TCONS_00065175 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065175
Unique NameTCONS_00065175
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length935

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065175 ID=TCONS_00065175|Name=TCONS_00065175|organism=Clytia hemisphaerica|type=transcript|length=935bp
ATTCGAATAAATTCCGTGTCACTTCACACGAGATCAGACGAAAAACATGG
TGAACACGAAACGGTTTGCGAGGAAAATCGTCTTCAATCTCAATACATTT
TCTCGAAGTTTTTCCTCTGTAATCGACGATACGAAAAGTCTACCATTCCC
CGAGAAGATTGGTTCTCGCTGGGAGCTTGAATCCTCTTTCTTTTTGACAA
TCGTAGGCTATTGGGGTCAAAGTATTATACGCTTTGGCAATAGTTTAAAG
ATACACAACCAAGAGCGCTTGTTGAAATATCTAGAAAAAGGTGGGCGACC
TGAAGGATGTTCATTGTTGACTGTTTGCAACCATGCGTCGATGTTAGACG
ACCCTGCATTAATGTCATCTCTTGTAAGAGGTAAAGACTTGCGAACATCA
AGAACTATGAGATGGGTTCTTGGTGCGAAGGAGATCATGTTCACAAACCC
ATTTTTCACATTCGTATGCAGTAGAGGGAAAGTAAGTAAACCCCCAACAA
TAAGTTGTACTACTTGAAACTTAATGGAAATCTTAGAAATAGAATCTGGT
TTTCAAACGCCTTCATATGAATTGATTTCTGTCACCAACTCTTAGTGGAA
TCGAAAAGGTGTTGTCTCCTTTCCTGACCAGACTGACATTGAGCTGACGT
TGAGGACAAAGTATTTTTATAATATCCTTTGCTGGATTCATTttgtataa
ttgtttttttaaatcatttttaggTGATCCCAACTGTTAGAGGTAGGTAA
ATTGGCATTTATCCCTCTTTGCATGGCCCACCATCAGGACTGGTGGTGAC
TGCTAatacaaactttttcaaaagaactcATAACCCTTTCTTGATACATT
ATTTTGTCCGACAGATTAAAGCTTAGTCTAGCATGTTAGACGACTAAAGT
ATAAAAGAGAGTAGGTTAAAATAAACAGACTACAG
Run BLAST on NCBI

transcript from alignment at scaffold_433:257473..276641+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065175 ID=TCONS_00065175|Name=TCONS_00065175|organism=Clytia hemisphaerica|type=transcript|length=19169bp|location=Sequence derived from alignment at scaffold_433:257473..276641+ (Clytia hemisphaerica)
ATTCGAATAAATTCCGTGTCACTTCACACGAGATCAGACGAAAAACATGG
TGAACACGAAACGGTTTGCGAGGAAAATCGTCTTCAATCTCAATACATTT
TCTCGAAGTTTTTCCTCTGTAATCGACGATACGAAAAGTCTACCATTCCC
CGAGAAGATTGGTTCTCGCTGGGAGCTTGAATCCTCTTTCTTTTTGACAA
TCGTAGGCTATTGGGGTCAAAGTATTATACGTAAGTAATCGATATACTGt
atcaatgtttagaaaaaggggttacgcgcgctccagaacgcttaaaagta
ccgtaagttggtctaatgtcgacatccgtcttctaatttcgacacccttc
tttagagataggaatacaatagaaactgaggaaggtcggaatcactgatt
gactttgcttagcgcgatgagaggaaaaatctttagtctatcagtgattt
cgaccttcttattattcctatctataaagaacgatgtcgaaattagaaga
cggatgtcgacattagaccaacttacggtacgttcctccactctgtttgc
