TCONS_00065176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065176
Unique NameTCONS_00065176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length669

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065176 ID=TCONS_00065176|Name=TCONS_00065176|organism=Clytia hemisphaerica|type=transcript|length=669bp
ATCAGACGAAAAACATGGTGAACACGAAACGGTTTGCGAGGAAAATCGTC
TTCAATCTCAATACATTTTCTCGAAGTTTTTCCTCTGTAATCGACGATAC
GAAAAGTCTACCATTCCCCGAGAAGATTGGTTCTCGCTGGGAGCTTGAAT
CCTCTTTCTTTTTGACAATCGTAGGCTATTGGGGTCAAAGTATTATACGC
TTTGGCAATAGTTTAAAGATACACAACCAAGAGCGCTTGTTGAAATATCT
AGAAAAAGGTGGGCGACCTGAAGGATGTTCATTGTTGACTGTTTGCAACC
ATGCGTCGATGTTAGACGACCCTGCATTAATGTCATCTCTTGTAAGAGGT
AAAGACTTGCGAACATCAAGAACTATGAGATGGTAATTATGGTTCTTGGT
GCGAAGGAGATCATGTTCACAAACCCATTTTTCACATTCGTATGCAGTAG
AGGGAAAgTGATCCCAACTGTTAGAGGTAGGTAAATTGGCATTTATCCCT
CTTTGCATGGCCCACCATCAGGACTGGTGGTGACTGCTAatacaaacttt
ttcaaaagaactcATAACCCTTTCTTGATACATTATTTTGTCCGACAGAT
TAAAGCTTAGTCTAGCATGTTAGACGACTAAAGTATAAAAGAGAGTAGGT
TAAAATAAACAGACTACAG
Run BLAST on NCBI

transcript from alignment at scaffold_433:257505..276641+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065176 ID=TCONS_00065176|Name=TCONS_00065176|organism=Clytia hemisphaerica|type=transcript|length=19137bp|location=Sequence derived from alignment at scaffold_433:257505..276641+ (Clytia hemisphaerica)
ATCAGACGAAAAACATGGTGAACACGAAACGGTTTGCGAGGAAAATCGTC
TTCAATCTCAATACATTTTCTCGAAGTTTTTCCTCTGTAATCGACGATAC
GAAAAGTCTACCATTCCCCGAGAAGATTGGTTCTCGCTGGGAGCTTGAAT
CCTCTTTCTTTTTGACAATCGTAGGCTATTGGGGTCAAAGTATTATACGT
AAGTAATCGATATACTGtatcaatgtttagaaaaaggggttacgcgcgct
ccagaacgcttaaaagtaccgtaagttggtctaatgtcgacatccgtctt
ctaatttcgacacccttctttagagataggaatacaatagaaactgagga
aggtcggaatcactgattgactttgcttagcgcgatgagaggaaaaatct
ttagtctatcagtgatttcgaccttcttattattcctatctataaagaac
gatgtcgaaattagaagacggatgtcgacattagaccaacttacggtacg
ttcctccactctgtttgcattGCAAATAATACTGAGGTAATCCAGGATAA
TCACTACGATTGGCAAAAAATttaaggctagtgaaaatacgttcttttat
tggttgaaactcactagcatGTTTACATTTTTCGGCCGTTTTCATCGTGA
TTGATTATGCCGATTTGCTAGTTAACCTCACAAATATTTAGAGTGTAGAG
TCTTGAGAAGCACTAGTGAAAGGTGAAAACAACAGCTTTTTAATTGGATA
TTCTTTTTGCGGGAAATCTGTTAGGCAAAACTAGAGTGCCTTTTCTGGGT
AaatatgtcgggggaaagtgacgaaatttatAAGAATTTAGGGGCGACAT
CCATATTCAACCCTgccacgcgtaacgggaaaagaccgaTAGTTTTCAAA
CATACCTACACACCCTCTTAACGGTCTTTGCAAAAAAGACCAAAATCCAA
CACTTTACCCACCACTGTAAACatgttttattcttttttctcaactCTCA
TAAATTTATTCACAACTTGGCCATCCACTATGCTGAAAACTGAGTGCGAT
TGGAAATGCGAGTGCGAGTGAAAATCGGGAAAGAAAAACCAAATAGAGAC
AAGTCTTGATTACTCAAATAGAAGGCTAAAAGAATTGGCGGACGGTATTT
TGATTGGCCCTTTCAAAGATAGATTACGTCactttggtaaaaaaaatttc
ctacgCGCGcgggaaaaagaaaacaaatttcaGATAAAGTTACCACGGGG
GAGGGCACAAAAGCCTATACTTCGAAAACACCGCGACTGTATTCGAAGAA
ATTGATTGACGGtagtttgaatttgaatgaaaagcGCATTCGTGGAAGTA
GAAACAAAGGCAACTACTAGAAATATTCAGCTTTTGTAAGAATCTATTAT
TGGCTTTTCTTGGATATTGAGTAGAACATTTTATTTTGGTCATGATTGCC
ACAGTTAACTCCCACAAGTGGGATATACCTACccactaacggtcttttcc
