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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065289 ID=TCONS_00065289|Name=TCONS_00065289|organism=Clytia hemisphaerica|type=transcript|length=4441bpRun BLAST on NCBI transcript from alignment at scaffold_435:271875..293478- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00065289 ID=TCONS_00065289|Name=TCONS_00065289|organism=Clytia hemisphaerica|type=transcript|length=21604bp|location=Sequence derived from alignment at scaffold_435:271875..293478- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00065289 vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 4.036e-27 Identity = 175/726 (24.10%), Postives = 286/726 (39.39%), Query Frame = 2
Query: 191 EIFSTYVNDSVLLYCNITSYPQLVSSTAGPVRWFKDNVEITSNVIKFNESVIDNTFYYTTTSAIRIDPIEETENSKEYRCEA-SVSGFTSISKTIRVLV---LNGMLTNVPDTPLCGALGDSIFFDWQYTYTQPYDDIVWEKYIDGNETVEFLVGKLQPTAPGLNMKNDTKYTYEASTKSGLYIHHIELSDEGYY-GVKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPR---NTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDGSLVANVT------DG-IYNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQP---------ILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVNQ--DAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLG 2290
E +N+ + LYC + P + W+KD +TS+ D ++I P + E++ Y C A + +G S+ +RVLV + G +++P+ + + S + + P W+K DG +E D + + ++ + L I + +++D G Y V N SA+ + + L V V P + TV I+LTC V+G P PDL W +++ L NT+ + T L I A D G Y+C A N+ E + + VY P + + + +V V ++ L+C+++A P+ YK+G ++ T DG + +I SD+G Y C NV G D+ L V P I++ ++PV +LTC G P P I W K ++ E D I+ S + ++ G Y C A N+ Q+ L + ++ + D N+ C A G P PL IQW + PI+ + VS+ + + + LT D G C+A+N G ++ NV P + N + E++ D + + C AT P W K+G+ + P ++H A Q RI VYTC+ASN G
Sbjct: 2785 EAKDVIINNPISLYCETNAAPPPT------LTWYKDGHPLTSS---------DKVLILPGGRVLQI-PRAKVEDAGRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEE-VTVLVNKSALIEC-LSSGSPAPRNSWQK--DGQPLLE-----------------DDHHKFLSNGRI-LQILNTQITDIGRYVCVAENTAGSAKKYFN---LNVHVPPSVIGPKSENLTVVVNNFISLTCEVSGFPPPDLSW-LKNEQPIKL-NTNTLIVPGGRT------------LQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHDSESLSVVNVREGTSVSLECESNAVPPPVITW-YKNGRMITESTHVEILADGQMLHIKKAEVSDTGQYVCRAINVAGR-DDKNFHLNVYVPPSIEGPEREVIVETISNPV--------TLTCDATGIPPPTIAWLK-------NHKRIENSDSLEVRILSGGSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSIQVPPSVAGAEI--PSDVSVLLGENVELVCNANGIPTPL-IQWLKDGKPIASGETERIRVSANGSTLNIYGALT------SDTGKYTCVATNPAGEEDRIFNLNVYVTPTIRGNKDEAEKLMTLVDTSINIECRATGTPPPQINWLKNGLPL-PLSSHIRLLAAGQ--------VIRIVRAQVSDVAVYTCVASNRAG 3420 HSP 2 Score: 110.538 bits (275), Expect = 6.322e-24 Identity = 133/507 (26.23%), Postives = 193/507 (38.07%), Query Frame = 2
