaatgaaagtgaaataaaTTGACT
CCAGAACTTTTGATATAATGAAGGGTCGGTAAAGGGCTGGGTATTtatta
atatttgaaaattttgcataaATAAAAGATAAATCTTATAGTTATACACT
AAAGCTAAAGGTATTTAAACTCCTTGTCTACTAATACTTACTTGTTAAGT
CTGAAGTCATTATGGGCGGAACTGGCTACAGAAACCTCGTCATGAGACCA
CCCTCtacataaaaaagaaaagaaatagcaGTCACACATAACTATACATT
CTTTTATTAGAGACGGATTATAAGAAACTTTTCCTGTATCTCGAATAAGC
TATGGATTCCACGTCATTTTAATTTGGCTATTTTCACCTAAAACGATTCA
AGTAGTTTGGTTGGAGGGGTAAGTGGTTTATTCCAGTGGGGTGAAAAACG
GGGTCATCTGTTTGAAAGATTTTACAATAGGGTAACCAGTGGAGTGGGTC
CAACAGGGGTGTAGAAGATGCATAAATCAAAATATGTTGTAAACTTACGA
CATGTGAGGAAGGAACGAAGCCGGTATGAGAAGATACCCATTCATTTGTA
CAggtttcctaaaaataaagaaaatagatCTTATAAGCGTCTAAGAGTTA
AAGGGGTTTAGATTTGTTAAAtgtgagcaaaattttaaaacaatgaaaca
atcGGAGTCATGGTCTCAGCCCACTTTCCAGGTACTTCCAACGAATCCTG
GTACCCCGAATGATTTAGATCGCTTTAAAGATTTGCCATGACTTGGTTTC
ACCATCAACACCAAAAATCCGCCTtaggttgattgattgatttatggATT
TGAACAaggttgaaaatgaaaaaaatggatTGAAGAATTGTCTGCAATAT
TCAATTTGATTAATACTGGGAAACAGCGTCAGACTCTATCAGATCAGCTA
GCTAAACGAATCGGTAACCCCATCAATTTGCTAGATTTCAGCTCCCCTCT
AACGACTTTGCCTTGAACTCCTTGAAAAATCTGGGGAGGGGGGCTGAAAC
CAAGGGAATGTTTTGAGTGTNCCCATCAATTTGCTAGATTTCAGCTCCGC
TCTAACGACTTTGCCATGAACTCCTTGAAAAATCTTGGGGGGAAGGGCTG
AAACCAAGGGAATGTTTTGAGTATTTCATATGTTGATATTTTGACTTTGT
GCCATACTGCATACATTGTTCGTTTACAAATCTATTATATCTGTTGTATT
TGAGTAGATAAATACCCCCCTTattgtaaaaaagaaaattccacAAGTGT
ACTTACTCGATTTGTGGCTCGGGTTTACATTTTTGTTGTGGGCTGTTGGT
CGATGCACCACAATTTCCTTGCACCCGTGTAAGTTTCCTAAAAAACAATA
TTGCACTAATCattaggttttgtttttgatgacaCATCATTTTATTGCTG
TCTTGTTGCCAAAATAAGTCAGTTCTCTTTTAAGGTAAAAAAAATCACGG
TGGCTTTTTGGGTGAATTCAACTCCAGTGCTGCGACCGTTTCTTCTAACC
TTTTAACTGCCGACATCGGTTAAAAAATCGAAAGTGCCCACGGCAGTTAA
AGATTTAAcaatttcaaactttgaatcAATCCGTCTCTTTAGTATTAGTA
TTGATCCGTCCTTTAGTATTGATCCGACATTTAAGACATTATTCATCGAT
ATTATTTAAACTTACTGTTTTGGGTCATTCAATCGGTAATCTCGACATGC
TATCGATGGAGCTACAGCATTATTTTGCTTGTTGAACCTGAAAGGACAAA
TTTTAGATATTGTATGCTTTGAGGATATGGAAATAAACTGGAAAACTATA
GTGTGAGATTCAGCTGGGAGAAAAAAGGGCAGTTTGAAAGGCCCTGTGGC
ATAGTGGTCATTAAcattggttgctgcacaggagACTGAGGTTTAACTCC
CACTTGCAGTGGTTCACCTGGATCAACCCATGTAATGTGAGGGGGATAGT
GTAGTCATTTCAAGATAGTTCATTTAATTCATTGAAAGCGTTTATAATTG
TGAAAATGGGTTTCAGAACCTTAGaaccaaatagaaaaattaaaaaaaat
caacttacgTTTTCGGGGGTTCTTTTGATGAGCCACATTTCTCAATCACA
CGAGTGATTTTCCTATTAAAAAGAATGTACGATATTTATTTCATAAAGAT
Acaaaatattctcaacttcagttgagttagaatctgagaatgtgtgtctg
tgtgtgtgtctgtctgtgtgtatgtcccaaaactttggggcagcctggag
acttcaaaaattgttcgatttggctgaaattttgcacacttgttcctagg