cgttacgcgtggcAGGGTTAaatatggacgtcgccccttAAGGCGACGAC
ATTTTTCCCAGTTGAAGACTATTTTTTTCCTGGTTTTTATCCCCGGCAGA
AAATTTTACCACAGCCTCAGGATCTATAAACTCCAAAGTATCTGAAAAAC
ACATTGGCCAAAGGGAAtggaaaaagaaattccaaaatactgaaattcta
aaaatgtgaagaaaaaaaacgaaaatcgaGTATATTGCACAGGCCCAGGG
GGCGGGGGCGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGTGCGAgggtaagggtaccttttttcacc
ttcacgagtcccaggtaaatggaactttttttcaaaagagagTCCTACGA
ACGGGAGAGCGGAGCACCCCTTttaccaacctcgttccctgcatattatc
agcttttttatgctttactGATTGATAGCGCCCTTTTACTTCCGCCTTTC
TGtgtatagtttcgaatgtttttatttgaaaatctaattcgaacgttata
GATTCGAACGAAAATATTTGATTACTGTTTGATAGAGAAGCATTTTTCGA
TCCCAGAGGTTCTGTTTCGCAGTTAGGGGTGTTGCAGATGTCttagagat
gtatttgaaagtttctagattgataattgaaaatgcagatgatgtacaGT
ATTATTTCGATGGAGAAGAAACCACccttcatcattggattaatcagatt
gaaagCACtgagtctttttctatgtttttgtttcgatatgcatggaaaag
aaaagcagaGGAAAGATGCTTAAAAAGTCAAGGACGTACCTTTGTCGCAA
ACGAGAGAAttgggagagaacttttataaatatCGCTCGTTATATGGTTT
TTAAATACAAGACATTAGATTCAGTTACATTTCCCTTATTATGTTATCAG
AAATCTTGcatattggcaaacattcaagaatctcaaattTTTTGTATGCA
GTAATGAAAAACTGTTTGGCTTCACACGAAcaataccaaaagctgaaaat
atttggatcatgtcaagtagttttataaatttttagttcatcagatttga
ttttagtgtattttatggAAGGAActccaaattaaaagttcatctgaaaa
tatttttgttgttgcATTTCCCCCCTTTCCCTTTGTCTTTGACACTCCCT
ACTCCGAAAGTCATCTTTTCGactgtttttgatttgatttttctcagACA
GGCCTGTCTGTTGTTGTTGAGTACTGTAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaagattttaactt
gaatatgaaactctttaccttgaaattttgtcttCACAATTAAACCACAG
TAATGTCTATGGTTAAaaccaagaaccaacaaacaaacTATATCTTACTC
TTATTAGGTTCTTAGTAGGGGGAGGGCTAATTGTCGGAGGGGTTTGAAAA
TTAATtctaaaaacccaaaaataagctaaaatcaggctttatagagcaaa
ataaggagccTTCCTTCCCTCTgtcagttgaaaatatttttacaaattta
aaTAAACGatggggggtcctaataaggtccgggggttggaaGATTTTCGT
TTTGGAGCAATCtcattatttaaaatataaagcactGAGGATCCTTCACT
TGCGATTGGAGTgatctgaggatttaaaaattgatacgaaaattgatgtc
atgtagtcatacacgaatctatctatctatctatatatttaagtaacATT
AGGCCCGTAGGCCCATTTTTGCTACATATAAAATACAAGATtgtttaata
aaataattttattcataaatatcaataaatattaaaatcattctaaaagT
CAAGGGCTAACAAGAAAAGGGGGGTGATAAGTGTGTCCAAGCTTGGAAAG
TGTAAGACTTAAGACTAAGAGATTAAAGTTATGAGATTATTTATGAGTTT
GGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGTTTGCAGTTTATCAAGAT
CTTCTTGGAGATGGTACATATCTGAAATTGATTTAATACATCTATACAAG
TATGCGTCATCTGCAAATAATCTCAGTAGCGACTGTAGGAGTGCTGGCAT
GTCTTTTACATAAATTAGAAAAAGAAGGGGCCCCAGAACAGTTCCCTGGG
GTACGCCAGACAGAACATCAGCTGGTTGAGAAAATGATCCGTTTNaacaa
ttttgttttaaatgaatcTTCAGATGTTATAGTTCGAATTTGTTTTGGTA
ATTTATTCCAATATTTGGTCACAGTGGGAACAAATGAGTTTGAATAAGCA
AGAATTCTCCCtaatttttgttggaaattgtTTCCATCTCTTGAATGCTT
TGGCAAAATTGTCATAGGAAttgcaatgtttttgttgataattttgtgaA
GCATCATAATGCTGGCAATTTTGCGATGTTGTTCAGTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCACTATTCACAAAACGAGCTGCTTTTCTTTGGACTG
ATTCAAGCTCCTCTCGCAGACCAGAGTTGGATGGACCTGTAGGATTCCAT
ACACTAGATGCGTACGTTATCATTGGCAGAACATACGTCTTGTAAGCTtg
aatttttgctttctttgaaCAACGACGAAGTGTTCGCTGTAAGAAACATC
TCTTCTTGTGAGCTTTGGTACATATTGATGAAANAGGTGATCGGTAGGCA