Query: 836 PHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYY------APRNTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDGSLV---------ANVTDGIYNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQV-NQDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNVSFAT 2308
P S+ I N +TV E C G P P + W D N + Y I + L I SA D G Y C A N R RR+D+ AP T + VN T L C+ +P K+G L+ ++ G I S + D+ Y C N G D T+ L V P + + + K + +TCT G P P I WTK G+ + + G + + + T+L H G Y C A N + ++V+L VH I Q + H + I+ C A G P P I W + ++ + V L ++ ++D GT MC+A N GT NV PP ++ P+ E V D + LSC A P TW+KDG I + + ++ + +I V AG YTC+A+N G+ S +T
Sbjct: 3719 PQSLVILLNKSTVLE-------CIAEGVPTPRITW--RKDGAVLAGNHARYSILE------------NGFLHIQSAHVTDTGRYLCMATNAAGTDR--RRIDLQVHVPPSIAPGPTNMTVIVN-----VQTTLACEATGIPKPSINW-RKNGHLLNVDQNQNSYRLLSSGSLVIISPSVDDTATYECTVTNGAG-DDKRTVDLTVQVPPSIADEPTDFLVTKHAPAVITCTASGVPFPSIHWTK--NGI-------RLLPRGDGYRILSSGAIEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQP----QPSELHVILNNPILLPCEATGTPSPF-ITWQKEGINVNTSGRNH--------AVLPSGGLQISRAVREDAGTYMCVAQNPAGTALGKIKLNVQVPPVIS--PHLKEYVIAVDKPITLSCEADGLPPPDITWHKDGRAIVESIRQRVL----------SSGSLQIAFVQPGDAGHYTCMAANVAGSSSTST 4161 HSP 3 Score: 108.227 bits (269), Expect = 2.875e-23 Identity = 136/544 (25.00%), Postives = 219/544 (40.26%), Query Frame = 2
Query: 722 LYIHHIELSDEGYYGVKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPRNTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKD-GSLVANVTDGI-----------YNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPILDN---YTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVR-KCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALE--QVNQDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNVS 2299
L + ++SD G Y + + + E + L V V P+ M NV+ + + + L C P P L W + L I++ N ++ L I A QD G Y+C A N + V+++ P N + + + ++ L+ ++S P LI+K GS V +TD + IS SD+ Y+C NV G L+V +P + N + + + + +S SL C G P P +TW K DG L E +D+ G I+ + G Y C A N+ + L VH +I + + +N + + N V C A G P P +I W+ + P+S ++ + + M T +D G C+ N+ G + + +V+ PP + N LE +V + + L+C T N +P TW+KDG + + H H +IT V H G YTCLAS+ G+ S
Sbjct: 2068 LALTSAQISDTGRYTC-VAVNAAGEKQRDID-LRVYVPPNIMGEEQNVSVLISQA-VELLCQSDAIPPPTLTWLKDGH---PLLKKPGLSISE-------NRSV----LKIEDAQVQDTGRYTCEATNVAGKTEKNYNVNIWVPP-NIGGSDELTQLTVIEGNLISLLCESSGIPPPNLIWKKKGSPV--LTDSMGRVRILSGGRQLQISIAEKSDAALYSCVASNVAGTAKKE-YNLQVYIRPTITNSGSHPTEIIVTRGKSISLECEVQGIPPPTVTWMK-DGHPLIKAKGVEILDE--GHIL------QLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNH--RSPENISVVEKNSVSLTCEASGIPLP-SITWFKDGWPVSLSNSVRILSGGRMLRL-------MQTT-MEDAGQYTCVVRNAAGEERKIFGLSVLVPPHIVGE-NTLEDVKVKEKQSVTLTCEVTGNPVPEITWHKDGQPLQEDEAH---------HIISGGRFLQITNVQVPHTGRYTCLASSPAGHKS 2560 HSP 4 Score: 103.99 bits (258), Expect = 6.148e-22 Identity = 172/760 (22.63%), Postives = 282/760 (37.11%), Query Frame = 2
