TCONS_00065912 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065912
Unique NameTCONS_00065912
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2035

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065912 ID=TCONS_00065912|Name=TCONS_00065912|organism=Clytia hemisphaerica|type=transcript|length=2035bp
CTGTCAGCGCGATAAGACTTCAAAGAAACTACTGCTGGAAGTAGGCTAGT
AAAATTCCAAAGTTTAGGGAAAgggaacggaacggaacggacGGAAGACA
CTACAAACAGCTCTTGACGTCCTCGAATCAcactttgtcaatttttagaA
CGTTCCCCCTCTTTTCAGCATTGAATTCTGAAAGATTCAGATCTCTATAT
ACAAGGATCAACGTGCAATGAGATGAGAATAAAAATTTCGGACATTTTCA
AAGATGTCAGAGCAACCTAACAGAAGAATGGGCAAGGGAGAGAAGAAACG
CCCACTAAAAATTGTCATGCCTCCTGTTCACCAAACGCAACCTCAACCAG
TaaatgctccaAGGAATTTATCAGATAGAACCACATTAACTGTGAACAGC
CAGGATTACCCGTGCAGTACTGATGATTTGATAGAAATATGCGAGCTTGG
TCGTGGGGCCTATGGGGTTGTAGAAAAAATGAGACATAAACAAACTAACA
TAGAAATGGCTGTGAAGCGTATTAGGCACACGGTCAACACGACAGAGCAA
GGTCGTCTATTAATGGATTTAGATGTTTCAATGAGACTTAGTAATTACCC
CTATGCCATCCAGTTTTATGGTGCACTCTTCAAAGAGgGAGATGTTTGGA
TATGCATGGAACTCATGAAAACATCATTCgataaattttataaaaaagtt
gcAGAGCAAGAAGGGGCTTTGATACCTGAAAAAGTACTGGGAAAAATATC
CTTCGCTGTTGTTTCTGCATTGGAATATTTACATAGTAAAATGAAAGTAA
TCCACAGAGATGTCAAACCGTCCAATATATTAGTTAATGATAACGGAGAG
ATCAAATTATGTGACTTTGGAATCAGCGGACAACTGGTTGACTCTCTGGC
AAAAACCCTTACAGCTGGCTGTAAGCCCTATATGGCTCCTGAACGTATCA
ACCCAACGAAGGGACAACATGGTTATGATATACGTTCTGATGTGTGGAGC
TTAGGAATCACCATGGTCGAACTGGCATGTTTGAAATTCCCCTACAGCAG
GTGGACAACACCTTTCGATCAATTAAAAGCAGTGGTAGAGGAGCCTTCGC
CTACGATACCATCCGAACATAATTATTCTGATGAACTTCATCAATTTATT
TCACTTTGtttgaagaaGAACTTCCTGGAAAGACCAAAATATGACACTCT
ATTGACGGACTCATTCATCCTGACTCACGAGAAAACACCGGTTAACGAAA
TCGCAGGCTTCGTTCAACCCATCCTGGACCAAGTATGAATGACTAAACGT
CACATGTCAATCAAATGACGTcatatgacgtaatcttttcgaAAATGGGA
GTGTCTTTACAATTcaagtttttttggcaaattgtGCTGGCTATGACACT
GCTTGGCTTAAATGACGTCACTTTCTATAAGAAATCGAACCACAGAAATT
CATCGAATGAATATACCTACCAGCCCTCGTGTCGTATAGAACTCTATAAA
AGCGGACCGGACTTCAAGTTTACTGGGACCGAATGACACCAATCAGTCTC
AAGTCAATATTATGACTCTCACAGCTTTtagaaatatttgacgtcattcG
ATCTCGATAAACTCGGGTCCAACCCCCTTGAGTTGATTGGTTTTATTCAA
AGCCTAAAAGGCCTGAGCTTTAAAGACATTTGTTACATTGTTAGTTCGAT
GTAAATCGAatattttttatagttttttgtGGAGAAAGCGAAATGAATTA
TGGGAATGTTGCATTGCATTGCTTGGCAATGTTAGTGCTTAGTTTTCATC
TTTCGTCAAATCAGCTTTTTCTTGTTAAACGTtgtttagctctagtttag
acggcccatcttttgccctgcctattctgattgtgaattaaagtgggctg
tctaaagtcaaagCAATGTCCTCTTTTGACGCTAATGCAATATTGTCttc
tttcaaacttttccagcttttccaagcaaagattttaactaccAAGTTTG
TGCCCTCTTTCTATCTACTCTAACAATTAAAATAG
Run BLAST on NCBI

transcript from alignment at scaffold_448:528596..544571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065912 ID=TCONS_00065912|Name=TCONS_00065912|organism=Clytia hemisphaerica|type=transcript|length=15976bp|location=Sequence derived from alignment at scaffold_448:528596..544571+ (Clytia hemisphaerica)
CTGTCAGCGCGATAAGACTTCAAAGAAACTACTGCTGGAAGTAGGCTAGT
AAAATTCCAAAGTTTAGGGAAAgggaacggaacggaacggacGGAAGACA
CTACAAACAGCTCTTGACGTCCTCGAATCAcactttgtcaatttttagaA
CGTTCCCCCTCTTTTCAGCATTGAATTCTGAAAGATTCAGATCTCTATAT
ACAAGGATCAACGTGCAATGAGATGAGAATAAAAATTTCGGACATTTTCA
AAGATGTCAGGTATGTGTTTTTTCAGGGCCATTTTGCGTTGTTCGTAAAT
TTCTTTTTGGTTGCCGACACTTTTCCCTTTGCTCACAGTTTTGTTCTATG
AAGCTCACAGTCTTAaaatgaatagaccttttttcaaagaggccaccctg