CTGCAAATTATTACAGGTTTTCTAAAAGTCTCAACTTTGATTGCTATACA
TTCTGTCTTTGTTGATTTGAAAATAGTGTCTGTTATGAGAGATTTCTTTG
CAAAGATAGCAACACCACCCCATCCATCCTTTCGATCATTTCGGTAGGAT
ACATATCCTGGAAGTTCCAGTTCGGAATTTTTAATTGATGGGTCTAAGAA
AGTCTCTGATCCAATCACAATGTCAGGGTTTTCATCTAGCAGAGTGGTGc
caaaatgttcttttttacCCCATAAGCCTTGGAAATTCACCACCATCAGG
CGCAGCATTTTTGCCTTAGCCTTGGGAGTATCATCAGTATTGGAGGTTTC
ACTGGATGTGGATATTATACTGTTTGTAAATAGGTTGTTGTGGCAAATCA
TTGCACATTCAAAACAGGTCCATTGAAGGTTAATATCTATCGTGTGTAAT
TGGAAGATGTTGTCTGACATANTAGTTTTCTCAGAAGGTTCAGTACTCCG
TTTTCCTGTATGTCGATTGTATCAATAGTTTCGGTTGACTCTGGTGAGTT
TATTGGTGGAGTATTTTGGTTAGATGTAGAGAATACACTGCAGTATTGTT
AGTTCAAAATGTCAGCTTTCTCTTGGTCATTTACCACAAAGTTATCACCT
TTCTTGAGAGGAGCAACAGAGATATTATCAGAGCTCTTACTTTTGATGTA
TTTGTAGAGCTTCTTGGAGTTGGATGAGCCAATAATTTTATCTCTAACGT
AGTTGTCGTGGGCTGATCGACATGCTTGTTTGCATTCTTTTATAATTGCT
TTGTATCTATTCCAGTCAGTATACAGTCTTGTTCGTTTAGCTCGTTTGTA
GAGACGTTTCTTACGTCTTGATAATCGTTTGCACTCTGTGGTTATCCAAG
GTTGATTGTAACGTTGGGAAAGCTGTTTGGTTGGGATCTTATCAAGAGCt
gtattgaaaattgtttttaactGTGTCCATTGATCGTTGATGGAAGACAC
ATTATCAAGGTTCGAATCACAAAATTGTTTAACATCTTCAGTCAGGGTTG
CTTTTATATCTGGTAGGTTGGCTCTTTTCCAAAGGTGAATTGTCCGTCTT
GATGTTTTTAGTCGAGAAGGATGGCACAATGTGTCTGCAAGAGGGATGCT
TGTATGATCGCTTATGCCTGGGGTATCAATAATGTGTGTTAAGAGTGAGT
TATTGTTTGTCAATAAAATATCTAAGCAATTGTCTCCTCTTGTTGGAAAG
TTCACTAGCTGTGATAAGCCACTTTCTGTGATCCAGTCTAGAGCtatttc
ataaatttctttaGAGTATTGATATCCAGTTATAGTGTGTGTCTCCCAGT
CAATGTCCGGAAAGTTGAAATCACCTCCAATCCAGATAGTTTtggtttta
ttattgtttttgatGGATTTCAAGTCATTGACTAAGTTTTTTAAGTATGT
GCTGTCGCTTTCAGGTGATCGGTAGGCACTGCAAATTATTACAGGTTTTC
TAAAAGTCTCAACTTTGATTGCTATACATTCTGTCTTTGTTGATTTGAAA
ATAGTGTCTGTTATGAGAGATTTCTTTGCAAAGATAGCAACACCACCCCA
TCCATCCTTTCGATCATTTCGGTAGGATACATATCCTGGAAGTTCCAGTT
CGGAATTTTTAATTGATGGGTCTAAGAAAGTCTCTGATCCAATCACAATG
TCAGGGTTTTCATCTAGCAGAGTGGTGccaaaatgttcttttttacCCCA
TAAGCCTTGGAAATTCACCACCATCAGGCGCAGCATTTTTGCCTTAGCCT
TGGGAGTATCATCAGTATCGGAGGTTTCACTGGATGTGGATATTATACTG
TTTGTAAATAGGTTGTTGTGGCAAATCATTGCACATTCAAAACAGGTCCA
TTGAAGGTTAATATCTATCGTGTGTAATTGGAAGATGTTGTCTGACATAA
TATTGACACAATTTATGTGGTGCCATTTATCGCAGGTGTCACATGCAATT
GCTTTTTGGTTTTTCACTGCTTTCCCACACACTCCACAAGGGTACTTTAT
TCGTTTATTTGGCATCccgaaaaaaacaaagaaaggtaCTTAACTGAAGG
CTGCACGTTGGGATGAGTGCAGCCTATAATTTATCCACTGAATCCTCTTT
CCCTTTCATTGATTTGGTTGATGTGCCAATATAGTGTGGTTGTAGATTTT
CTTCTTTGGTACACAAACGTCTTGGCTTGTTTTTTATCCACAATAATGAT
TGATTCCATAAAATGAATGACTTCCAAGAAGTTTATCAGCAAGACCAGAC
AATTTTCACTAACAGCCACCTGGGTATATCGCTCAGGTGGGTTGGGCTAC
CTTTGGCTGAAGCCCCGGGTTTAGCAGCCTCTACCGGTATTCGTTTGTta
tgttttctttctttaaaacttttgcttattcactaattcttaatggagtg
aatttttttatccgtcttagaattttgaaaatggttgaGCAATATATAGG
AACTTAGTTgaccgcgcgcacattataccCAAGGAGACGCGCTGGGCTCG
TAATAATCACGACGATTGGCAAAAAATttaaggctagtgaaaatacgtta
ttttattggttgaaactcactagcctgttacatTTTTCGGCCGTTTTCGT
GATGTGTATTTTCGATGAGTGTGGAGTGTACACATGAATATGGCACATCC
CttaaaggaagttcattctgtGATGGCCTCTCTTAGGCTAAAGGATTGAG