Query: 89 IGYADNETTNVFLTYQPDISLVALDRDTYELGGVEIFSTYVNDSVLLYCNITSYPQLVSSTAGPVRWFKDNVEIT--SNVIKFNESVIDNTFYYTTTSAIRIDPIEETENSKEYRCEA-SVSGFTSISKTIRVLVLNGML-TNVPDTPLCGALGDSIFFDWQYTYTQPYDDIVWEKYIDGNETVEFLVGKLQPTAPGLNMKNDTKYTYEASTKSGLYIHHIELSDEGYYGVKINFDNSAEVFHHVTYLTVVVNP--HSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPR-----NTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDGSLVANVTDGI--------YNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPILDNYTSPVYGIKPQSS--SLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVG-TIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVNQDAI----LRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLG 2290
I A NE Y + + + +D ++ V + +N L+C + P + + W+KDNV++T S + N I F T E++ Y C+A +++G + I VLV ++ TN P+ + L + + Q T P+ DI W K DG +G P + + + + L++ + +D+G Y + N+A LT+ + P ++T +++ + I L C G P P + WY D ++++ +I L I A D Y+C N VDVY P T LN V H L+ L+C + P+ + KDG V D I I S D G Y C +V G + ++V P ++ Y I ++ L C G+P P I W K DG + ID+ G I+ + ++ + G Y C A N ++ + VH I S L + + +C A G P P +I W + P++ + + TL +D G C+A+N+ G + +V PP L +A + +N+ + ++L C A N +P TWYKD ++ + + T N I AG+Y C+A NS G
Sbjct: 1337 ICVAVNEAGTTERKYNLKVHVPPVIKDKEQVTNVSVL---LNQLTNLFCEVEGTPSPI------IMWYKDNVQVTESSTIQTVNNGKILKLFRAT------------PEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNE-VSVVLNRDVALECQVKGT-PFPDIHWFK--DGK---PLFLGD-----PNVELLDRGQV---------LHLKNARRNDKGRY--QCTVSNAAGKQAKDIKLTIYIPPSIKGGNVTTDISVLINSL-IKLECETRGLPMPAITWY--KDGQPIMSSSQALYIDKGQY------------LHIPRAQVSDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGNLATPLNKQVVIAHSLT---LECKAAGNPSPILTWL-KDGVPV-KANDNIRIEAGGKKLEIMSAQEIDRGQYICVATSVAGEKE-IKYEVDVLVPPAIEGGDETSYFIVMVNNLLELDCHVTGSPPPTIMWLK-DG---------QLIDERDGFKILLNGRKLVIAQAQVSNTGLYRCMAANTAGDHKKEFEVTVHVPPTIKSSGLSERV---VVKYKPVALQCIANGIPNP-SITWLKDDQPVNTAQGN------LKIQSSGRVLQIAKTL-LEDAGRYTCVATNAAGETQQHIQLHVHEPPSLE---DAGKMLNETVLVSNPVQLECKAAGNPVPVITWYKDNRLLSGSTSMTFLN---------RGQIIDIESAQISDAGIYKCVAINSAG 1998 HSP 5 Score: 103.605 bits (257), Expect = 6.801e-22 Identity = 126/532 (23.68%), Postives = 208/532 (39.10%), Query Frame = 2
Query: 728 IHHIELSDEGYYG-VKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVY-YAPRNTTLNATVNPVHLLSTTLLQCDTDASTEPMY------YLIYKDGSLVANVTDGIYNISSVAYSDSGNYTCHPYNVMGFGD-NATLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVN--QDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLG 2290