attGCAAATAATACTGAGGTAATCCAGGATAATCACTACGATTGGCAAAA
AATttaaggctagtgaaaatacgttcttttattggttgaaactcactagc
atGTTTACATTTTTCGGCCGTTTTCATCGTGATTGATTATGCCGATTTGC
TAGTTAACCTCACAAATATTTAGAGTGTAGAGTCTTGAGAAGCACTAGTG
AAAGGTGAAAACAACAGCTTTTTAATTGGATATTCTTTTTGCGGGAAATC
TGTTAGGCAAAACTAGAGTGCCTTTTCTGGGTAaatatgtcgggggaaag
tgacgaaatttatAAGAATTTAGGGGCGACATCCATATTCAACCCTgcca
cgcgtaacgggaaaagaccgaTAGTTTTCAAACATACCTACACACCCTCT
TAACGGTCTTTGCAAAAAAGACCAAAATCCAACACTTTACCCACCACTGT
AAACatgttttattcttttttctcaactCTCATAAATTTATTCACAACTT
GGCCATCCACTATGCTGAAAACTGAGTGCGATTGGAAATGCGAGTGCGAG
TGAAAATCGGGAAAGAAAAACCAAATAGAGACAAGTCTTGATTACTCAAA
TAGAAGGCTAAAAGAATTGGCGGACGGTATTTTGATTGGCCCTTTCAAAG
ATAGATTACGTCactttggtaaaaaaaatttcctacgCGCGcgggaaaaa
gaaaacaaatttcaGATAAAGTTACCACGGGGGAGGGCACAAAAGCCTAT
ACTTCGAAAACACCGCGACTGTATTCGAAGAAATTGATTGACGGtagttt
gaatttgaatgaaaagcGCATTCGTGGAAGTAGAAACAAAGGCAACTACT
AGAAATATTCAGCTTTTGTAAGAATCTATTATTGGCTTTTCTTGGATATT
GAGTAGAACATTTTATTTTGGTCATGATTGCCACAGTTAACTCCCACAAG
TGGGATATACCTACccactaacggtcttttcccgttacgcgtggcAGGGT
TAaatatggacgtcgccccttAAGGCGACGACATTTTTCCCAGTTGAAGA
CTATTTTTTTCCTGGTTTTTATCCCCGGCAGAAAATTTTACCACAGCCTC
AGGATCTATAAACTCCAAAGTATCTGAAAAACACATTGGCCAAAGGGAAt
ggaaaaagaaattccaaaatactgaaattctaaaaatgtgaagaaaaaaa
acgaaaatcgaGTATATTGCACAGGCCCAGGGGGCGGGGGCGGGGGCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGTGCGAgggtaagggtaccttttttcaccttcacgagtcccaggtaa
atggaactttttttcaaaagagagTCCTACGAACGGGAGAGCGGAGCACC
CCTTttaccaacctcgttccctgcatattatcagcttttttatgctttac
tGATTGATAGCGCCCTTTTACTTCCGCCTTTCTGtgtatagtttcgaatg
tttttatttgaaaatctaattcgaacgttataGATTCGAACGAAAATATT
TGATTACTGTTTGATAGAGAAGCATTTTTCGATCCCAGAGGTTCTGTTTC
GCAGTTAGGGGTGTTGCAGATGTCttagagatgtatttgaaagtttctag
attgataattgaaaatgcagatgatgtacaGTATTATTTCGATGGAGAAG
AAACCACccttcatcattggattaatcagattgaaagCACtgagtctttt
tctatgtttttgtttcgatatgcatggaaaagaaaagcagaGGAAAGATG
CTTAAAAAGTCAAGGACGTACCTTTGTCGCAAACGAGAGAAttgggagag
aacttttataaatatCGCTCGTTATATGGTTTTTAAATACAAGACATTAG
ATTCAGTTACATTTCCCTTATTATGTTATCAGAAATCTTGcatattggca
aacattcaagaatctcaaattTTTTGTATGCAGTAATGAAAAACTGTTTG
GCTTCACACGAAcaataccaaaagctgaaaatatttggatcatgtcaagt
agttttataaatttttagttcatcagatttgattttagtgtattttatgg