gtgaatatctgggggtgtttttttcattttttttaaattttgatttttgG
GGCCTGGGGacgagtttttcgccaaaacgaggctaaaaccttagggcagc
ctggagacttcaaaaattgttcgatttggctgaaattttgcacacttgtt
tcttgggtgaatatctgggNNNNNNNNNNNNNNNNNNNNNNNNNNggggc
ctggggacaagtttttcgccaaaacgaggctaaaactttggggcagcctg
gagacttcaaaaattgttcgatttggctgaaatttttcacacttgttcct
tgggtgaatatctgggtgtagtttttgcatttttcaaaaattttgatttt
tggggcatGGGGACgacttttttgccaaaacgaggctaaagctttggagc
agcctacaggcctccaaattggtcggatttggttgaaatttggcacactt
gttcattgggtgaatatctgggggtctacaattgggcctatgaataattt
gaagccactgaagttgagcccagtgcgttgcgcacgttcgactatttatG
TAAGAAACTACAAAAACACATTtacattttaaggcattttaatgacccgg
taggattttttcatcTAGCGGATGTAGCAaaaaacggactgaaactcgct
GGGAACGTGTTTTTATGcttggggatttgaattcctttgttttaaattca
gaaaaaaatggGAGGGGTCCCGCCGGTGTGTCTGTTAAGAGGAGGTGTTA
CAATAATCTCAAAAAATTATCTTGTGCTAACAAACAACTCACTGTTGAGG
ATCATTCAACCGAACATCACGGCACATCAACTTGTGCTCAacatttttct
gctttttaacAATACTGAAAAAGATCGAAGAATTATATTTTGCAAGATGA
ACAAAAATCAAGAACAGGCAAGTCTGAGCAAAAGTCTACTGGCTCTAAgg
gccgctacccactcagcattttatggtcggcgaaCAAGGCGCACGACTCG
GCGCTTTGGTCACCGAACATAAAGTGCTGAATGGGTAGCGGCCTTTATAT
AAAAAAGAGTCTAAAGATATCGTTTCGTCGTAGATTGAGTGTCAAATTAA
GTCAAGTAGTCAAATTAAAGAAATATAGGGCTTACGGTTGAAGAAGTTTT
GCCGTTTTGCTATTAAAACTGGGCTTTGATTCAGCCTTCAATGCATTGTT
AATGGCTCTAAAAACAACAAGAAGAAATTGTTTAATAATTTACTTTATct
agttgaaaataaaacaaaatatagGCAAAAAAACAACTGGAAATCTAGAA
GCTAAAGTAAAAATTAGGACAAAAGGACATTTACATAAAGTCAAAAACGC
ACTTTTTGAGTAGAATGAAAAACGATGGGCAAATAAATCACACCTCTTCA
TTTTACTCCTACGAACGAAAAATTTAAATGACTTACTTTTGCTTTGCCAA
TTTAATATGCAATGCAACATTTTCTTGTCGGCATTCTTTTAATTGTTGTT
CTTTGACATTTGCGGCAACGCTCgtcaaaaaacatttatttttataacGC
TGAGTTTCCTTAGATAAAAACTTGATCCGCTCGTTTGCTTTTTCAAGCTC
AATATAAGCTAACGAAAGGACATCCATTTCTGACATTTTCTTACTTATCA
GAACTGAACTGCTACTATTAACTAACTAAAATACAAATGGTTTCTTTTTG
CAAAACGCTGATCtctaaacatttttcaaaaagaaatctgacgtcaaata
atttctTACTAAAATCACGTGacctaaaaaaaattgacgtcactcCTAAC
GAGTTTTACATCCAACCAAAGTCCAGAGAAAAAAGAGTTGTGCgagtgtt
ttcaaaaaaagtgcTGCATGTTGCCCGACAAGAAATAGCATTTTCTGCTG
AAAATAGATAGTACCGTTTCAGAAATTATTTTTGCGTTCTTAGACGTTTT
TAATGCTCATCCGCCCACTTTCATCCGGCTGTAAAAATTTATCCAATCAA
AGTATTGGAGTACACGTGTTTTGGAACAAACTTTTGGAAATCCAGGGAGA
CAAGAAAAATATGCACATAATCAACGTAACACAGACATCAATAAAAAACT
CTGTCTTGATCAATGATTTGATTCGACATCGATGCAGTACCTTCTTTTAA
GCAAATATTTTCAAGATTCCGACTTTACACTATCTTTGCAAACTCTAACA
ACAAACAGAAGTTAAGCAGAGAAATTCGGCTGTCTGAATTAGGATTTAAT
ATTGAAGTACTACAATTGAGTATCTTTAACTTGGTCTCTATATAGCTCGA