ttgaataattatgtagtccagcagaaaaacaatgataaaaccatgcataa
ttatcacaatatgcatgatacagtaattatgcatggctctatcattgttt
ttatggctggactacataaccagacgatgtcaatcgaacggaatcgaaca
aaaattccaatcgaatcaatcgaacgcaatcgaatgattgcgattcgatt
gccaaacgcaatcgaatatcaatcgaacgtaaaattctgggtaaaattcg
attgattcgattgatattcgattacgttcgattgatgttcgattacgttc
gattgatgttcgattacgttcgactgcGTTCGACGGGTGGTCAATTAAAT
TAGATTCCAATTtacctcaattcctttcaaGGTGATATGGAAATCGCGAA
CCGGCCAAACAGCCATCGTACTCGTAGATTTTGCGGGCAACGTGACATAC
AGCCGTCTTTTCTTCGATTCATATCATCTCGTTTAACGCTTCAAATGTTG
AACAAGAATCAACgttaatcaacagaatcaattagtcgaaccagtcgaat
gcaTAAGCCAATCGAACGtagtcgaatcaatcgaatacattagtcaatcg
aacgcaatcgaatcaatcgaacacagtcgaatcaatcgaatcaatcgaat
ccaggcactaatcgaacgcaatcaaatcaatcgaacacagtcgaatcaat
cgaatacattagtcaatcgaacgcaatcgaatcaatcgaacacagtcgaa
tcaatcgaatcaatcgaatccaggcactaatcgaacgcaatcaaatcaat
cgagaaaatcgcggtaatattcgattgacattcgattgcgttcaattgat
tcggcgttcgatttgttcgattgacatcgtctggacataattattcaaca
gggtggcctctttgaaaaatattattcctttctctaaaaaagaagggtgt
cggaattagacgaggcgAGGGATGTCCAAACGATcccaatcgaacggaat
cgacgatcaaaccagtcgaaccaaatcaaacgcaatcgaccgggttattt
ttttcttgtattttttgaaattgtctggTACTGTTGGATtctagaggagg
ggtgtcgatattagaccaagttGCGGTACGCACCACCACTAAGGGGGaag
ggggtcttctcaaaagcgtatgcttgctaACAGggcacaagtgttacgcg
taagccaaatcgcgtattatgaacaacctctaaattgctgattacaggag
aaaaaaaatcgaaattcaaaatggcagcCAAGCCCAcactgataactatc
aaaaatctttgtttttcaatcagctaccgtgagattgggtaacttgcatc
agtggaggcaaacatgcataaacctcaaatgaaagacctgtattaagttg
aagttggtttgatattctacgtttgacgtttgatattcgtttgatattct
caaatttgcgttttgaagtttttgtgactacttttggaactggaaactat
tggaagccaatagactTTATTCTCAAGtgtgtctgtgcaaaatttcagcg
ctctccgtcgcagtgtgctccctctaaaaatttgtaaccgtcaaacctca
tttcggccgaaatgacaagttgggctcctgtgggggagagcggttatctt
tggaattggaaactattggaagccaatagagtttattctcaagggtgtct
gtgcaaaatttcagcgctcttcgacgcagtgtgctccctctaaaaatttg
taaccgtcaaacctcatttcggccgaaatgacaagttgggctcctttGGG
GGAGAGTGGTTATcattggaattggaaactattggaagccaatagagttt
attctcaagggtgtgtgtgcaaaatttcagcgctctccgtcgcagcgtgc
tccctctaaaaatttgtaaccgttaaacctcatttcggccaaaatgacaa
gttgggctcctgtgggggagagtggttatctttggaactggaaactattg
gccatttttagagggagcacgctgcgacgaagagcgctgaaattttgctt
ccaatagtttccagttccaaagataaccactctcccccacaggagcccaa
cttgtcattttggccgaaatgaggtttaacggttaccaatttttagaggg
agcacgctgcgacgaaGAGCGCTGATATtttgcacagacacccttgagaa
taaagtctattggcttccaatagtttccagttccaaagataaccactctc
ccccacaggagcccaacttgtcattttggccgaaatgaggtttaacggtt
accaatttttagagggagcacgctgcgacggagagcgctgaaattttgca
cagacacccttgagaataaactctattggcttccaatagtttccagttcc
aaagataaccgctctcccccacaggagcccaacttgacatttcggccgaa
atgaggtttaacggttacaaatttttagagggagcacgctgcgtcgaaga
gcgctgaaattttgcacacacacccttgagaataaactctattggcttcc
aatagtttccagttccaaagataaccactctcccccacaggagcccaact
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgctgcgacggagagcgc
tgaaattttgcacacacacccttgagaataaactctattggcttccaata
gtttccagttccaaaagtagtcacaaaaacttgaaaacgcaaatttgaga
atatcaaacgaatatcaaacgaatatcaaacgtcaaacgtagaatatcaa
accaacttcaacttaatatgacctgtctggtcatttaAATACAACTACAC
AGCTccactcgcagctctactctaccatttttgttttgattaaattttgt
attttaatgactagccaggtctttcatttgagggctatgcatgttagcct
ccactgatgcaagttacccaatctcacggtattacagctcaataaatcaa
tgaaataatttgaaataaaaagtattaCAAAcgttgaacctttcatgaat