I ++SD G Y V IN + E+F+ L V V P S+S + N+ V + L C G PAP L W + ++ +N S + L +TSA D G Y+C A N EK+ R +D+ Y P N V + L C +DA P + + K L + + I D+G YTC NV G + N + + V + + + I+ SL C G P P + W K VL D++ I+ + + E Y C A N+ ++ +L V+ IT ++ + T +I +C G P P T+ W + P+ + + ++ L + + D G +C+A N G ++ +V PP + N + E ++ + + L+C A+ LP+ TW+KDG ++ + + I + R+ + AG YTC+ N+ G
Sbjct: 1978 IESAQISDAGIYKCVAINSAGATELFYS---LQVHVAP-SISGSNNMVAVVVNNPVRLECEARGIPAPSLTWLKDGSPVSSFSNGLQVL----SGGRI---------LALTSAQISDTGRYTCVAVNAAGEKQ--RDIDLRVYVPPNIMGEEQNVSVLISQAVELLCQSDAIPPPTLTWLKDGHPLLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAGKTEKNYNVNIWVPPNIGGSDELTQLTVIEGNLISLLCESSGIPPPNLIWKKKGSPVLTDSMGRV-------RILSGGRQLQISIAEKSDAALYSCVASNVAGTAKKEYNLQVYIRPTIT-NSGSHPTEIIVTRGKSISLECEVQGIPPP-TVTWMKDGHPLIKAKGVE--------ILDEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNHRSPENISVVEKNSVSLTCEASGIPLPSITWFKDGWPVSLSNSVRILSGGRM---------LRLMQTTMEDAGQYTCVVRNAAG 2464 HSP 6 Score: 101.679 bits (252), Expect = 2.591e-21 Identity = 152/596 (25.50%), Postives = 219/596 (36.74%), Query Frame = 2
Query: 614 GNETVEFLVGKLQP-----TAPGLNM------KNDTKYT-----YEASTKSGLYIHHIELSDEGYYGVKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPRNTTLNATVNPV---HLLSTTL-------LQCDTDASTEPMYYLIYKDGSLVAN------VTDGIYNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPILDNYTSPVYGIKPQSSS-LTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTAN--PNALEQVNQDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNV 2296
+E +FLV K P TA G+ KN + Y + + I +L+ G Y + + + HVT V P + P+ V I L C TG P+P + W E + +T + + + L I+ A +D G Y C A+N A LN V PV HL + L C+ D P +KDG + ++ G I+ V D+G+YTC NV G +T L V P + + T Y + S + L C G P P I W K + VL N+ + + G ++ + LE G Y C A+N VSL VH T D + C A G P P + W N+ I H S V S L + + K+D GT +C A NS+G + V PP + N +E + +AI L+C + PT W + GV+I +H I N + I G + AG YTC+A+N G V
Sbjct: 3900 ADEPTDFLVTKHAPAVITCTASGVPFPSIHWTKNGIRLLPRGDGYRILSSGAIEILATQLNHAGRYTC-VARNAAGSAHRHVTLH--VHEPPVIQPQPSELHVILNNPILLPCEATGTPSPFITWQKEG--------------INVNTSGRNHAVLPSGGLQISRAVREDAGTYMCVAQNP-----------AGTALGKIKLNVQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPDITW-HKDGRAIVESIRQRVLSSGSLQIAFVQPGDAGHYTCMAANVAGSSSTST-KLTVHVPPRIRS-TEGHYTVNENSQAILPCVADGIPTPAINWKKDN--VLLANLLGKYTAEPYGELILENVV-------LEDSGFYTCVANNAAGEDTHTVSLTVHVLPTFTE----LPGDVSLNKGEQLRLSCKATGIPLP-KLTWTFNNNIIPAHFDS----------VNGHSELVIERVSKEDSGTYVCTAENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGNAI--LNCEVKGDPTPTIQWNRKGVDI--EISHRIRQLGN--------GSLAIYGTVNEDAGDYTCVATNEAGVV 4428 HSP 7 Score: 93.5893 bits (231), Expect = 8.378e-19 Identity = 136/545 (24.95%), Postives = 198/545 (36.33%), Query Frame = 2
Query: 722 LYIHHIELSDEGYY-GVKIN-FDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAP------RNTTLNATVNPVHLLSTTLLQCDTDASTEPM------YYLIYKDGSLVANVTDG--IYNISSVAYSDSGNYTCHPYNVMGFGDNA-TLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVN--QDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNVS 2299