AAGGAActccaaattaaaagttcatctgaaaatatttttgttgttgcATT
TCCCCCCTTTCCCTTTGTCTTTGACACTCCCTACTCCGAAAGTCATCTTT
TCGactgtttttgatttgatttttctcagACAGGCCTGTCTGTTGTTGTT
GAGTACTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNgaagattttaacttgaatatgaaactctttac
cttgaaattttgtcttCACAATTAAACCACAGTAATGTCTATGGTTAAaa
ccaagaaccaacaaacaaacTATATCTTACTCTTATTAGGTTCTTAGTAG
GGGGAGGGCTAATTGTCGGAGGGGTTTGAAAATTAATtctaaaaacccaa
aaataagctaaaatcaggctttatagagcaaaataaggagccTTCCTTCC
CTCTgtcagttgaaaatatttttacaaatttaaaTAAACGatggggggtc
ctaataaggtccgggggttggaaGATTTTCGTTTTGGAGCAATCtcatta
tttaaaatataaagcactGAGGATCCTTCACTTGCGATTGGAGTgatctg
aggatttaaaaattgatacgaaaattgatgtcatgtagtcatacacgaat
ctatctatctatctatatatttaagtaacATTAGGCCCGTAGGCCCATTT
TTGCTACATATAAAATACAAGATtgtttaataaaataattttattcataa
atatcaataaatattaaaatcattctaaaagTCAAGGGCTAACAAGAAAA
GGGGGGTGATAAGTGTGTCCAAGCTTGGAAAGTGTAAGACTTAAGACTAA
GAGATTAAAGTTATGAGATTATTTATGAGTTTGGTTGANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCCCAAGTTTGCAGTTTATCAAGATCTTCTTGGAGATGGTACA
TATCTGAAATTGATTTAATACATCTATACAAGTATGCGTCATCTGCAAAT
AATCTCAGTAGCGACTGTAGGAGTGCTGGCATGTCTTTTACATAAATTAG
AAAAAGAAGGGGCCCCAGAACAGTTCCCTGGGGTACGCCAGACAGAACAT
CAGCTGGTTGAGAAAATGATCCGTTTNaacaattttgttttaaatgaatc
TTCAGATGTTATAGTTCGAATTTGTTTTGGTAATTTATTCCAATATTTGG
TCACAGTGGGAACAAATGAGTTTGAATAAGCAAGAATTCTCCCtaatttt
tgttggaaattgtTTCCATCTCTTGAATGCTTTGGCAAAATTGTCATAGG
AAttgcaatgtttttgttgataattttgtgaAGCATCATAATGCTGGCAA
TTTTGCGATGTTGTTCAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACT
ATTCACAAAACGAGCTGCTTTTCTTTGGACTGATTCAAGCTCCTCTCGCA
GACCAGAGTTGGATGGACCTGTAGGATTCCATACACTAGATGCGTACGTT
ATCATTGGCAGAACATACGTCTTGTAAGCTtgaatttttgctttctttga
aCAACGACGAAGTGTTCGCTGTAAGAAACATCTCTTCTTGTGAGCTTTGG
TACATATTGATGAAANAGGTGATCGGTAGGCACTGCAAATTATTACAGGT
TTTCTAAAAGTCTCAACTTTGATTGCTATACATTCTGTCTTTGTTGATTT
GAAAATAGTGTCTGTTATGAGAGATTTCTTTGCAAAGATAGCAACACCAC
CCCATCCATCCTTTCGATCATTTCGGTAGGATACATATCCTGGAAGTTCC
AGTTCGGAATTTTTAATTGATGGGTCTAAGAAAGTCTCTGATCCAATCAC
AATGTCAGGGTTTTCATCTAGCAGAGTGGTGccaaaatgttcttttttac
CCCATAAGCCTTGGAAATTCACCACCATCAGGCGCAGCATTTTTGCCTTA
GCCTTGGGAGTATCATCAGTATTGGAGGTTTCACTGGATGTGGATATTAT
ACTGTTTGTAAATAGGTTGTTGTGGCAAATCATTGCACATTCAAAACAGG
TCCATTGAAGGTTAATATCTATCGTGTGTAATTGGAAGATGTTGTCTGAC