ccaaataaataaaagtatttatctaaagtgaagattgcatttcaaaataa
aacgatatCCAAACCAACTTAAAGACAGTGTCtgcctagcctggatatcc
aggctgtaaactatttcacagtctagtctttgatattttatgttctggtt
tacagcctggtctccctagagcgatttgcattctccatatgagaatgcag
tctGCTTGCTTGTGCTCATTTCGCTGAAGCCGTAAGGACCAATCTACACG
GTGcggagcaattctgaagcaaaaataggatagtcctccacttgctagtg
aagagagcgctttctgttacatgaaaacatgaaaaagaagaaaacagagg
caagttcattttccaagaaaacatggtctgatgtttggtcatgataatgc
atgcaaacttgttcatgggctccggtgtaatctttggatgttttaaatgg
ttttagataTTGTAAGGCTGCTTTTATTAAGTTCTGTTTTgatgccctgg
gttggctaggaaagttttggaaacatgggtttgcactttcattctctagg
gagaccaagctttataattttagaactttgtatgttgaggtaaattttgt
tttttctaaaattttgagcttggatatccaggctagtgtctgccaactaa
aaatttctctgcggggtcactgcactggcaaggagttacgacttcagact
ttagattccaattcttgtgtaggctgcaactacactgccaaatgatctgt
attacaaatacttccaaataggtccataagttaagaaaatgaaattatca
tctagcacgggggttttgtttttaaaaacaaacttcaaaataaaattgtt
aatgaacttgttacttaaaatatcacNNNNNNNNNNNNNNNNNNNNNNNa
tcacttacttacataatttatttatgatataacacccctttcttaaataa
atggcttcttaaagtcttttatgtttgccgcaagaagggagaaaaattta
atttaatttgatAAAGCGCTCccacagcattaatctttgatacgcaatGC
AGCAGGGTGCAAGTGTGACTAATTTTTAGATTAGGCTAGAGTTATCTCCT
TTCTCTGTCCTAtttcaacaatacaatgctTACATAGTTGACACATAATA
CACATTGACAGAAGTATTCTCCATGCAATGTTTAGGCTGACCctcaaaat
atttccttttccGGTCCACCAGGTGACAACAAAAAAACACGTGGTTGGCC
GCAAAAAAGATTATCTTGCTAAATTTTGATCTCAAAACTCAAATTTTGGA
AGTACTCAAGGAAGCACTCGGGGGGGGGGACTCAGAGTTTCttaaagtta
caaagaaagcgagttgataaaatgAGGTTTAGAGACGTTTATTAAAGTGA
CGAAAAAAGCGAGTGAATAAACTGAGGTTTAAAGACGTTTGTTGGGCGTT
AGTAGTCTTCAAGAGGCAGGGGTGTTAAAGTCTTGTCCCCCACGCAAGGG
AAAGCACGAGTTCttccaaaattaattctttgGTAATCAAACGCTAGAGA
AGAAAACTAACTGTAGTCATTTTTCTATGACGTAAACAAAGATCTCTACT
AAATTCAACACGaaccaaacaataaaaaaaatccaatgtCTAAACAAAAG
TTCAATGTGACAAAGCTCATCGAGACCACTTTATTTGTTTCGATTATTAA
TTCTAAGGATTGaattttttctaatctttaGTTATCAAACAAAAGCGGGA
ATCTGATGTGagcgttattttttcaaagaatccttTACCTCCATTTGATT
GGATACTTCTTTTTAAACAATCGCACAGCAATTTTTtgattggaaaaaaa
tgaaacaattgaTATCGCAGTGATTGTATGGTAAAATATTTGGCCCTTTC
ACGAGTGTTTGCAATTTAACAAGATAAATCAATGTGACTGAACGTCTGTA
AACCTGATAAAGACCTCCACTAAGAAGTTCGAAATATTGTTTGAAATAAG
ATTTATATGAAGAATGACTATTTGAACTTACATAAATGAAGAACAATGTA
AATATGGGTGATTTCTTAGTTTTTCTTCTATGTCTTCATGTACACCAATC
CGGGGAGTCTCCATATATATACCATAGGAAAGTTCATGAAACCTGCTAAC
TTTATTTTGAGTTTAGCAAATCCCCAAGATTGGCAAACAATCATTTTCGG
CTTTTCACTTTGATCCTTTATCTGTTTCTTTTTGGGTCATGTTTGGGGCA
TAATAGCAAAACATTGGTGTTCGGGCTAAGTTAAGGCAACAAAACTTTAG
ATTTTGCCTCTGAAAACCTGGCCTGAACATGCGCAGGGCAAGTTTGGGTC
ATGTTAGGGCCAAGTTGGCACCTCTACTTTCATAAGCTAAATCTTGGTAC
CATTTTCAATTTCCCAACTTTCTCTTGGAAAAAATCACAATATGTGACTC
CAAAGGCAGTTTTAAGTaattagaaaatagaaaattctataataaaatca
gcatttttaagtaaaaactcttaaccctattcaaactaggcttttagggg
cggttcagaactagggggggcttttcctgtaccaccccttaacttttgat
ctagtgggtctttttggatgaaatttggcacacaagatccttgtgacgta
aggtaacttttgacaaaaaaaattttttgatgacgtcactcatcatgccc
aaagtgagcaaaaaccgaaaatttcctttgttcttataaatagctattgt
attctaacaaaggctttagaaaaaagttgcctgagtttaaaatgcttatt
ttatcctaaatattcaaaaaattacggtctaaacgatatatttgacaatg
aaaataaatttgtattgtaaaagtgtcaatttttgtgacaccttactgtc
agaaatgtcatcatgctcaaggtgtgaaaatatttaggtgacaaattttt
ttttattttgaagctaaataaaagttaagaatttacagaaaatttcacgg
caaaagctctattatttcaggagctattagaaatagtttgacctccgaac
agaaagagccccccccccctagtacgaatagggttaatatCCCAAGTAAT