GTTCAAGGCTCGCCGTGGGCCTCTAAGAACCTATCTTTTTTACAAATGCT
TGTTGTTATAATTTTCTTTAGGTATAGTTTTGTTCTGGGGCTTCCTCTGA
CTTTaaattgaataattttgtctttcatttgagcattGAGCTCGCGTGCT
CTCTTGCAAAATTCTTTGATTGTCAATCGTTCCAAAATCGTGAGGTCTTC
TGTTGCTCGATAGGGTGAAGGAGGGCCTATGTATGTCGTGATGGTTCTCA
AGACTTtgttcttgtcttcttcattttcgaacaCTACCTTGATTGGTCAA
AACCTCCCTTCCTCCTCTCTCTCTTCCGTGAATACTCCAATCCTCTGTGT
GTTTACAATTTTTATGTCCTTGATGTCCTTGTACTTGATAAATTTCTCGT
CGTGAATTTTCGTTGTATTCTCGGGATCCTCCAAATGTTCTTTGATTCCA
TGGAAAATTAGGTTGCACGCTGTGGATTGTTGTTTGCCGACTGTTTCACT
TCGAGTTATTTTCTCCACCTTATTCGATTGTTGATTCATGTTTGGATACA
GCTTCTGCATAACTAAACTCTTTCAGCTCTTGCTTCTTTTCGATTATGAT
GTTCTCGATCTTTGTTTCTATCTTCTTCTCGAGTATGCTCATCTTTGCTT
CGaggctttctttgatttcttttgtaataACGTTGACGTTGATTTCAGTT
GGGagatttcttcattttgtactttcatgatgttttcacatgctttaatt
tccttttgaaCTCCTtcgattttggtgtttttgcatgTTTCAACTCGTTC
CATCAGCTCTGGTGAGATCTTAACGCAACTTTGACATTGTGATTGGAAAC
TTTGAGATTTAACCTTTAAGCAAATCTGTATTTGGTAGATTGGTAGCTGG
GAACATTTATAATGAACATCTCGGTGGCACTTCCTGCAGGTCAGAGTGTC
TTTTGGTGTCGTTTCTTCTCTAATAATGCATTTTGTTGGGGTGCAAACCT
CATTTTCAAGCAGCAATTCTTGGtcattttcattgattttttcgtccatt
ttccTTGCGAGATTCGCCAACTTAAAAAAagacaacgcaaaacgtcaaat
tgacgttatgagggggtgggggggtttcaaaagttaggtttgacgttata
agaaatcaaaggtatacctttttgtgaaaatcgcaGATACTTGTAACCAC
CAACCATACTATAATAGGCTTTCGAAAACATATTCGTGTATgaaatacat
gaaaatttgctgctcgcataatcccattggttcgcgctatgatatcatta
catcatattttcattgtttgcgcgatcgagcgaaccacatcgcacaagtt
ggcaaagaaggtggtacgCCTAAAACACGGCACgtggagcttttaatttc
tttttaaataaaggtcattagttaaaagaacacatacacgCACGGGTACA
ACCAAGTACGGACTTTGCGACGGAACgggaaaattttgatgaaaaatggc
tacAACTTTTGGTATACATCAGTACATCGCTTTACGTTATCTGTGGGGGA
GTGGGGGGttcagaggataacgtcaatttgacgttttgcgttgtcaaatg
aatttGGACGGGTCCCCTTAGAGTGAGGATGactgaagaaaatgttttgg
tcatcttgatgtaactgtcaaaaaatctcaaataaaagtgggttaaaaat
aaaaaaaatttcttctaaaGGTGCtaattttacaaaaggagcaatGTGAG
GATTTAGTGCCAAAAGTGGAGCAATCTGAGGAAACATGAGAATCGGTGGT
GTCATGTAGTCATGCACGTACCACTAAAAACactgaatttttaaaattgt
ttagcCATATTGGGACCAATTTAGTAGATCGCACGCACATTGTACATACC
AAACAAGATGCGCGCTGCGCGTGCAAAAACTTTACTTTGTCAATAAtatt
ctcaagcgaagagtaagGCTGTtcgtaaaaaattgtttggttcccgtcac
ccgaccgactgAAAAATTAGAGTCTGAGAGTCGGAAACCATTTTTTCTGA
CAGCTGAAACTCCACCATCACCctccatgttttcttttttgagagaaaga
gCAAACGCTAAACgcaaactgaggaacagataatgtgttttcttgaaata
ttttttgactcatattgagttacttctttccattttaactcatattgagt
tactttcttccttaaagtcattttagatcactagttttacattgacggat
ttctatgtcatcatattttccttttctactccaacctgattgattttctg
tgaatgttcattctagatttttgttgtatttgtattgtctttttgttttg
taggtttttgtctttattgtttccattttgagtagttgaaggttttatac
ttctagactatatatataggCACATAACTTTAACAAGATTTGATATAATC
GCTCTCTTTGTAACAATAAACTTAGTTTGCTTAGATTGGGCAGCAACAAA
GCTTAATTCAGCCACCAaacattttacattttaaatataaaaacatttta
aaataatgTATACTGGAGAAAATAAATCTATATTTTAAAAAAGATTCATG
GTGGGTTTCCTATATTATAGGAAACTGTAAAACAGCAgccatttttgtac
attttcaaTACTTTGTCAGCCGCCAAAAATGTCCCAGTAATAAATTTAAA
TCATTTAGCTTACATTTGCAAANTCAGCCGCCAAAAATGTTCCAGTAATA
AATTTAAATCATTTAGCTTACATTTGCAAAAAACAAAATCTGATTTTGTC