ATANTAGTTTTCTCAGAAGGTTCAGTACTCCGTTTTCCTGTATGTCGATT
GTATCAATAGTTTCGGTTGACTCTGGTGAGTTTATTGGTGGAGTATTTTG
GTTAGATGTAGAGAATACACTGCAGTATTGTTAGTTCAAAATGTCAGCTT
TCTCTTGGTCATTTACCACAAAGTTATCACCTTTCTTGAGAGGAGCAACA
GAGATATTATCAGAGCTCTTACTTTTGATGTATTTGTAGAGCTTCTTGGA
GTTGGATGAGCCAATAATTTTATCTCTAACGTAGTTGTCGTGGGCTGATC
GACATGCTTGTTTGCATTCTTTTATAATTGCTTTGTATCTATTCCAGTCA
GTATACAGTCTTGTTCGTTTAGCTCGTTTGTAGAGACGTTTCTTACGTCT
TGATAATCGTTTGCACTCTGTGGTTATCCAAGGTTGATTGTAACGTTGGG
AAAGCTGTTTGGTTGGGATCTTATCAAGAGCtgtattgaaaattgttttt
aactGTGTCCATTGATCGTTGATGGAAGACACATTATCAAGGTTCGAATC
ACAAAATTGTTTAACATCTTCAGTCAGGGTTGCTTTTATATCTGGTAGGT
TGGCTCTTTTCCAAAGGTGAATTGTCCGTCTTGATGTTTTTAGTCGAGAA
GGATGGCACAATGTGTCTGCAAGAGGGATGCTTGTATGATCGCTTATGCC
TGGGGTATCAATAATGTGTGTTAAGAGTGAGTTATTGTTTGTCAATAAAA
TATCTAAGCAATTGTCTCCTCTTGTTGGAAAGTTCACTAGCTGTGATAAG
CCACTTTCTGTGATCCAGTCTAGAGCtatttcataaatttctttaGAGTA
TTGATATCCAGTTATAGTGTGTGTCTCCCAGTCAATGTCCGGAAAGTTGA
AATCACCTCCAATCCAGATAGTTTtggttttattattgtttttgatGGAT
TTCAAGTCATTGACTAAGTTTTTTAAGTATGTGCTGTCGCTTTCAGGTGA
TCGGTAGGCACTGCAAATTATTACAGGTTTTCTAAAAGTCTCAACTTTGA
TTGCTATACATTCTGTCTTTGTTGATTTGAAAATAGTGTCTGTTATGAGA
GATTTCTTTGCAAAGATAGCAACACCACCCCATCCATCCTTTCGATCATT
TCGGTAGGATACATATCCTGGAAGTTCCAGTTCGGAATTTTTAATTGATG
GGTCTAAGAAAGTCTCTGATCCAATCACAATGTCAGGGTTTTCATCTAGC
AGAGTGGTGccaaaatgttcttttttacCCCATAAGCCTTGGAAATTCAC
CACCATCAGGCGCAGCATTTTTGCCTTAGCCTTGGGAGTATCATCAGTAT
CGGAGGTTTCACTGGATGTGGATATTATACTGTTTGTAAATAGGTTGTTG
TGGCAAATCATTGCACATTCAAAACAGGTCCATTGAAGGTTAATATCTAT
CGTGTGTAATTGGAAGATGTTGTCTGACATAATATTGACACAATTTATGT
GGTGCCATTTATCGCAGGTGTCACATGCAATTGCTTTTTGGTTTTTCACT
GCTTTCCCACACACTCCACAAGGGTACTTTATTCGTTTATTTGGCATCcc
gaaaaaaacaaagaaaggtaCTTAACTGAAGGCTGCACGTTGGGATGAGT
GCAGCCTATAATTTATCCACTGAATCCTCTTTCCCTTTCATTGATTTGGT
TGATGTGCCAATATAGTGTGGTTGTAGATTTTCTTCTTTGGTACACAAAC
GTCTTGGCTTGTTTTTTATCCACAATAATGATTGATTCCATAAAATGAAT
GACTTCCAAGAAGTTTATCAGCAAGACCAGACAATTTTCACTAACAGCCA
CCTGGGTATATCGCTCAGGTGGGTTGGGCTACCTTTGGCTGAAGCCCCGG
GTTTAGCAGCCTCTACCGGTATTCGTTTGTtatgttttctttctttaaaa
cttttgcttattcactaattcttaatggagtgaatttttttatccgtctt
agaattttgaaaatggttgaGCAATATATAGGAACTTAGTTgaccgcgcg
cacattataccCAAGGAGACGCGCTGGGCTCGTAATAATCACGACGATTG