TTTTGATTTACAAGTGCCAGAAATCTTCCCACCTGTCAAATAAAATCCCC
TCCTAATTTTACAGATTCtaccatctgccaaattaataCCCgccaaaaat
tgcattttggccaaccgccaaattaagtacACATCGAAGTTGATACACTT
CGGCAACAAATACCTGGTTTTCTGAAAGTCCCATGctatatttatttatt
catgctttctttatttctttctgtttctatttcaaaaattgtctaGTCAG
AACAGTCTATAAGATTCTGAGTGTTTTTCTTGGAACGTTTTAAAGAGGTT
CAATGTTTCTGGTTGAAATCTGAAGATCATCTCGACTCTCAAAAACAATA
TCAAATCTGATCAGATATCAACTGTTAGATTATTAGATATTAACTGTCAA
TAAATCTTTAAAGGAAAACAGACTAAAAGCGGCCTGCAAAAAACAGGAAC
CTTTAGCTTTGCCAACTTTAAAGGCCCTAAGGCAATAAACAACTTACTGA
AGTGGATTCTTATCAGGTTTTAATATTGCCCAACAGCAGTTGGTTTTAAT
ATTGCCCAAATCCATCACCCACCCCCACCTCTAAGAGGTAACGAAATATT
TGGGCTGGAAGTTGCTAAGAATTTTAGCTGTTTCAATCATGTCAGGAATC
TGGGCTGTGTGAAGGTTATTTTTGAAGGGTTGTTTTAGAATTCCTTTTAA
TTGTCAGGTTACTAGATAAACAGTGTTCTACTTGAAATAATATAGAAAAT
ATGGTGTTATTTTATGAAAGGGAATTTGAGAAAGGGGAATTCCCCTTCTA
CAtgattttccaggaaaaattcaatttgGTCACATGAATTTCACTGTCAA
CAAATTTTTTGATATcttcatatttttaaacaatattcAATACAGATGCA
AACCTTTTGAGATGATTTGATGACAACTTGTTTTCACCTTTTCTATTTCT
TCAGTGTTCAATCAATATATATCTTGTTTTTATATACAGAGCAACCTAAC
AGAAGAATGGGCAAGGGAGAGAAGAAACGCCCACTAAAAATTGTCATGCC
TCCTGTTCACCAAACGCAACCTCAACCAGTGTAAGacaatttcaccattt
tattttatcattctCTAATTTAGCTCAATGGAGCATTTTTTTGCATATCG
ATTCTGCTTCATCATTAACATTTTGTTTAACAAGCAACTATATTTTGCAA
TTAatgtatttttgtgaaaaaaaagctaaaaaacttGTTTAGTAGGAACA
TCTCTAttgtttttagaaatgctccaAGGAATTTATCAGATAGAACCACA
TTAACTGTGAACAGCCAGGTAAGTAGTACGGCTTAATGAATAATATTTGA
CTCATTGACACAATGTGTGACCAATCAAGTTTAAAGACAGTAATGGGATA
CTTACTTGAAATCCCGCAGACTTTCATAGTGGTATAAGGGTatcaaccat
tgagtttaaaggcaaatgggctagagaggaatcttcagcCTTTCTCCCCT
TAAtttttgttctgtttttatgGGATGCCTGATGAGACTTTGCCCTTTTT
TGTTCTTGCATAATCCATTTTTCGAAACCAGCTAAGAGTTTCTCTAACCc
cgcttcaaactcaatggtatcaaccaggccatattttagaaaggcaaggc
agcgtccgttggtggccaaaaagggcactttttcttatgtttttccacta
aaaaggctgtttttaccaatattttagtaatttcaagagGGGCAGTGTCC
GATAACCGGACgcttaaagggcatgaaaaatggcctgtcAACCCCCTCAC
AGATATGACATCTCCTAGATTTTTTACTCCACTCCTTCCCCTATAGGAAT
GTGTTAGTGCTTTGATAGTTTGATGTTGTACCTATCATAAAATGTCTATT
GAATTTTCGCTCTTTTTCTTTCAGGATTACCCGTGCAGTACTGATGATTT
GATAGAAATATGCGAGCTTGGTCGTGGGGCCTATGGGGTTGTAGAAAAAA
TGAGACATAAACAAACTAACATAGAAATGGCTGTGAAGGTTTGTTCATTC
TCAAAATCCCAGATCTTGATTGAAAATCTTCATCTCTCTTCTTGTTTTTT
TAGATTGAACTAATTTTTGACTTTACTAAAAAGCATTGTTGCTACCTTTC
AATTTACTTTAGCCCATTAGACCTTCATATGCAATGTCTAACTAAGTACT
TCAtgaaaatttacaataaaagtGACAAGTTATAGATTTAACTTTTACTT
ACACACATATTTTTAGGACTTCAATTCAAATTCTAGACTGTTATATTTGG
TAACTTTGCTTATTTTATAGCGTATTAGGCACACGGTCAACACGACAGAG
CAAGGTCGTCTATTAATGGATTTAGATGTTTCAATGAGACTTAGTAATTA
CCCCTATGCCATCCAGTTTTATGGTGCACTCTTCAAAGAGGTAAGTCTGA
TCTATTTTTTCAGGATATTCCTAAACAGAATAAATTTTCAcggttaattt
tttttgatggacAGCATAGCTATTATATATCTTTAGGTTAAATATGTACG
AACAAGGTGCTCATgttaatcttttgttttttttctaggGAGATGTTTGG
ATATGCATGGAACTCATGAAAACATCATTCgataaattttataaaaaagt
tgcAGAGCAAGAAGGGGCTTTGATACCTGAAAAAGTACTGGGAAAAATAT
CCTTCGCTGTAAGtgttctttgtttttttgattCGTGTTTTTAAAATTCC
AGTCCTTCTTTCATAGCAGATCCATCCTGCGCAAACCACGCTCTGCTGTA
AAGTGATGGCGTGAATGTGacgatctgacctggttgttcagcTAAAACAA
TCAAAACCGCACCACCTCttgcgaaagtgaaagtgcatGGCCATTCAAAT
TTGTTCAAGTCAAATGCAAGGAACATGCATATCCCTTCAAATTACACAAA
TAAATAAAGTCACAGTCAATTTAAGGTCGATTCTTGACTATTTTTAATAC
AGGTGTTTCTTAAAAACGAAATTCTTATATgaatactttttgctttttca