TATCCTAAGAAAAATGgtaaagatttaaaaacatgCTATTTTTTCAGCCG
CCAGCATTCAGCCGCCAAAAACGTACATGAACTAAGAGCTTATAACTTTT
TGTATAGTCAGCCGCCAAAGGGGAAAATTATATCATTGGAAAGCCTGACT
ATTTTTCTCTCAAATTAGTCATCCTTATCAGCCGCCAAATCTGTTAAATG
AACACTTGGGCAGCTGGGCACTTTTGTAAAGGTCCTGAAAAActtcactt
ttttggggggGTAATTTTGACTGGCATCcccaaaaaacaatttgaaaccc
GCTAATTCtgtttttccccgattttcaaGTCTGATCTTTCATTCCGGACC
ATAtggaagcatcaaaacaaaccagcgGAGCTTTTGTGAAGTGAAAAAGA
GGCTTAGGGCGATCAAACGTTTGTATACCACCCCTTTCTAAGGAAAATTC
TGCCCTCTTGGACTGTTTCgttcaaacagaaaatatttttcgcccGACCA
ACCCACTTTTTGATGGTTGGAATGACCAAGGGATTTTTTACGAACGGCCT
AAGCaaagcaattctagctttaAGATGGTGCCGGGGATTATGAGTGGGTA
GTATTCGATTATCATtatctcttttttttatttctggaacttttgcaaaa
agaaggaaaaatactgtatttctttgtgtgttttagtcagagagttgttg
taatacatttttttgctcagaatttcatgctctttcagatggtacAAACC
ATTTTCGTTTATGTTGACTTTTGAAAGTCAGCTACTTCTCTAACCCTTAT
TTCctttgcagttttgcctatggcgtcactatttttgtcataaaatgttt
tcccgggcctaatccgcgtcctccctctcaaaaatatcttgtaatatact
gttctttggaatagactaaaaatggctaggtcgtagaaaagatgtcacgg
aactccaggcttggccccctactatctgctctattcacatgctgcattcg
aaaaattttctacagtatgtggcattttttttgcaaactttaaaaaactg
ttttttccCGCTCTTGTGGGACTTTAGTTTAAGTGCTTGTGTGCAGcatt
gggtacaaagtccaaatatgcgtttcccataAACAGTTATGGCTATACTG
CTCTCCTCCAGAACTCTCAGGTTTCTCCACTGTGTCTGTTTGTATAGCAA
AGACATTGAGCAAATTGGGAGTGCTGTATACAGTAGAATAAATACAATGT
ACGGTATCTTTTCAATTTGTATTTGTGAGGGGAAacatatttctttcttt
tattaaGAAATGCTGTTCTTTACAATGTcctttaacaaaatattttctat
tttacaGGCTTTGGCAATAGTTTAAAGATACACAACCAAGAGCGCTTGTT
GAAATATCTAGAAAAAGGTGGGCGACCTGAAGGATGTTCATTGTTGACTG
TTTGCAACCATGCGTCGATGTTAGACGACCCTGCATTAATGTGTAAGTAG
CAGATGTAAAAAGGTTAGCAAGACCAAATTTGGTGGGAAATACCTTACTA
TTCTTTTGCTCTAAAAGGCTCTGTATCAAGAAGGGTTGAGGCTTGCTCTG
TTGATAAGTTTTGAATTAGCTGAACAgcatgaaaaagttgcaaaaatttc
aatcaaacaaacaaacactgTTAGGCTAAGGAGTGGAAACATTGATTCAA
AATTAGTTATGGAAAAATAATACAGATATATGTGTgcaaatttttacttt
attcaCTCCAGTGGTCGAAATAAGCTTTTTTGTTGTGATCAGTTATTTTA
GCTTGTGCTTAGTGTCACCCAAAGGGTAACCATGGCTTGGGCTGAGAGGC
AGAAAATTTTGCCCCTCATATTGGGCTTAAAACTGTCTCATTTTGatgtt
atcaattatttttaataatGAATCTTTTGACCGAAGGAAAGATAAGCTAG
ATTgttttattgccgacccaaaaaaatatcagcgctttgattggtcgaga
gcatcgagatatttgcgatatttcatatttctttagtctggaaatatgac
cgcgttgacttttgggggactgggtaagcggcgggagaaagatcaaaaca
aaacagccgaaaagaactgactttcggagaaactgacttgggaatcaaag
ggaaaaacgcaacaaaaatatgttcagattaacttaaattactttggagt
tcttccataaaagacactaaaataaaattaaatgaactaagaaattataa
aactacttgacaccacccaaatattttcaacttttggcaaatttgaCCGT
GTGgtaaccaaacaattttttatcaatgcatacaaaataacttgagattc
ttgaatgttggccaataaaatttctcataacataacaagggaagtgtaat
gtcttgtattaaaccaaatgacgagtgatttttataaaagttctctccta
attctcgttctcgacaacaacgtatgtccttgacttttcaactcaacaat
cattacatcttccttctgaaattcgaaacatttagagcttgacgataatc
aagaaagtatccaaattgtttttctgttgaaaaaatgttgttctttaacc
attattacaaggTCTATCAAGATCCAATGATGGAGGGTTTCTTCTccatc
gaaacaatactgtacatcATCTGTNNCGAAACTacacagaagcagaagaa
ggcggaagtaagttttgaaacaaaaagaggacaatttttttgagtcgaca
ataaattagttatcacacgacttctcgtgcaatactcgatattttactcg
