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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065748 ID=TCONS_00065748|Name=TCONS_00065748|organism=Clytia hemisphaerica|type=transcript|length=1288bp
AATGACTATGGTTTAAAACACCAGCTAATTGGTTTTGAAACTCTCTATTG
CATGCACACATGCATTTGATGTGGTGGAAATGGAACAAATTAATTTTGAT
AAATTAAAAAAGGAGAATTTCAATATTTAAGATAAGAGCAGTGCTTCCAA
ACGGTAGGAGTTTACGCTCCaaacgaaggaagatatgacgtagtcTACCG
ATACCTCAACTAATACAGAGTAGTTTAACCTGAGaccagattgtgattgt
tttctgcacaccacgctgaagctctatgaaaacataaaaatctgacgaat
atgcaatctcgaaatcgtaaggaccgcgttcgtctaaaggGACtagggat
gacaacaaagttgcgagattgtgtttatgaatagggcgtcGTATCACCGT
TTGACtctctggcgcacaacaagatttttCCGTGGGAGCACTATTTTCCT
cgctcagatgtataattttcaagcgccttcagaggtttaccgtgcgcgta
agaaaattatgaacagctatTATCAGGTTAGAGTAGTGAAGCTCGTAATA
TTAAAAACGATAGCATACATTAAGTTACATTCATGACACCACaatatttt
tcttcgttttgTTAGCAATTTTTTTCTGCCATGTGTTTATGGAACATTGT
GCCATTGTGCCACGTATACAGTGCTCGGTAGTGTTTGCTTTCATAGCCTA
GCGAATAGTTTTTATTTGACACATGCTCGGCGGACGATTctctttatttt
tctcttagGGTTTTTTGTCGTGCATTGATTTGTGGATTAAGTTTTCAAAC
GCAGGTAGTTCTTGTCACGCACGTGTCATcttcatagatttataaagccc
gaagggctagatgtcgtgctttagcCATTGCaggcaaaaaagtgaatatc
agaaaaaatattgttggtattgtttttgaaaatccgCGAAgctttctgat
tggtcaagcggtagaattctattgtaatgtcacgtgacttaggtaggatt
gcCTACCTAACTAACAACGGGatacttttcagcaaaagtacgccatctaa
cccttcgggctttataaatctatctACGGCCACCTTCCGCGCCACCGTGT
CAGTCACCTTTTTGAAGAACAGACCCATCGCGATCTAGCTCTTTACAAAA
TTAGCTTAATTAATGGAAGTTTAATTGCACTGATAATTGTTAATTTCTCA
ATCGTGAAGTTTCTTTTCGATATTTTGACAgataaatcaaatattttgat
tttattttagcatttttgttTCACAAATAGATTTGCCT Run BLAST on NCBI transcript from alignment at scaffold_443:373114..374401 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065748 ID=TCONS_00065748|Name=TCONS_00065748|organism=Clytia hemisphaerica|type=transcript|length=1288bp|location=Sequence derived from alignment at scaffold_443:373114..374401 (Clytia hemisphaerica)
AGGCAAATCTATTTGTGAaacaaaaatgctaaaataaaatcaaaatattt
gatttatcTGTCAAAATATCGAAAAGAAACTTCACGATTGAGAAATTAAC
AATTATCAGTGCAATTAAACTTCCATTAATTAAGCTAATTTTGTAAAGAG
CTAGATCGCGATGGGTCTGTTCTTCAAAAAGGTGACTGACACGGTGGCGC
GGAAGGTGGCCGTagatagatttataaagcccgaagggttagatggcgta
cttttgctgaaaagtatCCCGTTGTTAGTTAGGTAGgcaatcctacctaa
gtcacgtgacattacaatagaattctaccgcttgaccaatcagaaagcTT
CGcggattttcaaaaacaataccaacaatattttttctgatattcacttt
tttgcctGCAATGgctaaagcacgacatctagcccttcgggctttataaa
tctatgaagATGACACGTGCGTGACAAGAACTACCTGCGTTTGAAAACTT
AATCCACAAATCAATGCACGACAAAAAACCctaagagaaaaataaagagA
ATCGTCCGCCGAGCATGTGTCAAATAAAAACTATTCGCTAGGCTATGAAA
GCAAACACTACCGAGCACTGTATACGTGGCACAATGGCACAATGTTCCAT
AAACACATGGCAGAAAAAAATTGCTAAcaaaacgaagaaaaatattGTGG
TGTCATGAATGTAACTTAATGTATGCTATCGTTTTTAATATTACGAGCTT
CACTACTCTAACCTGATAatagctgttcataattttcttacgcgcacggt
aaacctctgaaggcgcttgaaaattatacatctgagcgAGGAAAATAGTG
CTCCCACGGaaaaatcttgttgtgcgccagagaGTCAAACGGTGATACga
cgccctattcataaacacaatctcgcaactttgttgtcatccctaGTCcc
tttagacgaacgcggtccttacgatttcgagattgcatattcgtcagatt
tttatgttttcatagagcttcagcgtggtgtgcagaaaacaatcacaatc
tggtCTCAGGTTAAACTACTCTGTATTAGTTGAGGTATCGGTAgactacg
tcatatcttccttcgtttGGAGCGTAAACTCCTACCGTTTGGAAGCACTG
CTCTTATCTTAAATATTGAAATTCTCCTTTTTTAATTTATCAAAATTAAT
TTGTTCCATTTCCACCACATCAAATGCATGTGTGCATGCAATAGAGAGTT
TCAAAACCAATTAGCTGGTGTTTTAAACCATAGTCATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065748-exon-scaffold_443-1491911889:373114..374401 | TCONS_00065748-exon-scaffold_443-1491911889:373114..374401 | Clytia hemisphaerica | exon |
| TCONS_00065748-exon-scaffold_443-1510915933:373114..374401 | TCONS_00065748-exon-scaffold_443-1510915933:373114..374401 | Clytia hemisphaerica | exon |
| TCONS_00065748-exon-scaffold_443-1575043694:373114..374401 | TCONS_00065748-exon-scaffold_443-1575043694:373114..374401 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_443 | supercontig | scaffold_443:373114..374401 . |
Blast
The following BLAST results are available for this feature:
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