gGTTGTTTCTGCATTGGAATATTTACATAGTAAAATGAAAGTAATCCACA
GAGGTGAGATAATTATTCGGTTATAAGTTGTTCCCAAAGACAATGAAAAT
TTGGGTAAAGTTCTTCGAAAAATTCTCAATCCCTTATAATTAATTACGAA
TTCATCAGAGTAAGCATTCACCCACGACTTATAACTTGTTATCGAAGCTT
ATAAATATAGCTGAATCTATAGATTTTATCATTCCCTGAGGATGGAANAA
AGCTTAGAAATATACCTGAATCTATAGATTTCATCATTCCCTGAGGATGG
AAATcttgaatgttttttatttacgaTGAAATCTTTCTTAGATGTCAAAC
CGTCCAATATATTAGTTAATGATAACGGAGAGATCAAATTATGTGACTTT
GGAATCAGCGGACAACTGGTTGACTCTCTGGCAAAAACCCTTACAGCTGG
CTGTAAGCCCTATATGGCTGTATGTTATAAAATACTTATACTTTACTGAT
AACTCCTGTTATTCTACTGTCTCTCTCTTTTCATCTAACACAAGTTCTAT
ACGTTCTTAAATGACCTTCTGATTGCTGTTAAGCTTTCTCATTCCCAGGG
GAAACATTTCAGGTGCATTTCCAGGATCTTTCTAATGTTTTTCCTGGGTA
TACtggaaaaataattcttttgcTGCTTGCAAATACGTAACAAACAATGG
CCTTGTGACTGACCACCTAATAAGTTGAAGCTACTTTCCTACCTACCCAG
AGCGTTGGTTTTTTACGTTGTTAAAGTGGCGATAGGAAAGCTTTGCCGTG
AATGAGAAAGATTAAGCCATTCTATGTTATATTTGACGGTTGAGTCTGTC
AGGTTCACGAACTAAATAAATCAAATccgataaaaaaaaattcttctttg
gAAGTGTTTACACCGCAACATTACCCTAACTTTCGAAAGTCTGTTCCGAC
TTAGAAATCAACTTCCAAAGCAAAACCAATAAGTAGTGAACAAGAATTTC
GTCACCGGTAAAGTAGCAAACTTCCCTTAGGTAGGGCGATTCTCTGAGGT
TTCCACTGCGTTAAGGTAAAATTAACTTTAAAAGTATTTAAATCGAGCTA
CATTTTACATTTCAGCCTGAACGTATCAACCCAACGAAGGGACAACATGG
TTATGATATACGTTCTGATGTGTGGAGCTTAGGAATCACCATGGTTCGTT
TGAATGATTTTTCCACTCATATTCTCaatttcagttgagctagaatctga
gaatgtatGTCAGTCAGTCTGTATGTCAGTCACctcaaaactttagggca
ggctggagacttcaaaaatggtccgattcggctgaaattttgtacacttg
ctccttgggtgaatacctgggggtgtttttttcatttttttttcattttt
tttccaaattctgATTCtaacaatctttttttttttattccatttttttt
attgttacaattgggcctacgagtAATTAAGAAGATACCGAAGTTGATct
agtgcggttagcacgttcgacagttttGTCACTGTTGCTACACGTTTTGG
ATGAAATTAATACAATGAACTCTagctttaactcgaacctctataactgg
aATGTCTTCTTATTTCGAACAAGTTTAATGGTCCttttagttaacaatgc
cttataagccttactccataactcgatatttccttaactcgaacagatTT
ATGTTCCCTGCgcgtgttcgaattatggaatcTCCACTGTATAAATTTCA
GTTTTCTGATTTGTTTACATACAGGAGTCGTCAATTTTCATCGCTAATTT
TTAATACGAaatttactttaatgggataaactttcgcggggatgggtcta
tccgcgaaattcaaaaacttcGCCGGGACTTGATTTCGCGGATGAGGAGT
TCCCTGAGTTTTCGTATAATTTCGCTGACCaggattaaattaaatttttc
taaagtgattgcaaattttgcaaaatcggGGTAGCAAACAGAACttctct
caaaattttgatattgtagtatgtgaaaattcgaaaaataatgAAGAGAC
TTTCTTCCAAGCAGCAGGGTTTGAGTAGTCTGATTTGCGGGACGAAAAAC
CGACgatagaaatttgaaattttcgcgaatcgaagaaagatttcaatcat
ttcgcgggtacttaatttcgcggatgaggcccttccaaattttcattggg
acttaatttcgcggatttttgcggatgacacccaaatccgccagaaatct
gcgaaatttaatccccgcgaaagtttatcccattaaaagtAGGTGACATG
ACTTGTGCCGTACTCCTAGATTTCAACATTACTAACAGAACTTTTGGACG
CGtgtattttaaaaacaatttttcttcACCTTTCatttctaaataaataa
aataaataaataagtcaGACCTGAAGTCTGTTTCCGCCATCAAATTTGAA
GATTGCAttgtatttttttatcattgagTTGATAAGCAGGTCGGAATATT
GTTTATTTCAACTCGTATAAGAATGACCATGGAAATGTATACTTACTCCA
TTCACTTTTagtgtattcatgatatgcaccattgcaatgtcttctgacat
tacatcatggaccaaatagctgattggttgtaagtgacgtaagatcagtc
aatacgtcactttcagccaatcagctgttgggtatGTGGAAGACATGGTA
TTCTATTAGTGAGATTTCCACATGGTAGCAAAAAAGAGTGCACGCTTAAA
GCGAATgtatttattgtttattttaacTCGCATAAGAATGACCATGGAAA
TATATACTATAGTCCGTTCGTTTAAATGCGTACTCTTTGCTACGGTGTAG
AAACCATGTCAGCGTGATTCAGACTAATTCCCTTGGGACTGGTTTCCACT
TGGTagcaaaaaagagtgcacacttcaAGCGAATGTATTTTAAATTATAT
TTCAATCCAGGTCGAACTGGCATGTTTGAAATTCCCCTACAGCAGGTGGA
CAACACCTTTCGATCAATTAAAAGCAGTGGTAGAGGAGCCTTCGCCTACG
ATACCATCCGAACATAATTATTCTGATGAACTTCATCAATTTATTTCACT