ttccgagattttaccgatattacggaaaaatctcggaactcgtaaaatat
ttctcgtattgcactcgaaatcatgcgataactagtacgtaTAGTAGAGA
AAAAGACTTTTTCTTtgagatgttttgaaaaaagtatgATTCTAACTAAT
TCTAATCTAATTCTTTCTACAAATTATGCCTCGAAAATGTTTGAATTAGT
TTGTTACAAATACAAGGTACATGAGATATCTAGATGGAAAATGATTGTTC
CAAAAGACTGAACCATCACTCAAATATTGGTTTctttaaatctgaaaatt
tcGGATCAGTGGTTTTTTTATTTCTGGTCGGTTTTAACCGATAACCGACT
GCtatttctagcatctaatggtattttgtctcgatcctccaTCTATTATA
TATAGCTAAATATTTAGCTTTTCCTTCAATTTCTATTTCAGCATCTCTTG
TAAGAGGTAAAGACTTGCGAACATCAAGAACTATGAGATGGTAATTATGT
AAATATGCTTCAAATCTTTTTTCTCTTTGgttcatttttctatttttcat
cattAATCTGGATTTTCCTCTACTGCGGGTATGCCAGGAAATTCTCTTAT
ATTGTATTTGTGTATCTTCCAAAGAAAATCTCTTTCATTGCACTGACAGA
TTttccaagcaaaatcagtcaTAAGGAAAATCTTCTTACATTATTTTTGT
GTGATCCTTTCAttgtttttgtgtattttcaaggaaaatcattCACAGTG
CATTCAGAACTAATTTCCACATTTTTTACTGCTCTCCAATTGTTTATAGC
CCAGGGGGACatgcagttactacaagacatcaTGAGTAGTAAGTGTCTTT
TTGATGCTAACAATCTCATACCACCACCCTTTACAGTTACTACCTCtagg
tagtaactgttttccttAAAAAGTTTACGGTACCACCCCTTATTAACAGT
TACTACCTaaggtagtaactgttttcttgacaaaaaaatgaataaCCATC
CCAaaatttccccattttaaatttACTATCTGGAATCTGGCAGAACAGTA
GTGCAGGGGCTTATGTATTCTCGTGTGCACAGGTTTGTtacaagcaaact
aacttttgatCTGATGTCCTGACCCCTCATTTTGGGTTACAAAATTCTAA
CACCCCTGTTGCCATGGAAAATGATGTCATTGGTTACCAtagcaacaaaa
aattaaagtcatcaaatttaaaaaattttgctccattcgaaagagcatga
aaaactggtaaagaaaaaggtcacaacctatatctggaAATGCATATCTC
AAGATATTTAGGAAATAAGgcataatgacgtcataaatgatgacgtcatc
aaaaaatgaaaaattgtcaaaattcaaaaaattttggctCATTCGAGAGA
AAACCTTCCatggaacaaaaaatattactacgaaaaagtttcaaaatcat
ttaaagaaagtatattgataaaaaattaatatttttttatttttgcctgt
gGAAGGTTGGAGCTTGGGGCACGCCCAGCCCAGCAGATtacaggcaaaac
ttaaaaataccAATAGcctcttttaaaatgatttttaNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcttctttcattttgaaaG
TTAAAGCTTGATTTAAATAGAGCCTAAAACTGCATTCGATTTTAGTGTTG
AAACATTTCGAatgctttgaaaatatttgatttcGAAATCCAAAAAGAGG
TTTACAAATATCAGAAAATGAATACTCCCCTAAAGAAACAGTCAGTTGCC
TCCTAATAAACAGTGGGGgatttccagggggtagaaATTGTACATCTGAA
AACGCCAAAATATATGGGCTAAAATCAGGCAATTTAGAGTGAAAAAAGTA
CTTTGTGTAgtaatcaatttcatcaaatttgagaAAGGGTACCATCCGCA
ACTACAGTTACTGCCTATGGGTAGTAACTGTTTTTCTTCAGACTTGAATT
TGTTACCACCCTCAACTACAGTTACTACCTTTGGGTAGTAATCTGATGAT
TGCTGTAAGAcatgaaacttctttttttaactttgccattttgaaataaa
tttatcaCATTGCACTTATGTACATTCTAATCTAAGGAAAGTATCTTCAT
TGCATTTATGTACATTGACAttgaaatttctagcatctaatggtattttt
gtctcggtCCTCCGTCCGATATATATATGTACATTGACAAATAGAATAAC
CagaagcatttttgttttttattaaaaactatatattCGACCTCATTCAC
TAGAGGTCATCATCAAAGTAAAAATCTAATACAGAATGAggattctaaaa
tcaaaatttacagaaacaagctaattaaaatgttataaaaaattcattta
aaaaacaagtgtaaaaatctaaaatgatacCCATGGGACGCTTAACTGAG
AAAACGATGAGACTAAATGGATAGCACAATAAAAAAGAGTAATTAACAAA
GGAACTATATGTCTATATGTCTATATGTCAATACGCAACAAGTCAAAACA
CAAATTGCATACAAAAGTACAAGGTTATCATCAATGTTTAATATTAAAGA
TAAAACGTCGGCTTTACACGAAAACAATGTAGTGTATAAAGTACTATGCC
CCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAGGATTGTGGAGAAACCTACATTGGGGAAACTGAAAGACGAATTTATG