L I ++SD G Y + IN S + F Y+ + H S + +V V E +++L C P P + WY T T+ + D L I A D G Y C A N ++VY P R + NPV L CD P + I SL + G I+ +SDSGNYTC N+ G L+++V S V + ++ L C G P P I W K DG + TE I + ST+ G Y C A N + +L V+ I + E T DT+I +C A G P P I W N LP+ S + + + D+ C+ASN G DN+ V PP + N E++ + + ++C+ P+ W +DG + +A T+ S H ++ T+ +G YTC+ASN G VS
Sbjct: 3020 LQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHD-SESLSVVNVREGTSVSLECESNAVPPPVITWYKNGRMITESTHVE--ILADGQM------------LHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPV------TLTCDATGIPPPTIAWLKNHKRIENSDSLEVRILSGGSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSIQVPPSVAGAEIPSDVSVLLGENVELVCNANGIPTPLIQWLK-DGKPIASG-ETERI-----RVSANGSTLNIYGALTSDTGKYTCVATNPAGEEDRIFNLNVYVTPTIRGNKDEAE-KLMTLVDTSINIECRATGTPPP-QINWLKNGLPLPLSSHIRLLAAGQVIRIVRAQV--------SDVAVYTCVASNRAGVDNKHYNLQVFAPPNMD-NSMGTEEITVLKGSSTSMACITDGTPAPSMAWLRDGQPLGLDAHLTV--------STHGMV-LQLLKAETEDSGKYTCIASNEAGEVS 3516 HSP 8 Score: 88.5817 bits (218), Expect = 2.442e-17 Identity = 125/557 (22.44%), Postives = 197/557 (35.37%), Query Frame = 2
Query: 692 YTYEASTKSGLYIHHIELSDEGYYGVKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPRNTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDG----------SLVANVTDGIYNISSVAYSDSGNYTCHPYNVMG-FGDNATLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFY-GNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVNQDAI-------LRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNVSFA 2305
+ Y ++ L+I + D G YG + NSA + L + P M + + + + + C +G P P + W+ D S + I D + L I D G+Y+C A N+ +DV P A V+ + + S L C EP D S ++ + G I ++ SD G Y C N G T+ + P++ S I+ Q +L CT GNP PE W K +L + T V ++ +L+ G Y C A N+ + S++VH I I T + C A G P P I W IS SA + +L + + ++ G +C A+N+ G V P + + L Q I + L C S P TW K+ I+P + H++ + + +IT T +G+Y C+A+N GNV+ A
Sbjct: 656 HRYRMTSDGTLFIKNAAPKDAGIYGCLAS--NSAGTDKQNSTLRYIEAPKLMVVQSELLVALGDITV-MECKTSGIPPPQVKWFKGD----LELRPSTFLIID----------PLLGLLKIQETQDLDAGDYTCVAINEAGRATGKITLDVGSPPVFIQEPADVS-MEIGSNVTLPCYVQGYPEPTIKWRRLDNMPIFSRPFSVSSISQLRTGALFILNLWASDKGTYICEAENQFGKIQSETTVTVTGLVAPLIGISPSVANVIEGQQLTLPCTLLAGNPIPERRWIKNSAMLLQNPYIT----------VRSDGSLHIERVQLQDGGEYTCVASNVAGTNNKTTSVVVHVLPTIQHGQQILS----TIEGIPVTLPCKASGNPKPSVI-WSKKGELISTSSAK--------FSAGADGSLYVVSPGGEESGEYVCTATNTAGYAKRKVQLTVYVRPRVFGDQRGLSQDKPVEISVLAGEEVTLPCEVKSLPPPIITWAKETQLISPFSPR---------HTFLPSGSMKITETRTSDSGMYLCVATNIAGNVTQA 1162 HSP 9 Score: 87.0409 bits (214), Expect = 7.992e-17 Identity = 134/558 (24.01%), Postives = 204/558 (36.56%), Query Frame = 2
