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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065751 ID=TCONS_00065751|Name=TCONS_00065751|organism=Clytia hemisphaerica|type=transcript|length=297bp
NNGGAAATTCCAAAGCATTGTTAGAAAAGACGCAAGACATGGATCCAACA
TCTCCAATCAAAACAGTTGTCAAGAGGTCGTCTACAATTCAATGTTTATT
ACTGCGAGTGACTTGTCAGACAAATGCTGATTGTATCCAAGAATGCGACT
CAAACTACGAGTGTATAACGGACTTCAATGTTTGCGCAATTTCGGGCACG
CCTCTTTTTCCACAATCATGATCTCATTCAATAGGATACTGTATTTtaat
aaattcatttttctaTAAAGAATAATTGAATCGATATCagcaaataa Run BLAST on NCBI transcript from alignment at scaffold_444:7296..9137+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065751 ID=TCONS_00065751|Name=TCONS_00065751|organism=Clytia hemisphaerica|type=transcript|length=1842bp|location=Sequence derived from alignment at scaffold_444:7296..9137+ (Clytia hemisphaerica)
NNGGAAATTCCAAAGCATTGTTAGAAAAGGTAATTAATTTCCATTCGTCA
CATCTTCATTTTTGGTAATATTACGGGCTTGTATCCCGTGGGACCCTACT
CTTGGGACTCGGGGGACCCTACCTAAATTCTTTCATTTCCATCTCATCCC
TTTGTTTTTAAAGCAACACTGAGGCATTATTCCAACTGGCAACTCTATTG
AATTGATAAGAATTACCGGTAGAATCTTTAAGCTGTAAAAGTGCCAATAA
ACACAATAAGCATTTAGGTTCTTCATTTTATTACTATTAGATCAAAATTC
ACAGCGGAAAACCCTTGTTATGAAAATGATGAGCTAGCTTGCTAAAATTA
TTTCTGATCATAACTCTTTGGAAGTTTAAGTACAagtttcttttatcatt
ttgcACATTATAACTCGAAGCCGTACGGGAAACACACATATTTTTGAGtt
taagtaatttttatttatggggccccggggggggggggggcattgaCCTT
GAAAGCCGACGGGGATTTGCGACAGGAGTCTGAAAAGTGGGCCCTGTCAT
TTTCTATCTTTTACCTTGAAAAGttgtaaaaattattaaaattagacgaa
aaataaaaaaaaaatctaattttcactttcaaagTTATCCAAAATAAGCA
AAAGTTGACCCTATCAGATGTACATTTTGAAATCAGTAAATTGCCTTGTC
TCTTAGATAACTTCAGAGCCataaaaagggaccctgaccagcggcacatt
cccgtacccaattttgcctaagtgcccccggGTTATGGAGttaggtttat
aaggcattctTATCTGAATGatccataaaacttgttcgagttaaggagac
attcgagatttagaagttcgagttaaatAGACATTCGAGATttagaagtt
cgagttaaatAGACATTCGAGTTttagaagttcgagttaaatAGACATTC
GAGTTttagaagttcgagttaaatAGACATTCGAGTTttagaagttcgag
ttaaatAGACATTCGAGTTTTAGAAGTTCGAGTTAGATAGACATTCGAGT
TttagaagttcgagttaaatAGACATTCGAGTTttagaagttcgagttaa
atAGACATTCGAGTTttagaagttcgagttaaatAGACATTCGAGTTTTA
GAAGTTCGAGTTAGATAGACATTCGAGTTttagaagttcgagttaaatAG
ACATTCGAGTTttagaagttcgagttaaatAGACATTCGAGTTTTAGAAG
TTCGAGTTAAGTAGGCATTGGAGTTTTAGAAGTTCGAGTTAAGTAGACAT
TCGAGTTTTAGAAGTTCGAGTTAAGTAGACATTCGAGATttagaagttcg
agttaaatAGACATTCGAGTTTTAGAAGTTCGAGTTAAGTAGGCATTGGA
GTTttagaagttcgagttaaaaagacaTTCGAGTTTTAGAAGTTCGAGTT
AAGTAGGCATTCGAATTTTAGAAGTTCAAATTANTCGAGTTTTAGAAGTT
CGAGTTAAGTAGGCATTCGAATTTTAGAAGTTCGAATTCAAGCGACTTCA
CtgtatttcaaattgtttcttCAGACGCAAGACATGGATCCAACATCTCC
AATCAAAACAGTTGTCAAGAGGTCGTCTACAATTCAATGTTTATTACTGC
GAGTGACTTGTCAGACAAATGCTGATTGTATCCAAGAATGCGACTCAAAC
TACGAGTGTATAACGGACTTCAATGTTTGCGCAATTTCGGGCACGCCTCT
TTTTCCACAATCATGATCTCATTCAATAGGATACTGTATTTtaataaatt
catttttctaTAAAGAATAATTGAATCGATATCagcaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065751-exon-scaffold_444-1491911889:7296..7324 | TCONS_00065751-exon-scaffold_444-1491911889:7296..7324 | Clytia hemisphaerica | exon |
| TCONS_00065751-exon-scaffold_444-1510915933:7296..7324 | TCONS_00065751-exon-scaffold_444-1510915933:7296..7324 | Clytia hemisphaerica | exon |
| TCONS_00065751-exon-scaffold_444-1575043694:7296..7324 | TCONS_00065751-exon-scaffold_444-1575043694:7296..7324 | Clytia hemisphaerica | exon |
| TCONS_00065751-exon-scaffold_444-1491911889:8870..9137 | TCONS_00065751-exon-scaffold_444-1491911889:8870..9137 | Clytia hemisphaerica | exon |
| TCONS_00065751-exon-scaffold_444-1510915933:8870..9137 | TCONS_00065751-exon-scaffold_444-1510915933:8870..9137 | Clytia hemisphaerica | exon |
| TCONS_00065751-exon-scaffold_444-1575043694:8870..9137 | TCONS_00065751-exon-scaffold_444-1575043694:8870..9137 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_444 | supercontig | scaffold_444:7296..9137 + |
Blast
The following BLAST results are available for this feature:
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