AAAGGGTCTTAGATCATAGTGGCAGAGACATAAATTCGACCGTTTTCAGA
CATTTAGCACTCAGCGGGCACGAACCGATCGCTATGGACAACGTTAAAGT
AATTGCGAAAGGTTTCAAATGTAATGACACTAGAGAATTAACAGAAGCTT
TGTTAATCACTGAACAAAAACCTTCATTGAACgttcaaaatttattcaaa
actttaCAACTTTTTACGACATAGACGTATAGTTCCTTTGTTAATTACTC
TTTTTTATTGTGCTATCATTATCGATTTAGTCTCATCGTTTTCTCagtta
ataaaaaacaaaaatgcttctGGTTATTCTATTTGTCATTAAGCTGTTAG
CCCAACGAAACACATTTCAATATTTATGTACATTATAAGGAAAATATTTC
AACATAGTTTCTATGTATTCTCAAAGGAAAATTTCTTACATTGCATTTAT
GTACATTCTAAGGAAAATATTTCTTACATTGTTTTATGTATTTTCCAAGT
AAAATTTCTTACATTGCATTTGTGTACATTCCAAGGAAAATATTTCTACA
TAGTTTCTATGTATTCTCAAAGGAAAATTTCTTACATTGCATTTATGTAC
ATTCTAAGGAAAATATTTCTTACAttgttttatatattttccaaGTAAAA
TTTCTTACATTGCATTTGTGTACATTCCAAGGAAAATATTTCtacattgt
ttttatttattcttcaaggaaaatatctcttacattgtttttatgtattc
ttcaaggaaaattTCTTACATTGCATTTATGTACATTCCAAGGAAAATAT
TTCTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCAT
TTATGTCCATTCTAAGGAAAATATTTCTTACATTGTTTTTAtgtattctt
caaggaaaattTCTTACATTGCATTTATGTACATTCCAAGGAAAATATTT
CTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCATTT
ATGTCCATTCTAAGGAAAATATTTCTTACATTGTTTTTAtgtattcttca
aggaaaattTCTTACATTGCATTTATGTACATTCCAAGGAAAATATTTCT
TACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCATTTAT
GTCCATTCTAAGGAAAATATTTCTTACATTGTTTTTAtgtattcttcaag
gaaaattTCTTACATTGCATTTATGTACATTCCAAGGAAAATATTTCTTA
CATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCATTTATGT
CCATTCTAAGGAAAATATTTCTTACATTGTTTTTAtgtattcttcaagga
aaattTCTTACATTGCATTTATGTACATTCCAAGGAAAATATTTCTTACA
TTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCATTTATGTCC
ATTCTAAGGAAAATATTTCTACATTGTTTTTAtgtattcttcaaggaaaa
tttctaattattgTTTTTATGTCCATTCTAAGGAAATATTTCTACATTGT
TTTTAtgtattcttcaaggaaaattTCTTACATTGCATTTATGTACATTT
CAAGGAAAATATCTCTTACATTGTTTTTAtgtattcttcaaggaaaattT
CTTACATTGTTTTTATGTCCATTCTAAGGAAAATATTTCTACATTCTTTT
TATGTATTCTTCAAGGAGAATTTCTTACATTGTTTTTATGTCCATTCTAA
GGAAAATATTTCTACATTGTTTTTAtgtattcttcaaggaaaattTCTTA
CATTACATTTATGTCCATTCTAAGTAAAATTTATCTTAAATGCTTAAATG
GTGTATGTATCATTCAAGGAAAATCTCTAACATTGCATTTACGTACATTC
TAAAGAAAATATCTCCTACATTTTTTTTATGTATTCTCAAAGGAAAATTT
CTTCATTGCATTTTTGTACATTCGAAGGAAAATATATCTTACATTGTTTA
CATATAATATTTCCAAGAAAAACCACTTTTTCAGCTTGTGATTGCGGGCG
gtttttattagatttttgTCTTCCCAAAAAGAAAGATAGTCTTTACATCC
ACCCGTCGCTCCAGTTTTACTGAAAATCATCAATATACTtgatttacatg
ttttttttataagcattgcacttataagcatatctaggctcagatatggg
gaaaattaagcatatggcaagcattacttgagcctacgaaaaatgttttt
ttcctgattttggctttttttggctggagtTTAcagattttcagtatttc
cctagatttatgctttagatttaagcatcccctcaagcatttttcagcct
tattaagctttcgacctaagcatctctgagcctgttttcggatttttgta
tgcttataaaaaaaaacatgtactttgAATTCAAGCATAacttttttcgt
tctttctttTGTCAAGGGTTCTTGGTGCGAAGGAGATCATGTTCACAAAC
CCATTTTTCACATTCGTATGCAGTAGAGGGAAAGTAAGTAAACCCCCAAC
AATAAGTTGTACTACTTGAAACTTAATGGAAATCTTAGAAATAGAATCTG
GTTTTCAAACGCCTTCATATGAATTGATTTCTGTCACCAACTCTTAGTGG
AATCGAAAAGGTGTTGTCTCCTTTCCTGACCAGACTGACATTGAGCTGAC