GCAAAAAATttaaggctagtgaaaatacgttattttattggttgaaactc
actagcctgttacatTTTTCGGCCGTTTTCGTGATGTGTATTTTCGATGA
GTGTGGAGTGTACACATGAATATGGCACATCCCttaaaggaagttcattc
tgtGATGGCCTCTCTTAGGCTAAAGGATTGAGGTTCAAGGCTCGCCGTGG
GCCTCTAAGAACCTATCTTTTTTACAAATGCTTGTTGTTATAATTTTCTT
TAGGTATAGTTTTGTTCTGGGGCTTCCTCTGACTTTaaattgaataattt
tgtctttcatttgagcattGAGCTCGCGTGCTCTCTTGCAAAATTCTTTG
ATTGTCAATCGTTCCAAAATCGTGAGGTCTTCTGTTGCTCGATAGGGTGA
AGGAGGGCCTATGTATGTCGTGATGGTTCTCAAGACTTtgttcttgtctt
cttcattttcgaacaCTACCTTGATTGGTCAAAACCTCCCTTCCTCCTCT
CTCTCTTCCGTGAATACTCCAATCCTCTGTGTGTTTACAATTTTTATGTC
CTTGATGTCCTTGTACTTGATAAATTTCTCGTCGTGAATTTTCGTTGTAT
TCTCGGGATCCTCCAAATGTTCTTTGATTCCATGGAAAATTAGGTTGCAC
GCTGTGGATTGTTGTTTGCCGACTGTTTCACTTCGAGTTATTTTCTCCAC
CTTATTCGATTGTTGATTCATGTTTGGATACAGCTTCTGCATAACTAAAC
TCTTTCAGCTCTTGCTTCTTTTCGATTATGATGTTCTCGATCTTTGTTTC
TATCTTCTTCTCGAGTATGCTCATCTTTGCTTCGaggctttctttgattt
cttttgtaataACGTTGACGTTGATTTCAGTTGGGagatttcttcatttt
gtactttcatgatgttttcacatgctttaatttccttttgaaCTCCTtcg
attttggtgtttttgcatgTTTCAACTCGTTCCATCAGCTCTGGTGAGAT
CTTAACGCAACTTTGACATTGTGATTGGAAACTTTGAGATTTAACCTTTA
AGCAAATCTGTATTTGGTAGATTGGTAGCTGGGAACATTTATAATGAACA
TCTCGGTGGCACTTCCTGCAGGTCAGAGTGTCTTTTGGTGTCGTTTCTTC
TCTAATAATGCATTTTGTTGGGGTGCAAACCTCATTTTCAAGCAGCAATT
CTTGGtcattttcattgattttttcgtccattttccTTGCGAGATTCGCC
AACTTAAAAAAagacaacgcaaaacgtcaaattgacgttatgagggggtg
ggggggtttcaaaagttaggtttgacgttataagaaatcaaaggtatacc
tttttgtgaaaatcgcaGATACTTGTAACCACCAACCATACTATAATAGG
CTTTCGAAAACATATTCGTGTATgaaatacatgaaaatttgctgctcgca
taatcccattggttcgcgctatgatatcattacatcatattttcattgtt
tgcgcgatcgagcgaaccacatcgcacaagttggcaaagaaggtggtacg
CCTAAAACACGGCACgtggagcttttaatttctttttaaataaaggtcat
tagttaaaagaacacatacacgCACGGGTACAACCAAGTACGGACTTTGC
GACGGAACgggaaaattttgatgaaaaatggctacAACTTTTGGTATACA
TCAGTACATCGCTTTACGTTATCTGTGGGGGAGTGGGGGGttcagaggat
aacgtcaatttgacgttttgcgttgtcaaatgaatttGGACGGGTCCCCT
TAGAGTGAGGATGactgaagaaaatgttttggtcatcttgatgtaactgt
caaaaaatctcaaataaaagtgggttaaaaataaaaaaaatttcttctaa
aGGTGCtaattttacaaaaggagcaatGTGAGGATTTAGTGCCAAAAGTG
GAGCAATCTGAGGAAACATGAGAATCGGTGGTGTCATGTAGTCATGCACG
TACCACTAAAAACactgaatttttaaaattgtttagcCATATTGGGACCA
ATTTAGTAGATCGCACGCACATTGTACATACCAAACAAGATGCGCGCTGC