ATGTCTTGATAACTCGAACAAGTATTATAGCCCCTTCGCCTTcgccttca
gttaacaatgccttataaactttaccccataactcgaaatttccttaact
cgaacaacaACTTGCGTTCCCTGTACGTGTTCGATTTGGAATAGACTccg
ggacgagatggagtttttacaagctcttatttgatttggttggtcgttaa
ccagtgataaaataattttgttactttttctaaagaacgtgttattttta
ttacttcaaatgaccaattgttataaaaactccatctcatctggagactc
catctcatctggatgtgttgttttcattttttacaggGTATGGCAATAGC
AGCAACCACAATCGATATGGCGTCCAAAGTCCATCAAATGACCAATGGGA
TGGAAGAAATACAAATCCAACCTTTGCAAAATAAACATACAAAACGAAAA
GAAGAAGAGATCAACAGGCTTTTCGATGCATCAAGAAGGAAACTGGATTC
TTTAGATTCCCAAAGGATCATTGGTGTTTTAGATGATTTCATACGGAAAA
CTGAGATTGTCACTTTACTTCCATTCATTGTTGAGAATTTAGATCGATAT
TCTATTATGCTTGGATCTGATTTATGTTATTCGATTAAGGAATATGACCG
TGTACAAACAACCTACTCCAAGGCCTGTGCTACACTACGAAAGTTACTGC
AACAATTAGCAAGACAAACCAAGGCGCGTGGTGAACACTCGGGGCTGAAC
GCTGAGTCTGACGAACAATCAAATATGATTGAAGAAGCTCAGACAAACCT
TGGATTTGTCAGTGCAAATTTAAGCGATAATATCAGAACTGTTTTACGTA
AATTCAAGATGAACCCTTCCGCATTGCAATCTATAAGGATTGAGTTTCGT
GAGCGTGCGTCCGAAGCTAACGCGCTGATCGACCAATTGAATCAACTTCA
CGAGATGGTTTTCAGTCGGCTTGTTACAACACCGAATGAAGAGATTGAGA
AACATAAATTGACGATTCAAATGATGACACGTGAAAAGAAAGCACGATCT
CTGATCACCAAACTTGATCAAGAATTGAAAACCGAAAGAGCAGCTAAAGA
TAACCTGGTATGCCTCTCATTTCCACTCATTTTTCATACTAGGCTCTTTT
CATAGGGTTCTGATCGATTAGATAGTTTCCCCTTGAGAACAGACCGAGCC
CGAAACATCTcaggaaaaatcaaattataatAGTCATGTTCTTTTCCCCC
GTTCAACATATAGTTTCTGATTATACGGGCAAAGCTTTACATTAATTGGG
CTATTTTATCCACTGTTAATATTTGAAATATCCTACCCACGCCCCTCCAC
GAACTGAACTCCACGTTTAGAAACATGTTAATtttaaattatgaaataaa
atgcTCAGAATCTTTCTTAAATTCGAGAGGGCTCAAAATCACCAAGGCCA
ATTATTCTTCAGACAGCACACAAACCTAACAAGTCTCACTTATCTATTAT
ACTAAAGGTCGATCTTCAGTGAATCATTCGAAAAACATCTTTTAAATGAT
ATTccttttttgtaatttcagaTCCACCAGAAAAATGAGACCGTTCGAAA
ATTGAAATCGAATATCTCGATGATTGAACATGACTCTGAAGTTTCCAACC
GAAAACTCGTCACAGAGGCACAAAAAGTCGAGATAGCAGAAATTAAAAAT
TCGGATGGAAAGAGAGGGAAGCTTCAACAAGAAGTCATCCAGTTAAAACA
ACGTCTTCAGACTCAAGTCAGCAGTCATAAAGATTCGGAGCTGACTCTTC
GAAAGGTAATACTGGATTTTGATTAagattaccttaagtggattaaattt
cgtgatttttgcgAATCTCGGCtgttttcgcaaaaatttatctttgcgaa
aaatttattatccgaattttgaccaaaacctctaggaaaatgaaagaaat
tggtcGAAAAAGAGGCCGATTCTCGAAATTTTGTCTACacaaaaattttg
gattctCCATTCGGGAAAAAAGTCCgcgtgaaaattaatccacaattctt
tttttcattcaatactATCTCTGTCATTTTTTGTGAAACGATCCTTTTCG
AAGTGTTAGGTAAATGTAGGCTGCGCGAATCCCTGGAATACGCGACAACC
CTtctattaaaatttattttgtcacCTTTAATGTGCTCCACCAACTTAAT
GAACACAGTTaaagctctctaattcgattttaaaGGGGGTTTCATCGATT
AAGGGAGCATATTTAAAGTTGACggtggctttcaatattatcgaataatg
gagcgtatcgaatagtagaatgtcgaattagagagcgtcggCTGTAATCA