Query: 665 GLNMKNDTKYTYEASTKSGLYIHHIELSDEGYYGVKINFDNSAEVFHHVTYLTVVVNPHSMSITPNVA--TVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPR--NTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDGSLVANVTD-------GIYNISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPIS-RHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQV-NQDAILRLSCVATSNELPTFTWYKDGVEIT-PNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNV 2296
G+N+ N + + GL I D G Y N A L V V P I+P++ + ++ ITL+C G P PD+ W+ + +++ + + L I D G+Y+C A N ++ V+ PR +T + TVN S +L C D P KD L+AN+ G + +V DSG YTC N G D T++L V P V K + L+C G P P++TWT +NI D G S + E GTY C+A+N V+ + + + + G N + C G P P TIQW + I H Q S V +D G C+A+N G + + PP +T P +E V N + L+C AT PT TW + G I+ + + ++N ++ I + + C+A N +G+V
Sbjct: 4025 GINV-NTSGRNHAVLPSGGLQISRAVREDAGTY--MCVAQNPAGTALGKIKLNVQVPP---VISPHLKEYVIAVDKPITLSCEADGLPPPDITWHKDGRAIV---------------ESIRQRVLSSGSLQIAFVQPGDAGHYTCMAANVAGSSSTSTKLTVHVPPRIRSTEGHYTVNEN---SQAILPCVADGIPTPAINW-KKDNVLLANLLGKYTAEPYGELILENVVLEDSGFYTCVANNAAGE-DTHTVSLTVHVLPTFTELPGDVSLNKGEQLRLSCKATGIPLPKLTWT------FNNNIIPAHFDSVNG-----HSELVIERVSKEDSGTYVCTAENSVGFVKA-IGFVYVKEPPVFKGDYPSNWIEPLGG--NAILNCEVKGDPTP-TIQWNRKGVDIEISHRIRQLGNGSLAIYGTV----------NEDAGDYTCVATNEAGVVERSMSLTLQSPPIITLEP--VETVINAGGKIILNCQATGEPQPTITWSRQGHSISWDDRVNVLSN-----------NSLYIADAQKEDTSEFECVARNLMGSV 4518 HSP 10 Score: 85.8853 bits (211), Expect = 1.606e-16 Identity = 180/781 (23.05%), Postives = 276/781 (35.34%), Query Frame = 2
Query: 53 HSGVIGCYATNGIGYADNE-TTNVFLTYQPDISLVALDRDTYELGGVEIFSTYVNDSVLLYCNITSYPQLVSSTAGPVRWFKDNVEITSNVIKFNESVIDNTFYYTTTSAIRIDPIEETENSKEYRCEASVSGFTSISKTIRVLVLNGMLTNVPDTPLCGALGDSIFFDWQYT-------YTQPYDDIVWEKYIDGNETVEFLVGKLQPTAPGLNMKNDTKYTYEASTKSGLYIHHIELSDEGYYGV---------KINFDNSAEVFHHVTYLTVVVNPHSMSITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAP----RNTTLNATVNPVHLLSTTLLQCDTDASTEPMYYLIYKDGSLVAN------VTDG-IYNISSVAYSDSGNYTCHPYNVMG-----FGDNATLALEVTAQPILDNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTGDTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPELTANPNALEQVNQDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNV 2296
H+G C A++ G+ + NVF++ P I+ V D G E + +N L C SYP + WFKD + SN N ++I +E +N+ Y C A+ I K V V + N D G + T Y P + W Y DG QP +K+D A+ + L I ++SD G Y +++FD + +V L + N V I+L C P P L WY + LT++ I G L I A +D G Y+C A N+ E + V V P N+ L V V + + L++C + S P KDG + +++G I I + +D G Y C N G F N + V P +N T V SLTC G P P+++W K + + + T T+ IV T+ ++ G Y C A N ++ SL V+ +I H + T++ +C + P P+ I WY N I+ + + + L + + D G +C A N G D++ + NV PP + + + L+C AT PT W K+ I + + + S +I +G YTC+ASN G