TTGGTAAGAACTTTCTCTTTTGCTTGGCTAGTTAGGTTGTTCCATTTAGT
ATCCATCCAGGGCAGtgaaaatattccaagtcaaaaataattcttgaaaa
tattgGANTTATCTTTCCAGGTCGAACTGGCATGTTTGAAATTCCCATAC
AGCAGGTGGACAACACCCTTCGATCAATTAAAAGCAGTGGTAGAGGAGCC
TTCGCCTACGATACCACCCGAACATAATTATTCTGATGAACTTCATCAAT
TTATTTCACTTTGGTAAGAACTTTCTCTTTTGCTTGGCTAGTTAGGTTGT
TCCATTTAGTATCCATACAGGGAAgtgacgaaccttttcaagccagaaat
aattcatgaaaataTTGGATACCCCTCGGAGAAATGGTAGAATTGCAAAA
AATGCCCATGGAAATTGAGTCTTTCCCCTGAAAAGTTCTGGAATAAATTC
GACGAGATTTCAAAGAAGggaagtatttaaagaggtttctACAAGGTACA
GGAAACTTTTTTAGGACTCAAAAACTGACTTCAATTGATATAAGCGGTTT
TGGGTTTTATTTTTTGGGGTAAGGGGTTTTTCCTGTGACGACGTTTTTTG
ATCCTAAAAAAGCCTTAGCAAATACCCCAATCGCGAAAAATTCTCTAAAT
ACTTCATTCTTTAAAATGGGCCAGGTTTGGTTGCGTCGAATAAAATATGT
CAAGGTCCGAAGGGTTTGTCCCCCTACTTATACTGGTACCTGTCAGCACA
GCTTACTATATCTAGCTATATGTACCTACCATTATGTTATAGCCGAAGGC
TAGAGCCGAATCCCCTATATTTAGGCTTATTTCCTAATAAAGTTGCGTGG
GGTTGCGTGTCCCGCGTGGTTTTCAaacaaacgctggattgaaaTTTACC
CCCAGAAttcgaaaaatgtaaaaaggAGCTAACAAAAAAATGGCTCGATT
AAATCAACCATCCGAAAAACGTCgtacattttaaggcttcactttttcta
gcttgggaaaggttaaagattcctcTTTAACATATTTGGCTTGATACTCA
ATTGTACTAACTTTGTCAAGAGAGTCTTTGTTTGAAAGATCGGGAAAAGC
TTTTATTCATGATATATGcaacattgcaatgtcttccacggactcaatag
ctgattggttgaaatgaCGTATTGACCAATCagttgttgggtccgtgatg
taatgtcagaagacatcgcaatggtgcatatcacgaaTACTTGTATAATC
TTGCTCACATTTGCTATTTCGGAAGTATCATCGCAGTGTGATAGCTACTC
CTATCTAATTATTGAATGGTGAATTATGTCAAACCTTCTTCCTTGCAATA
GAAAATTCTACATAACATGGTTTGAGAGcagatcattttatttttgcaaa
aagatatAGCTCTCGTTTTGCATAATACACGATCTCGCTGTTAGTGATTC
GCACATGAATACTTCCCCCCCTGTTTGATATTCTCAGTATAGGTCAACGA
GAAAAGGCTTTGAAAGGATAAACAGTTAAATATTTAAAAGGCACTTGCtg
ttttttaacgttttttgtgttttaataCTGGAGAGAGCTGAACTGTGTTA
TTCGTTTCTTTAAATATTGGAAAGCTCTATCTACACTGTCAgtgtttttg
aaatataatagttTTAGTTTTGAGGGCGATCTATTCGGGTAGAGAGTTTT
TTGAATGtctcttttttaaataaaaacttgtcGTCTAATCAATTGATTGT
ATCGATATTTTGTATGAATTTCTGACTTTTCCtattttcagtttgaagaa
GAACTTCCTGGAAAGACCAAAATATGACACTCTATTGGTACGTTAAGCGA
AACAATCTGTGACTAAATATTGTGGCAAGAactcccccccccctagtaTA
AATGTTGATGGGTGGAAAGGCTGCCACCAGAAAAAGCTCAAATCAACCCT
GATTTTAGGGGgggattttttaagaaattgcaacatattttgtcactgat
tgtagttgATTAGTTATATATATCCGGCCTGGACTTAACcctattaaaaa
aattgaaaatcgcaATTAAGATAAAATTTTCATGTTTATTCTTGCCGTCT
GCTGATTTTTTACTGGAATGTCATTACTGTCATTTTAGACATTTATATCT
ATTTGCAGCCATCATAGTTTCGACTTTTAGACTAgaaatagctttcaaat
tcaCGTTTCTTTACACGATATTACCTCGCTTATCTCCAAGCATCAAACAA
CAGTCAGAGTTATATACTTATCgtattttgttccttttttttcAGACGGA
CTCATTCATCCTGACTCACGAGAAAACACCGGTTAACGAAATCGCAGGCT
TCGTTCAACCCATCCTGGACCAAGTATGAATGACTAAACGTCACATGTCA
ATCAAATGACGTcatatgacgtaatcttttcgaAAATGGGAGTGTCTTTA
CAATTcaagtttttttggcaaattgtGCTGGCTATGACACTGCTTGGCTT
AAATGACGTCACTTTCTATAAGAAATCGAACCACAGAAATTCATCGAATG
AATATACCTACCAGCCCTCGTGTCGTATAGAACTCTATAAAAGCGGACCG
GACTTCAAGTTTACTGGGACCGAATGACACCAATCAGTCTCAAGTCAATA
TTATGACTCTCACAGCTTTtagaaatatttgacgtcattcGATCTCGATA
AACTCGGGTCCAACCCCCTTGAGTTGATTGGTTTTATTCAAAGCCTAAAA
GGCCTGAGCTTTAAAGACATTTGTTACATTGTTAGTTCGATGTAAATCGA
atattttttatagttttttgtGGAGAAAGCGAAATGAATTATGGGAATGT
TGCATTGCATTGCTTGGCAATGTTAGTGCTTAGTTTTCATCTTTCGTCAA
ATCAGCTTTTTCTTGTTAAACGTtgtttagctctagtttagacggcccat
cttttgccctgcctattctgattgtgaattaaagtgggctgtctaaagtc
aaagCAATGTCCTCTTTTGACGCTAATGCAATATTGTCttctttcaaact