ATTCTCCCTCGAtatgaaaaataagaaacttaACCTTTATAAACCAAATA
GATTTCTTCTTTAGCGCAAGTATAAAATCGAAACAGAAGTTGAAAATTGG
ATTCAAAAATATGATTCAGAAATGGCTGAAAAACAGGTATACATTTATCT
TGCAAGGCTGTCACTTTTTCTACTTAGTGAGAAACCCGTCAATAGTATTT
TAATTTTCCATGGATAGACTATTTCATGATCATAATGCATGGTGGTATAA
ATGAAATCTTGCGGTCAGCCCCAAAGTcttcaaatttttgaacaaGCTTC
GAATGATGCCACTGAATGCCGTTACTTGAAGAAGTCCTAGACTTGTCCAT
GTGtaagttttggaaaaatatgCTACTTAATATTTATAAAGAAGTACAGT
agactttctctaattcgaatctctattattcgaatctttctgtaattcaa
actgAAATATTGGTTGCCTAAGCTGGAAAGTAGTGTTAAAaactctctgt
tattcgaatctttctctaattcgaataaaatttttgattcattgaAATGG
AATTCGAGATTGTCATTTGTATGTCAattaaattctttcaaaatttcgaa
GGTTAAGAAAAGTAAATTACTTTAATTTTCATGCCTTACACCAATCAGAC
gtacaaaaaatattatatctGTCAAATTCATGACTACtcgctaaaaccgg
ggtatttacgtagaaaacattacgtcatgaatatcatgaattcttgaACT
TTCACAGGACGATATTGACGACTTGACGGATATCTATAACGACGAAAAGA
AACAATTACAAGAACTTGAAGAAAGATTCAAAACACTTGAGGAGAAACAC
ACAACCATTATTGAAGAACGACGCATCGCAGCTGAGAGACGAGAAAAGGC
CGAACGCGAACTCCGTGTAATGGTGCGCGCGGCCACTTTACTGCAAGCCA
TGTGGCGCGCGTACAGATGTCGAAAAGCATTGAAACAGAAAGCGAAAGGC
AAAGGGAAGAAGGGAAAAGGAAAAggcaaaaagaaaagataaatagTTGA
AGATCGGACTTGATTTTTAGTAAAGCATTTTCTTCACGTGGTTTATAGGG
CGGCATTCTTAAAGTACTTCCGATAAGACTCAGAAGTTTAACTTATCATT
TGATTATTCTTTCTCGTTGCTTATGATTTACTTATCTTGAAATATTAGAA
AAGAGCTCTGTCGAGATTATTTCAGAAGTCGTAAGAGTTTCTAGGCTAca
tatattaatttttttatcaaaatgaatgTGAATGAATTGATTTGTTCTTC
GTGACTAATTATTGGTCGACCtaagttttattttgttctgATTTACCTTA
AGTGTATATATTGTAGCGAGGAGTACTAAATTCCTCGATTTACTAAATGG
GATATTTTTGGAAAGGGTTAAAACAAGAAAATGactatttttcttgtaac
ataACTTATATGCTTATATGTTGCTAAAATAGTATCGAAAttcgattttg
aaaattgtccCGTATATTTAAGGGccatagtcgaaaaattgattttagta
attgaacataaaagttatgttttaggctctttaaaacttttaacaaagaa
ttgcc

Coding sequence (CDS) from alignment at scaffold_448:773273..787577+

>TCONS_00065928 ID=TCONS_00065928|Name=TCONS_00065928|organism=Clytia hemisphaerica|type=CDS|length=5436bp|location=Sequence derived from alignment at scaffold_448:773273..787577+ (Clytia hemisphaerica)
ATGGCAATAGCAGCAACCACAATCGATATGGCGTCCAAAGTCCATCAAAT
GACCAATGGGATGGAAGAAATACAAATCCAACCTTTGCAAAATAAACATA
CAAAACGAAAAGAAGAAGAGATCAACAGGCTTTTCGATGCATCAAGAAGG
AAACTGGATTCTTTAGATTCCCAAAGGATCATTGGTGTTTTAGATGATTT
CATACGGAAAACTGAGATTGTCACTTTACTTCCATTCATTGTTGAGAATT
TAGATCGATATTCTATTATGCTTGGATCTGATTTATGTTATTCGATTAAG
GAATATGACCGTGTACAAACAACCTACTCCAAGGCCTGTGCTACACTACG
AAAGTTACTGCAACAATTAGCAAGACAAACCAAGGCGCGTGGTGAACACT
