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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065423 ID=TCONS_00065423|Name=TCONS_00065423|organism=Clytia hemisphaerica|type=transcript|length=703bp
tgttaatttcaaggccgttaatactcgcctagtaatattcgtgtaataag
gtattctAGATGAAAGACATGAGGGAGTAGAAGTGCCAAAATGAGACCAC
CATAAAGAGACTATGAAAGAACGAAGAAAAAACGAGAAACGaataaaaac
gacaaaaaagaacgacatattttgcCATCTTCAACTGCGAccaaaagtga
ctgtaccacccctacgtATTTCCCTTAGTTCTTTACGCTATTTAACCACT
AACGGTTTAAAAGAACGCATGCGCAGTTTGTGGGCTCCAATTGGCTCATC
CACTGTGTGACATTTGATATTGCCAGCTTAATTTTCGACAATGTCAACCA
TTTTGATTCATTTATAATTGTCAATTAGGTGAAACGGTCCTCGTCAACCT
CTTTAAaattctttctctttttctcttcAGGTAATAAGACTGGGGATGAG
CCAAAGAAAGAAACGGCTAAGAAGCCAGAAGCTAAGTCCAAAGAAGGTGG
TGGTGGTTTATTTAGTCGTCTCGGTAAAATGTTCACCAGAACCCCGGAGG
TTCATCTACCGGATGATAACGATAAGTCGCTCGTGTACGACGAAAAGTTA
AAACGGTGGATCGATAAAGATGCCGGTCCTGAAGATCTCCCAAAACCGCC
CCCTCCTCCACCCACTGGCTTATTAGGCCCCCAAAAGACGCCATCGGCCG
CCN Run BLAST on NCBI transcript from alignment at scaffold_439:340400..341531- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065423 ID=TCONS_00065423|Name=TCONS_00065423|organism=Clytia hemisphaerica|type=transcript|length=1132bp|location=Sequence derived from alignment at scaffold_439:340400..341531- (Clytia hemisphaerica)
TGTTAATTTCAAGGCCGTTAATACTCGCCTAGTAATATTCGTGTAATAAG
GTATTCTAGATGAAAGACATGAGGGAGTAGAAGTGCCAAAATGAGACCAC
CATAAAGAGACTATGAAAGAACGAAGAAAAAACGAGAAACGAATAAAAAC
GACAAAAAAGAACGACATATTTTGCCATCTTCAACTGCGACCAAAAGTGA
CTGTACCACCCCTACGTATTTCCCTTAGTTCTTTACGCTATTTAACCACT
AACGGTTTAAAAGAACGCATGCGCAGTTTGTGGGCTCCAATTGGCTCATC
CACTGTGTGACATTTGATATTGCCAGCTTAATTTTCGACAATGTCAACCA
TTTTGATTCATTTATAATTGTCAATTAGGTGAAACGGTCCTCGTCAACCT
CTTTAAAATTCTTTCTCTTTTTCTCTTCAGGTAATAAGACTGGGGATGAG
CCAAAGAAAGAAACGGCTAAGAAGCCAGAAGCTAAGTCCAAAGAAGGTGG
TGGTGGTTTATTTAGTCGTCTCGGTAAAATGTTCACCAGAACCCCGGAGG
TTCATCTACCGGATGATAACGATAAGTCGGTAAGATTTTCGAAATTGTAT
TTTTGGGTATCTGGATTTTTTCAAGGCTTCGGAATGAAGATTTTTTATGT
AAATGTTGATTCATCTTTAATATATTTGGCAATTACTGGAAGTAAAATAA
CAAAGAATGATCATGGAAAGAGCATTCTAATGTATCAAGTTCAAATTATT
TAAGATAATATTTCCGTTAGAAATGTGATGATGTAAAAACAATTCTTCGC
CACGGCATGACGTCAGAACTGGGGTACAACAGAATACTTACTAAAGATTA
ATCATGTGTTTTCAGTAAACATAATCTTTTAGTGAGTTAAACCATAGTGT
TCGTTTTACCCTCGAAATTATTAAATCTTATTGGTTGAAAAAGATGTCAA
ATGACTTTCCGTGGCAAAGAATGAGTTGTGAAAAAGATAACATTTTTGTA
TAATTCAGCTCGTGTACGACGAAAAGTTAAAACGGTGGATCGATAAAGAT
GCCGGTCCTGAAGATCTCCCAAAACCGCCCCCTCCTCCACCCACTGGCTT
ATTAGGCCCCCAAAAGACGCCATCGGCCGCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065423-exon-scaffold_439-1575043694:340953..341531 | TCONS_00065423-exon-scaffold_439-1575043694:340953..341531 | Clytia hemisphaerica | exon |
| TCONS_00065423-exon-scaffold_439-1575043694:340400..340523 | TCONS_00065423-exon-scaffold_439-1575043694:340400..340523 | Clytia hemisphaerica | exon |
| TCONS_00065423-exon-scaffold_439-1510915933:340953..341531 | TCONS_00065423-exon-scaffold_439-1510915933:340953..341531 | Clytia hemisphaerica | exon |
| TCONS_00065423-exon-scaffold_439-1510915933:340400..340523 | TCONS_00065423-exon-scaffold_439-1510915933:340400..340523 | Clytia hemisphaerica | exon |
| TCONS_00065423-exon-scaffold_439-1491911889:340953..341531 | TCONS_00065423-exon-scaffold_439-1491911889:340953..341531 | Clytia hemisphaerica | exon |
| TCONS_00065423-exon-scaffold_439-1491911889:340400..340523 | TCONS_00065423-exon-scaffold_439-1491911889:340400..340523 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:340400..341531 - |
Blast
The following BLAST results are available for this feature:
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