tttccagcttttccaagcaaagattttaactaccAAGTTTGTGCCCTCTT
TCTATCTACTCTAACAATTAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041298XLOC_041298Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065912-exon-scaffold_448-1491911889:528596..528855TCONS_00065912-exon-scaffold_448-1491911889:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:528596..528855TCONS_00065912-exon-scaffold_448-1510915933:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:528596..528855TCONS_00065912-exon-scaffold_448-1575043694:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:536285..536375TCONS_00065912-exon-scaffold_448-1491911889:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:536285..536375TCONS_00065912-exon-scaffold_448-1510915933:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:536285..536375TCONS_00065912-exon-scaffold_448-1575043694:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:536562..536613TCONS_00065912-exon-scaffold_448-1491911889:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:536562..536613TCONS_00065912-exon-scaffold_448-1510915933:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:536562..536613TCONS_00065912-exon-scaffold_448-1575043694:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537220..537333TCONS_00065912-exon-scaffold_448-1491911889:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537220..537333TCONS_00065912-exon-scaffold_448-1510915933:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537220..537333TCONS_00065912-exon-scaffold_448-1575043694:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537616..537735TCONS_00065912-exon-scaffold_448-1491911889:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537616..537735TCONS_00065912-exon-scaffold_448-1510915933:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537616..537735TCONS_00065912-exon-scaffold_448-1575043694:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537884..538003TCONS_00065912-exon-scaffold_448-1491911889:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537884..538003TCONS_00065912-exon-scaffold_448-1510915933:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537884..538003TCONS_00065912-exon-scaffold_448-1575043694:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:538347..538398TCONS_00065912-exon-scaffold_448-1491911889:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:538347..538398TCONS_00065912-exon-scaffold_448-1510915933:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:538347..538398TCONS_00065912-exon-scaffold_448-1575043694:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:538687..538814TCONS_00065912-exon-scaffold_448-1491911889:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:538687..538814TCONS_00065912-exon-scaffold_448-1510915933:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:538687..538814TCONS_00065912-exon-scaffold_448-1575043694:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:539461..539538TCONS_00065912-exon-scaffold_448-1491911889:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:539461..539538TCONS_00065912-exon-scaffold_448-1510915933:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:539461..