CGGGGCTGAACGCTGAGTCTGACGAACAATCAAATATGATTGAAGAAGCT
CAGACAAACCTTGGATTTGTCAGTGCAAATTTAAGCGATAATATCAGAAC
TGTTTTACGTAAATTCAAGATGAACCCTTCCGCATTGCAATCTATAAGGA
TTGAGTTTCGTGAGCGTGCGTCCGAAGCTAACGCGCTGATCGACCAATTG
AATCAACTTCACGAGATGGTTTTCAGTCGGCTTGTTACAACACCGAATGA
AGAGATTGAGAAACATAAATTGACGATTCAAATGATGACACGTGAAAAGA
AAGCACGATCTCTGATCACCAAACTTGATCAAGAATTGAAAACCGAAAGA
GCAGCTAAAGATAACCTGaTCCACCAGAAAAATGAGACCGTTCGAAAATT
GAAATCGAATATCTCGATGATTGAACATGACTCTGAAGTTTCCAACCGAA
AACTCGTCACAGAGGCACAAAAAGTCGAGATAGCAGAAATTAAAAATTCG
GATGGAAAGAGAGGGAAGCTTCAACAAGAAGTCATCCAGTTAAAACAACG
TCTTCAGACTCAAGTCAGCAGTCATAAAGATTCGGAGCTGACTCTTCGAA
AGCGCAAGTATAAAATCGAAACAGAAGTTGAAAATTGGATTCAAAAATAT
GATTCAGAAATGGCTGAAAAACAGGACGATATTGACGACTTGACGGATAT
CTATAACGACGAAAAGAAACAATTACAAGAACTTGAAGAAAGATTCAAAA
CACTTGAGGAGAAACACACAACCATTATTGAAGAACGACGCATCGCAGCT
GAGAGACGAGAAAAGGCCGAACGCGAACTCCGTGTAATGGTGCGCGCGGC
CACTTTACTGCAAGCCATGTGGCGCGCGTACAGATGTCGAAAAGCATTGA
AACAGAAAGCGAAAGGCAAAGGGAAGAAGGGAAAAGGAAAAggcaaaaag
aaaagataaATGGCAATAGCAGCAACCACAATCGATATGGCGTCCAAAGT
CCATCAAATGACCAATGGGATGGAAGAAATACAAATCCAACCTTTGCAAA
ATAAACATACAAAACGAAAAGAAGAAGAGATCAACAGGCTTTTCGATGCA
TCAAGAAGGAAACTGGATTCTTTAGATTCCCAAAGGATCATTGGTGTTTT
AGATGATTTCATACGGAAAACTGAGATTGTCACTTTACTTCCATTCATTG
TTGAGAATTTAGATCGATATTCTATTATGCTTGGATCTGATTTATGTTAT
TCGATTAAGGAATATGACCGTGTACAAACAACCTACTCCAAGGCCTGTGC
TACACTACGAAAGTTACTGCAACAATTAGCAAGACAAACCAAGGCGCGTG
GTGAACACTCGGGGCTGAACGCTGAGTCTGACGAACAATCAAATATGATT
GAAGAAGCTCAGACAAACCTTGGATTTGTCAGTGCAAATTTAAGCGATAA
TATCAGAACTGTTTTACGTAAATTCAAGATGAACCCTTCCGCATTGCAAT
CTATAAGGATTGAGTTTCGTGAGCGTGCGTCCGAAGCTAACGCGCTGATC
GACCAATTGAATCAACTTCACGAGATGGTTTTCAGTCGGCTTGTTACAAC
ACCGAATGAAGAGATTGAGAAACATAAATTGACGATTCAAATGATGACAC
GTGAAAAGAAAGCACGATCTCTGATCACCAAACTTGATCAAGAATTGAAA
ACCGAAAGAGCAGCTAAAGATAACCTGaTCCACCAGAAAAATGAGACCGT
TCGAAAATTGAAATCGAATATCTCGATGATTGAACATGACTCTGAAGTTT
CCAACCGAAAACTCGTCACAGAGGCACAAAAAGTCGAGATAGCAGAAATT
AAAAATTCGGATGGAAAGAGAGGGAAGCTTCAACAAGAAGTCATCCAGTT
AAAACAACGTCTTCAGACTCAAGTCAGCAGTCATAAAGATTCGGAGCTGA
CTCTTCGAAAGCGCAAGTATAAAATCGAAACAGAAGTTGAAAATTGGATT
CAAAAATATGATTCAGAAATGGCTGAAAAACAGGACGATATTGACGACTT
GACGGATATCTATAACGACGAAAAGAAACAATTACAAGAACTTGAAGAAA
GATTCAAAACACTTGAGGAGAAACACACAACCATTATTGAAGAACGACGC
ATCGCAGCTGAGAGACGAGAAAAGGCCGAACGCGAACTCCGTGTAATGGT
GCGCGCGGCCACTTTACTGCAAGCCATGTGGCGCGCGTACAGATGTCGAA
AAGCATTGAAACAGAAAGCGAAAGGCAAAGGGAAGAAGGGAAAAGGAAAA
ggcaaaaagaaaagataaATGGCAATAGCAGCAACCACAATCGATATGGC
