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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065220 ID=TCONS_00065220|Name=TCONS_00065220|organism=Clytia hemisphaerica|type=transcript|length=876bp
GAAGCATATAAGATAGAGGAAGACCTACTGAAAAGGGGAAATTAGGGGaa
caattctatcaaaagttattggcaaAGAAAGTCACCTTTTGAGGTCAAAA
TTATGGTTTTTCTTGCATAACCTTTAATTGCAGTACCCCCTTCTTATTCC
GGTTTGACAACAGGTAGTCAAGTACATCAGAAACATACGGGAATGTTTAC
ACATGGACAGGATAAGTTTCCACGAAGCCCCAGCAAGGACAaaagttgga
tttggctgaaaatgactgaaattgtgatctttgatatattttttggGTAA
AAGCTATGGTAATTCTGTTTGGCTATATGAAAAGCTTATTTATTCCTTGT
CAAGATACTTTTTATTTGAGATTGATTGCTTTAccaaacaaaaagatatt
aaaatGTCTTGACAGgccattttgtcatttttgtgtcattttggTCAGCT
GAACGGATTGACgcatttctattgttttgtCTTTTGTGACACGTGTGTCG
GAAATCTTGTGTTgtcccccctgttacagacaaattctggaatggcccaa
tagaCAAGAAAATCAAAGATAAATGAAACATGAtgtaaaaattgaaagaa
taaCAAAAAGTGATGACTGAAGAAATAAAGGAAGGATTTTTGTGTCCGAT
ATGCTTGAAAGATTTGCAATCACCCACCAACTTATCAAAACACTTTGAAG
AATTTCATCAAGAAGATGGAGCAGTGTTGCAACAGTTACGAAGTGTATTT
GGTAAACAACCAGCTGGGAAATCTGGACCAAACCAACCAGCAAAGAATGA
TGTTGTTGTTTCGAATGGTACACCAGCCACTGGTGGCATTGATGTTGAAT
TGTGGGAAACACAGATAACTGGTAAT Run BLAST on NCBI transcript from alignment at scaffold_433:469855..471137- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065220 ID=TCONS_00065220|Name=TCONS_00065220|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at scaffold_433:469855..471137- (Clytia hemisphaerica)
GAAGCATATAAGATAGAGGAAGACCTACTGAAAAGGGGAAATTAGGGGAA
CAATTCTATCAAAAGTTATTGGCAAAGAAAGTCACCTTTTGAGGTCAAAA
TTATGGTTTTTCTTGCATAACCTTTAATTGCAGTACCCCCTTCTTATTCC
GGTTTGACAACAGGTAGTCAAGTACATCAGAAACATACGGGAATGTTTAC
ACATGGACAGGATAAGTTTCCACGAAGCCCCAGCAAGGACAAAAGTTGGA
TTTGGCTGAAAATGACTGAAATTGTGATCTTTGATATATTTTTTGGGTAA
AAGCTATGGTAATTCTGTTTGGCTATATGAAAAGCTTATTTATTCCTTGT
CAAGATACTTTTTATTTGAGATTGATTGCTTTACCAAACAAAAAGATATT
AAAATGTCTTGACAGGCCATTTTGTCATTTTTGTGTCATTTTGGTCAGCT
GAACGGATTGACGCATTTCTATTGTTTTGTCTTTTGTGACACGTGTGTCG
GAAATCTTGTGTTGTCCCCCCTGTTACAGACAAATTCTGGAATGGCCCAA
TAGACAAGGTATATTGGCATTACACAAAGTTATGGTAGGGAAGACTATCT
AAATCTACAAATTNNTTTTAGATACAAATTTGTGATTTTTTACCATTCTT
GTATACTGATGATGGCGTAAGCCGAAAAGCTTCTATTTTTATGTAGTGAA
ATAAATTTTGATTTTTTACAAATTCATTGTTCACTGAGAAAAATTTTCAG
TTAATCCTTCTTTTTTAATGAACAATTTAGGTGCTACTCATCAAAAAGAT
TCCTGCATAAAAATTGAAACTTAAATCTATGCATAGCTATTATCATGGAA
AGTATTTGGAAAATTCAAGTCAAAGTTGTCAACAGTGATTCTATCCCAAG
ATATGGTCATCCAAAGTTCCAATTTTTTTTTTGGCTTAAAAAAATAAATT
TCAAATATTTTCCAGAAAATCAAAGATAAATGAAACATGATGTAAAAATT
GAAAGAATAACAAAAAGTGATGACTGAAGAAATAAAGGAAGGATTTTTGT
GTCCGATATGCTTGAAAGATTTGCAATCACCCACCAACTTATCAAAACAC
TTTGAAGAATTTCATCAAGAAGATGGAGCAGTGTTGCAACAGTTACGAAG
TGTATTTGGTAAACAACCAGCTGGGAAATCTGGACCAAACCAACCAGCAA
AGAATGATGTTGTTGTTTCGAATGGTACACCAGCCACTGGTGGCATTGAT
GTTGAATTGTGGGAAACACAGATAACTGGTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065220-exon-scaffold_433-1575043694:470580..471137 | TCONS_00065220-exon-scaffold_433-1575043694:470580..471137 | Clytia hemisphaerica | exon |
| TCONS_00065220-exon-scaffold_433-1575043694:469855..470172 | TCONS_00065220-exon-scaffold_433-1575043694:469855..470172 | Clytia hemisphaerica | exon |
| TCONS_00065220-exon-scaffold_433-1510915933:470580..471137 | TCONS_00065220-exon-scaffold_433-1510915933:470580..471137 | Clytia hemisphaerica | exon |
| TCONS_00065220-exon-scaffold_433-1510915933:469855..470172 | TCONS_00065220-exon-scaffold_433-1510915933:469855..470172 | Clytia hemisphaerica | exon |
| TCONS_00065220-exon-scaffold_433-1491911889:470580..471137 | TCONS_00065220-exon-scaffold_433-1491911889:470580..471137 | Clytia hemisphaerica | exon |
| TCONS_00065220-exon-scaffold_433-1491911889:469855..470172 | TCONS_00065220-exon-scaffold_433-1491911889:469855..470172 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_433 | supercontig | scaffold_433:469855..471137 - |
Blast
The following BLAST results are available for this feature:
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