TCONS_00065928-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065928-protein
Unique Name	TCONS_00065928-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	452

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065928-protein ID=TCONS_00065928-protein|Name=TCONS_00065928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MAIAATTIDMASKVHQMTNGMEEIQIQPLQNKHTKRKEEEINRLFDASRR
KLDSLDSQRIIGVLDDFIRKTEIVTLLPFIVENLDRYSIMLGSDLCYSIK
EYDRVQTTYSKACATLRKLLQQLARQTKARGEHSGLNAESDEQSNMIEEA
QTNLGFVSANLSDNIRTVLRKFKMNPSALQSIRIEFRERASEANALIDQL
NQLHEMVFSRLVTTPNEEIEKHKLTIQMMTREKKARSLITKLDQELKTER
AAKDNLIHQKNETVRKLKSNISMIEHDSEVSNRKLVTEAQKVEIAEIKNS
DGKRGKLQQEVIQLKQRLQTQVSSHKDSELTLRKRKYKIETEVENWIQKY
DSEMAEKQDDIDDLTDIYNDEKKQLQELEERFKTLEEKHTTIIEERRIAA
ERREKAERELRVMVRAATLLQAMWRAYRCRKALKQKAKGKGKKGKGKGKK
KR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041304	XLOC_041304	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065928	TCONS_00065928	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..395
None	No IPR available	COILS	Coil	Coil	coord: 239..259
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	GENE3D	1.20.5.50		coord: 279..394 e-value: 2.3E-4 score: 20.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..452
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 412..434 e-value: 0.0031 score: 26.7
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 415..434 e-value: 2.6E-4 score: 20.4
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 413..442 score: 8.004

Blast

[Close]

BLAST of TCONS_00065928-protein vs. Swiss-Prot (Human)
Match: IQCD (IQ domain-containing protein D OS=Homo sapiens GN=IQCD PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 1.343e-60
Identity = 128/387 (33.07%), Postives = 232/387 (59.95%), Query Frame = 0

Query:   48 SRRKLDSLDSQRIIGVLDDFIRKTEIVTLLPFIVENLDRYSIMLGSDLCYSIKEYDRVQTTYSKACATLRKLLQQLARQTKARGEHSGLNAESDEQSNMIEEAQTNLGFVSANLSDNIRTVLRKFKMNPSALQSIRIEFRERASEANALIDQLNQLHEMVFSRLVTTPNEEIEKHKLTIQMMTREKKARSLITKLDQELKTERAAKDNLIHQKNETVRKLKSNISMIEHDSEVSNRKLVTEAQKVEIAEIKNSDGKRGKLQQEVIQLKQRLQTQVSSHKDSELTLRKRKYKIETEVENWIQKYDSEMAEKQDDIDDLTDIYNDEKKQLQELEERFKTLEEKHTTIIEERRIAAERREKAERELRVMVRAATLLQAMWRAYRCRKALK 434
            SR KL +++++RI+ +LD+ I K E+VTLL ++  N +    MLG D+  +++E++ +     +    L++  +QL  Q +A  E   L     ++   IE  +++L  +   + D+ + VLR    NP A + ++++ + R++EA   ID L +L   +F +L+T+P E  +K +    +  +    + +I  L++EL      ++  + ++N  +++LK+++  +   SE S  +   EA+K + A+ + S  +  K+QQE++QL+ +    V  ++++E  LRK+KYK+ETE+ENWIQKYD+EM EKQ++++DL  ++ +EK  L+EL  R K L  +   I EER I +++R +AE+E+  MVRAATL+QA+W+ Y  R  L+
Sbjct:   40 SRTKLTTIEAKRIMSILDEAIYKVELVTLLSYVASNREDMEGMLGEDVMRAVREHEDLCQVLLENVRCLKEKERQLQEQKEAE-EEGWLR----DRLLSIELQKSSLSPLMQQIKDSTKNVLRLLLSNPQAARLLQMQTQGRSAEAQNFIDSLIELRGFLFEKLLTSPMEARDKAQFLQDISRQNSNNQQIIDTLEKELAERMKNRNAEVEKENFVIQELKNHLHQVLKFSENSLVRTKQEAEKQQKADFRASQARVAKIQQEILQLQSQFYNLVMENREAEQALRKKKYKVETEIENWIQKYDTEMGEKQEELEDLDAVHREEKISLEELRRRHKVLVGEFAQIREEREINSKKRMEAEQEMVRMVRAATLIQALWKGYLVRSLLR 421

The following BLAST results are available for this feature:

BLAST of TCONS_00065928-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065928-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IQCD	1.343e-60	33.07	IQ domain-containing protein D OS=Homo sapiens GN=...	[more]

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TCONS_00065928-protein (polypeptide) - C. hemisphaerica