GTCCAAAGTCCATCAAATGACCAATGGGATGGAAGAAATACAAATCCAAC
CTTTGCAAAATAAACATACAAAACGAAAAGAAGAAGAGATCAACAGGCTT
TTCGATGCATCAAGAAGGAAACTGGATTCTTTAGATTCCCAAAGGATCAT
TGGTGTTTTAGATGATTTCATACGGAAAACTGAGATTGTCACTTTACTTC
CATTCATTGTTGAGAATTTAGATCGATATTCTATTATGCTTGGATCTGAT
TTATGTTATTCGATTAAGGAATATGACCGTGTACAAACAACCTACTCCAA
GGCCTGTGCTACACTACGAAAGTTACTGCAACAATTAGCAAGACAAACCA
AGGCGCGTGGTGAACACTCGGGGCTGAACGCTGAGTCTGACGAACAATCA
AATATGATTGAAGAAGCTCAGACAAACCTTGGATTTGTCAGTGCAAATTT
AAGCGATAATATCAGAACTGTTTTACGTAAATTCAAGATGAACCCTTCCG
CATTGCAATCTATAAGGATTGAGTTTCGTGAGCGTGCGTCCGAAGCTAAC
GCGCTGATCGACCAATTGAATCAACTTCACGAGATGGTTTTCAGTCGGCT
TGTTACAACACCGAATGAAGAGATTGAGAAACATAAATTGACGATTCAAA
TGATGACACGTGAAAAGAAAGCACGATCTCTGATCACCAAACTTGATCAA
GAATTGAAAACCGAAAGAGCAGCTAAAGATAACCTGaTCCACCAGAAAAA
TGAGACCGTTCGAAAATTGAAATCGAATATCTCGATGATTGAACATGACT
CTGAAGTTTCCAACCGAAAACTCGTCACAGAGGCACAAAAAGTCGAGATA
GCAGAAATTAAAAATTCGGATGGAAAGAGAGGGAAGCTTCAACAAGAAGT
CATCCAGTTAAAACAACGTCTTCAGACTCAAGTCAGCAGTCATAAAGATT
CGGAGCTGACTCTTCGAAAGCGCAAGTATAAAATCGAAACAGAAGTTGAA
AATTGGATTCAAAAATATGATTCAGAAATGGCTGAAAAACAGGACGATAT
TGACGACTTGACGGATATCTATAACGACGAAAAGAAACAATTACAAGAAC
TTGAAGAAAGATTCAAAACACTTGAGGAGAAACACACAACCATTATTGAA
GAACGACGCATCGCAGCTGAGAGACGAGAAAAGGCCGAACGCGAACTCCG
TGTAATGGTGCGCGCGGCCACTTTACTGCAAGCCATGTGGCGCGCGTACA
GATGTCGAAAAGCATTGAAACAGAAAGCGAAAGGCAAAGGGAAGAAGGGA
AAAGGAAAAggcaaaaagaaaagataaATGGCAATAGCAGCAACCACAAT
CGATATGGCGTCCAAAGTCCATCAAATGACCAATGGGATGGAAGAAATAC
AAATCCAACCTTTGCAAAATAAACATACAAAACGAAAAGAAGAAGAGATC
AACAGGCTTTTCGATGCATCAAGAAGGAAACTGGATTCTTTAGATTCCCA
AAGGATCATTGGTGTTTTAGATGATTTCATACGGAAAACTGAGATTGTCA
CTTTACTTCCATTCATTGTTGAGAATTTAGATCGATATTCTATTATGCTT
GGATCTGATTTATGTTATTCGATTAAGGAATATGACCGTGTACAAACAAC
CTACTCCAAGGCCTGTGCTACACTACGAAAGTTACTGCAACAATTAGCAA
GACAAACCAAGGCGCGTGGTGAACACTCGGGGCTGAACGCTGAGTCTGAC
GAACAATCAAATATGATTGAAGAAGCTCAGACAAACCTTGGATTTGTCAG
TGCAAATTTAAGCGATAATATCAGAACTGTTTTACGTAAATTCAAGATGA
ACCCTTCCGCATTGCAATCTATAAGGATTGAGTTTCGTGAGCGTGCGTCC
GAAGCTAACGCGCTGATCGACCAATTGAATCAACTTCACGAGATGGTTTT
CAGTCGGCTTGTTACAACACCGAATGAAGAGATTGAGAAACATAAATTGA
CGATTCAAATGATGACACGTGAAAAGAAAGCACGATCTCTGATCACCAAA
CTTGATCAAGAATTGAAAACCGAAAGAGCAGCTAAAGATAACCTGaTCCA
CCAGAAAAATGAGACCGTTCGAAAATTGAAATCGAATATCTCGATGATTG
AACATGACTCTGAAGTTTCCAACCGAAAACTCGTCACAGAGGCACAAAAA
GTCGAGATAGCAGAAATTAAAAATTCGGATGGAAAGAGAGGGAAGCTTCA
ACAAGAAGTCATCCAGTTAAAACAACGTCTTCAGACTCAAGTCAGCAGTC