GTTGAGGACAAAGTATTTTTATAATATCCTTTGCTGGATTCATTttgtat
aattgtttttttaaatcatttttaggTGATCCCAACTGTTAGAGGTAGGT
AAATTGGCATTTATCCCTCTTTGCATGGCCCACCATCAGGACTGGTGGTG
ACTGCTAatacaaactttttcaaaagaactcATAACCCTTTCTTGATACA
TTATTTTGTCCGACAGATTAAAGCTTAGTCTAGCATGTTAGACGACTAAA
GTATAAAAGAGAGTAGGTTAAAATAAACAGACTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040863XLOC_040863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065176-exon-scaffold_433-1491911889:257505..257702TCONS_00065176-exon-scaffold_433-1491911889:257505..257702Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1510915933:257505..257702TCONS_00065176-exon-scaffold_433-1510915933:257505..257702Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1575043694:257505..257702TCONS_00065176-exon-scaffold_433-1575043694:257505..257702Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1491911889:269362..269496TCONS_00065176-exon-scaffold_433-1491911889:269362..269496Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1510915933:269362..269496TCONS_00065176-exon-scaffold_433-1510915933:269362..269496Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1575043694:269362..269496TCONS_00065176-exon-scaffold_433-1575043694:269362..269496Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1491911889:271246..271302TCONS_00065176-exon-scaffold_433-1491911889:271246..271302Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1510915933:271246..271302TCONS_00065176-exon-scaffold_433-1510915933:271246..271302Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1575043694:271246..271302TCONS_00065176-exon-scaffold_433-1575043694:271246..271302Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1491911889:276121..276187TCONS_00065176-exon-scaffold_433-1491911889:276121..276187Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1510915933:276121..276187TCONS_00065176-exon-scaffold_433-1510915933:276121..276187Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1575043694:276121..276187TCONS_00065176-exon-scaffold_433-1575043694:276121..276187Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1491911889:276430..276641TCONS_00065176-exon-scaffold_433-1491911889:276430..276641Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1510915933:276430..276641TCONS_00065176-exon-scaffold_433-1510915933:276430..276641Clytia hemisphaericaexon
TCONS_00065176-exon-scaffold_433-1575043694:276430..276641TCONS_00065176-exon-scaffold_433-1575043694:276430..276641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:257505..276641 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.51508	2.53051	5.15891	1.33315	1.46018	1.30634	0.874132	1.0162	4.39652	2.41533	3.89259	2.62639	0.715508	0.8074	2.5651	2.99043	2.38617	1.03321	0	0.569311	0.868107	3.28055	2.31151	0	2.11168	1.1763	0	0	3.8939	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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