Sbjct: 2544 HTGRYTCLASSPAGHKSRSFSLNVFVS--PTIAGVGSD------GNPEDVTVILNSPTSLVCEAYSYPPAT------ITWFKDGTPLESN---------RNIRILPGGRTLQILNAQE-DNAGRYSCVATNEAGEMI-KHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNNTLTLECEAYAIPSASLSW--YKDG-----------QP------LKSDDHVNIAANGHT-LQIKEAQISDTGRYTCVASNIAGEDELDFDVNIQVPPSFQKLWEIGNMLDTGRNGEAKDVIINNPISLYCETNAAPPPTLTWYKDGH---PLTSSDKVLILP------GGRV-----LQIPRAKVEDAGRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEEVT-VLVNKSALIECLSSGSPAPRNSW-QKDGQPLLEDDHHKFLSNGRILQILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSVIG-PKSENLTVVVNNF----ISLTCEVSGFPPPDLSWLKNEQPI---KLNTNTL------IVPGGRTLQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHDSESLSVVNVREGTSVSLECESNAVPPPV-ITWYKNGRMITESTHVE--------ILADGQMLHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPVTLTCDATGIPPPTIAWLKNHKRIENSDSLEV-------RILSGGSKLQIARSQHSDSGNYTCIASNMEGKA 3233 HSP 11 Score: 85.8853 bits (211), Expect = 1.762e-16 Identity = 129/564 (22.87%), Postives = 203/564 (35.99%), Query Frame = 2
Query: 722 LYIHHIELSDEGYY-GVKINFDNSAEVFHHVTYLTVVVNPHSMS--ITPNVATVYEEENITLTCTVTGKPAPDLFWYFEDDWTTALTNTSDYFITDWSTDTVGNETIVTSDLTITSASHQDVGNYSCGAKNKLTEKRIYRRVDVYYAPRNTTLNATVN-PVHLLSTTLLQCDTDASTEPMYYLIYKDGSLVAN------VTDGIY-NISSVAYSDSGNYTCHPYNVMGFGDNATLALEVTAQPIL-----DNYTSPVYGIKPQSSSLTCTFYGNPAPEITWTKLDGGVLYDNITTETIDKCVGTIVFKTSTVTFNPTELEHYGTYECSADNIYDAVQQNVSLIVHYAVNITSHTLIQEYDNHTTG----------DTNIVRKCTAVGYPGPLTIQWYLNSLPISRHSASQXXXXXXXXXXXXXXXXXMNTLDKDDLGTLMCLASNSIGTDNETTYFNVMYPPEL-----------TANPNALEQVNQDAILRLSCVATSNELPTFTWYKDGVEITPNATHTITNAENQPHSYHTTSNFRITGVATDHAGVYTCLASNSLGNVSF 2302
L + +I +SD G Y V +N + + L+V P + +P +V E+ +++LTC +G P P + W F+D W +L+N+ G L + + +D G Y+C +N E+R + V P N + V + L C+ + P +KDG + ++ G + I++V +G YTC + G + + +L V P + D V I +SL C Y P ITW K DG L N I+ T+ + ++ G Y C A N + +I HY V + +I + D G + + +C A P ++ WY + P+ TL + D G C+ASN G D N+ PP T + V + + L C + PT TWYKDG +T + I +I + AG YTC+A N G S
Sbjct: 2348 LQLKNIHVSDTGRYVCVAVNVAGMTDKKYD---LSVHAPPSIIGNHRSPENISVVEKNSVSLTCEASGIPLPSITW-FKDGWPVSLSNSVRIL--------SGGRM-----LRLMQTTMEDAGQYTCVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQSVTLTCEVTGNPVPEITW-HKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTCLASSPAGH-KSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTSLVCEAYSYPPATITWFK-DGTPLESNRNIR--------ILPGGRTLQILNAQEDNAGRYSCVATN------EAGEMIKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNNTLTLECEAYAIPS-ASLSWYKDGQPLKSDD--------HVNIAANGHTLQIKEAQISDTGRYTCVASNIAGEDELDFDVNIQVPPSFQKLWEIGNMLDTGRNGEAKDVIINNPISLYCETNAAPPPTLTWYKDGHPLTSSDKVLILPGGRV---------LQIPRAKVEDAGRYTCVAVNEAGEDSL 2859 The following BLAST results are available for this feature:
BLAST of TCONS_00065289 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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