ATAAAGATTCGGAGCTGACTCTTCGAAAGCGCAAGTATAAAATCGAAACA
GAAGTTGAAAATTGGATTCAAAAATATGATTCAGAAATGGCTGAAAAACA
GGACGATATTGACGACTTGACGGATATCTATAACGACGAAAAGAAACAAT
TACAAGAACTTGAAGAAAGATTCAAAACACTTGAGGAGAAACACACAACC
ATTATTGAAGAACGACGCATCGCAGCTGAGAGACGAGAAAAGGCCGAACG
CGAACTCCGTGTAATGGTGCGCGCGGCCACTTTACTGCAAGCCATGTGGC
GCGCGTACAGATGTCGAAAAGCATTGAAACAGAAAGCGAAAGGCAAAGGG
AAGAAGGGAAAAGGAAAAggcaaaaagaaaagataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041304XLOC_041304Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065928-exon-scaffold_448-1491911889:773273..773496TCONS_00065928-exon-scaffold_448-1491911889:773273..773496Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1510915933:773273..773496TCONS_00065928-exon-scaffold_448-1510915933:773273..773496Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1575043694:773273..773496TCONS_00065928-exon-scaffold_448-1575043694:773273..773496Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1491911889:783959..784729TCONS_00065928-exon-scaffold_448-1491911889:783959..784729Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1510915933:783959..784729TCONS_00065928-exon-scaffold_448-1510915933:783959..784729Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1575043694:783959..784729TCONS_00065928-exon-scaffold_448-1575043694:783959..784729Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1491911889:785194..785427TCONS_00065928-exon-scaffold_448-1491911889:785194..785427Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1510915933:785194..785427TCONS_00065928-exon-scaffold_448-1510915933:785194..785427Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1575043694:785194..785427TCONS_00065928-exon-scaffold_448-1575043694:785194..785427Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1491911889:786037..786108TCONS_00065928-exon-scaffold_448-1491911889:786037..786108Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1510915933:786037..786108TCONS_00065928-exon-scaffold_448-1510915933:786037..786108Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1575043694:786037..786108TCONS_00065928-exon-scaffold_448-1575043694:786037..786108Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1491911889:786730..787577TCONS_00065928-exon-scaffold_448-1491911889:786730..787577Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1510915933:786730..787577TCONS_00065928-exon-scaffold_448-1510915933:786730..787577Clytia hemisphaericaexon