539538TCONS_00065912-exon-scaffold_448-1575043694:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:541306..541408TCONS_00065912-exon-scaffold_448-1491911889:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:541306..541408TCONS_00065912-exon-scaffold_448-1510915933:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:541306..541408TCONS_00065912-exon-scaffold_448-1575043694:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:541669..541708TCONS_00065912-exon-scaffold_448-1491911889:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:541669..541708TCONS_00065912-exon-scaffold_448-1510915933:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:541669..541708TCONS_00065912-exon-scaffold_448-1575043694:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:543237..543282TCONS_00065912-exon-scaffold_448-1491911889:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:543237..543282TCONS_00065912-exon-scaffold_448-1510915933:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:543237..543282TCONS_00065912-exon-scaffold_448-1575043694:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:543741..544571TCONS_00065912-exon-scaffold_448-1491911889:543741..544571Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:543741..544571TCONS_00065912-exon-scaffold_448-1510915933:543741..544571Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:543741..544571TCONS_00065912-exon-scaffold_448-1575043694:543741..544571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:528596..544571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.28209	8.61979	15.2811	19.8887	30.5082	29.408	41.0327	55.2124	34.4383	37.6026	21.9275	19.2312	20.3063	24.8516	15.0778	15.1798	13.4623	17.1228	8.85399	12.9967	14.6953	15.3981	12.6411	14.5774	27.9728	21.0152	9.44705	12.2423	15.2782	11.7982
Blast
[Close]
BLAST of TCONS_00065912 vs. Swiss-Prot (Human)
Match: MP2K6 (Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 2.457e-130
Identity = 196/333 (58.86%), Postives = 244/333 (73.27%), Query Frame = 2 
Query:  284 KGEKKRP-LKIVMPPVHQTQPQPVNAP-RNLSDRTTLTVNSQDYPCSTDDLIEICELGRGAYGVVEKMRHKQTNIEMAVKRIRHTVNTTEQGRLLMDLDVSMRLSNYPYAIQFYGALFKEGDVWICMELMKTSFDKFYKKVAEQEGALIPEKVLGKISFAVVSALEYLHSKMKVIHRDVKPSNILVNDNGEIKLCDFGISGQLVDSLAKTLTAGCKPYMAPERINPTKGQHGYDIRSDVWSLGITMVELACLKFPYSRWTTPFDQLKAVVEEPSPTIPSEHNYSDELHQFISLCLKKNFLERPKYDTLLTDSFILTHEKTPVNEIAGFVQPIL 1276
            KG+K+ P LKI  P     QPQ  + P R+L  +  +++ +Q++    DDL  I ELGRGAYGVVEKMRH  +   MAVKRIR TVN+ EQ RLLMDLD+SMR  + P+ + FYGALF+EGDVWICMELM TS DKFYK+V ++ G  IPE +LGKI+ ++V ALE+LHSK+ VIHRDVKPSN+L+N  G++K+CDFGISG LVDS+AKT+ AGCKPYMAPERINP   Q GY ++SD+WSLGITM+ELA L+FPY  W TPF QLK VVEEPSP +P++  +S E   F S CLKKN  ERP Y  L+   F   HE +   ++A FV+ IL
Sbjct:    5 KGKKRNPGLKI--PKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD-KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE-SKGTDVASFVKLIL 332
The following BLAST results are available for this feature:
BLAST of TCONS_00065912 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MP2K62.457e-13058.86Dual specificity mitogen-activated protein kinase ... [more]
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