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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065505 ID=TCONS_00065505|Name=TCONS_00065505|organism=Clytia hemisphaerica|type=transcript|length=918bp
cTGGGACaggttggagacttcaaaaatggtccgatttagctgaaattttg
cacacttgttccttgggtgaatttCTGGGagctttttttcatattttcaa
aatgttgactCTTAGGGGTGTGGTAAcaagttttagcctcaaaacaaggc
taaaaactttggggcaggcttgagacttcaaaaatattccaattcagatg
aaattttgcacacttgttccttgggtgaatatctggggtatttttcattt
ttaaaaattttgattcaatAGGGGCGTGGTCATGAGTTTACCCTCAAAAC
AAGGCTGAAAACTTTAAGGCAAGCtcgagacttcaaaaatggtccgattt
taGCTGAGTAACagcaaaattctttgaaacttctccatttccattttttt
acactggcacaataaaaaaatctttcatgagATTCGTAAAGTGCACTATG
CAATGGTTCAATTGCAATTCTACCGATTTTGTCtttcaaataactttttt
tattgcaCTAGACAGGTAACATTTTTTTTGGGCCGGCCTAATAACTAGAT
TTTCCTTACTTACTATGCTTTAGAAACGTCTGAAATTAGGTTGTGGTGTG
TCATTCAGGTAGTTAGATAATTCTTTTTACTTATATAGGTTCATAAGGGA
ATAACTGATAGTTTTTGGATGGGTGTAGCTCAAGAGAGAGAATCCAATAA
AACATGCGTACCCTGCTTCCCTCACTCAGGAAAGAAcaatataaaatgta
aaatattttttgatattcattcttttttgacaGGTTCAACCCCAACAAAG
CTGAAATGCAcaaagaattcaaaattgaCAATTCACTCAGATTACACCGC
AAGTCAAacatGGCTCTTCCAACCATAGTACCAACTGAATCAAAATTCGA
AAGCTGATGAAAATTCTT Run BLAST on NCBI transcript from alignment at scaffold_44:183783..184924- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065505 ID=TCONS_00065505|Name=TCONS_00065505|organism=Clytia hemisphaerica|type=transcript|length=1142bp|location=Sequence derived from alignment at scaffold_44:183783..184924- (Clytia hemisphaerica)
CTGGGACAGGTTGGAGACTTCAAAAATGGTCCGATTTAGCTGAAATTTTG
CACACTTGTTCCTTGGGTGAATTTCTGGGAGCTTTTTTTCATATTTTCAA
AATGTTGACTCTTAGGGGTGTGGTAACAAGTTTTAGCCTCAAAACAAGGC
TAAAAACTTTGGGGCAGGCTTGAGACTTCAAAAATATTCCAATTCAGATG
AAATTTTGCACACTTGTTCCTTGGGTGAATATCTGGGGTATTTTTCATTT
TTAAAAATTTTGATTCAATAGGGGCGTGGTCATGAGTTTACCCTCAAAAC
AAGGCTGAAAACTTTAAGGCAAGCTCGAGACTTCAAAAATGGTCCGATTT
TAGCTGAGTAACAGCAAAATTCTTTGAAACTTCTCCATTTCCATTTTTTT
ACACTGGCACAATAAAAAAATCTTTCATGAGATTCGTAAAGTGCACTATG
CAATGGTTCAATTGCAATTCTACCGATTTTGTCTTTCAAATAACTTTTTT
TATTGCACTAGACAGGTAACATTTTTTTTGGGCCGGCCTAATAACTAGAT
TTTCCTTACTTACTATGCTTTAGAAACGTCTGAAATTAGGTTGTGGTGTG
TCATTCAGGTAGTTAGATAATTCTTTTTACTTATATAGGTTCATAAGGGA
ATAACTGATAGTTTTTGGATGGGTGTAGCTCAAGAGAGAGAATCCAATAA
AACATGCGTACCCTGCTTCCCTCACTCAGGAAAGAACAATATAAAATGTA
AAATATTTTTTGATATTCATTCTTTTTTGACAGGTTCAACCCCAACAAAG
CTGAAATGCACAAAGAATTCAAAATTGACAATTCACTCAGATTACACCGC
AAGTCAAGTAAGTACTGAATGTCTGTTTAACTATTCAGATGTTGAAAGAT
GCCTGTTAAACAGATGGCCGAACTGTAAAAATCACCAATATTTGGTCTGT
ATAGCTCAGTACATTGAAGGCTGTGAACAAGAATTTGTAGCCTTCGTAAA
TACTTAAAAAATTCATTGCTTGAGATTTAAATGGAGTTTGTGGTAACAAT
TCAGTAATGAGAAATTCTAATATTTTTTTAGACATGGCTCTTCCAACCAT
AGTACCAACTGAATCAAAATTCGAAAGCTGATGAAAATTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065505-exon-scaffold_44-1575043694:184068..184924 | TCONS_00065505-exon-scaffold_44-1575043694:184068..184924 | Clytia hemisphaerica | exon |
| TCONS_00065505-exon-scaffold_44-1575043694:183783..183843 | TCONS_00065505-exon-scaffold_44-1575043694:183783..183843 | Clytia hemisphaerica | exon |
| TCONS_00065505-exon-scaffold_44-1510915933:184068..184924 | TCONS_00065505-exon-scaffold_44-1510915933:184068..184924 | Clytia hemisphaerica | exon |
| TCONS_00065505-exon-scaffold_44-1510915933:183783..183843 | TCONS_00065505-exon-scaffold_44-1510915933:183783..183843 | Clytia hemisphaerica | exon |
| TCONS_00065505-exon-scaffold_44-1491911889:184068..184924 | TCONS_00065505-exon-scaffold_44-1491911889:184068..184924 | Clytia hemisphaerica | exon |
| TCONS_00065505-exon-scaffold_44-1491911889:183783..183843 | TCONS_00065505-exon-scaffold_44-1491911889:183783..183843 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_44 | supercontig | scaffold_44:183783..184924 - |
Blast
The following BLAST results are available for this feature:
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