TCONS_00065928-exon-scaffold_448-1575043694:786730..787577TCONS_00065928-exon-scaffold_448-1575043694:786730..787577Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065928-proteinTCONS_00065928-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:773273..787577 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.28424	8.82743	2.60896	1.53958	102.815	76.2566	52.9948	51.5061	29.28	33.5193	20.5657	26.0151	5.75283	4.86286	2.26377	4.47984	3.41836	5.76916	9.46729	9.29656	6.0824	6.28716	10.9873	9.77934	11.977	12.6693	17.854	19.6697	5.39919	5.81112
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00065928 vs. Swiss-Prot (Human)
Match: IQCD (IQ domain-containing protein D OS=Homo sapiens GN=IQCD PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.612e-45
Identity = 127/383 (33.16%), Postives = 230/383 (60.05%), Query Frame = 3 
Query:  369 SRRKLDSLDSQRIIGVLDDFIRKTEIVTLLPFIVENLDRYSIMLGSDLCYSIKEYDRVQTTYSKACATLRKLLQQLARQTKARGEHSGLNAESDEQSNMIEEAQTNLGFVSANLSDNIRTVLRKFKMNPSALQSIRIEFRERASEANALIDQLNQLHEMVFSRLVTTPNEEIEKHKLTIQMMTREKKARSLITKLDQELKTERAAKDNLIHQKNETVRKLKSNISMIEHDSEVSNRKLVTEAQKVEIAEIKNSDGKRGKLQQEVIQLKQRLQTQVSSHKDSELTLRKRKYKIETEVENWIQKYDSEMAEKQXXXXXXXXXXXXEKKQLQELEERFKTLEEKHTTXXXXXXXXXXXXXXXXXXXXVMVRAATLLQAMWRAYRCR 1517
            SR KL +++++RI+ +LD+ I K E+VTLL ++  N +    MLG D+  +++E++ +     +    L++  +QL  Q +A  E   L     ++   IE  +++L  +   + D+ + VLR    NP A + ++++ + R++EA   ID L +L   +F +L+T+P E  +K +    +  +    + +I  L++EL      ++  + ++N  +++LK+++  +   SE S  +   EA+K + A+ + S  +  K+QQE++QL+ +    V  ++++E  LRK+KYK+ETE+ENWIQKYD+EM EKQ++++DL  ++ +EK  L+EL  R K L  +   I EER I +++R +AE+E+  MVRAATL+QA+W+ Y  R
Sbjct:   40 SRTKLTTIEAKRIMSILDEAIYKVELVTLLSYVASNREDMEGMLGEDVMRAVREHEDLCQVLLENVRCLKEKERQLQEQKEAE-EEGWLR----DRLLSIELQKSSLSPLMQQIKDSTKNVLRLLLSNPQAARLLQMQTQGRSAEAQNFIDSLIELRGFLFEKLLTSPMEARDKAQFLQDISRQNSNNQQIIDTLEKELAERMKNRNAEVEKENFVIQELKNHLHQVLKFSENSLVRTKQEAEKQQKADFRASQARVAKIQQEILQLQSQFYNLVMENREAEQALRKKKYKVETEIENWIQKYDTEMGEKQEELEDLDAVHREEKISLEELRRRHKVLVGEFAQIREEREINSKKRMEAEQEMVRMVRAATLIQALWKGYLVR 417
The following BLAST results are available for this feature:
BLAST of TCONS_00065928 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IQCD1.612e-4533.16IQ domain-containing protein D OS=Homo sapiens GN=... [more]
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