GCGTGCAAAAACTTTACTTTGTCAATAAtattctcaagcgaagagtaagG
CTGTtcgtaaaaaattgtttggttcccgtcacccgaccgactgAAAAATT
AGAGTCTGAGAGTCGGAAACCATTTTTTCTGACAGCTGAAACTCCACCAT
CACCctccatgttttcttttttgagagaaagagCAAACGCTAAACgcaaa
ctgaggaacagataatgtgttttcttgaaatattttttgactcatattga
gttacttctttccattttaactcatattgagttactttcttccttaaagt
cattttagatcactagttttacattgacggatttctatgtcatcatattt
tccttttctactccaacctgattgattttctgtgaatgttcattctagat
ttttgttgtatttgtattgtctttttgttttgtaggtttttgtctttatt
gtttccattttgagtagttgaaggttttatacttctagactatatatata
ggCACATAACTTTAACAAGATTTGATATAATCGCTCTCTTTGTAACAATA
AACTTAGTTTGCTTAGATTGGGCAGCAACAAAGCTTAATTCAGCCACCAa
acattttacattttaaatataaaaacattttaaaataatgTATACTGGAG
AAAATAAATCTATATTTTAAAAAAGATTCATGGTGGGTTTCCTATATTAT
AGGAAACTGTAAAACAGCAgccatttttgtacattttcaaTACTTTGTCA
GCCGCCAAAAATGTCCCAGTAATAAATTTAAATCATTTAGCTTACATTTG
CAAANTCAGCCGCCAAAAATGTTCCAGTAATAAATTTAAATCATTTAGCT
TACATTTGCAAAAAACAAAATCTGATTTTGTCTATCCTAAGAAAAATGgt
aaagatttaaaaacatgCTATTTTTTCAGCCGCCAGCATTCAGCCGCCAA
AAACGTACATGAACTAAGAGCTTATAACTTTTTGTATAGTCAGCCGCCAA
AGGGGAAAATTATATCATTGGAAAGCCTGACTATTTTTCTCTCAAATTAG
TCATCCTTATCAGCCGCCAAATCTGTTAAATGAACACTTGGGCAGCTGGG
CACTTTTGTAAAGGTCCTGAAAAActtcacttttttggggggGTAATTTT
GACTGGCATCcccaaaaaacaatttgaaacccGCTAATTCtgtttttccc
cgattttcaaGTCTGATCTTTCATTCCGGACCATAtggaagcatcaaaac
aaaccagcgGAGCTTTTGTGAAGTGAAAAAGAGGCTTAGGGCGATCAAAC
GTTTGTATACCACCCCTTTCTAAGGAAAATTCTGCCCTCTTGGACTGTTT
CgttcaaacagaaaatatttttcgcccGACCAACCCACTTTTTGATGGTT
GGAATGACCAAGGGATTTTTTACGAACGGCCTAAGCaaagcaattctagc
tttaAGATGGTGCCGGGGATTATGAGTGGGTAGTATTCGATTATCATtat
ctcttttttttatttctggaacttttgcaaaaagaaggaaaaatactgta
tttctttgtgtgttttagtcagagagttgttgtaatacatttttttgctc
agaatttcatgctctttcagatggtacAAACCATTTTCGTTTATGTTGAC
TTTTGAAAGTCAGCTACTTCTCTAACCCTTATTTCctttgcagttttgcc
tatggcgtcactatttttgtcataaaatgttttcccgggcctaatccgcg
tcctccctctcaaaaatatcttgtaatatactgttctttggaatagacta
aaaatggctaggtcgtagaaaagatgtcacggaactccaggcttggcccc
ctactatctgctctattcacatgctgcattcgaaaaattttctacagtat
gtggcattttttttgcaaactttaaaaaactgttttttccCGCTCTTGTG
GGACTTTAGTTTAAGTGCTTGTGTGCAGcattgggtacaaagtccaaata
tgcgtttcccataAACAGTTATGGCTATACTGCTCTCCTCCAGAACTCTC
AGGTTTCTCCACTGTGTCTGTTTGTATAGCAAAGACATTGAGCAAATTGG
GAGTGCTGTATACAGTAGAATAAATACAATGTACGGTATCTTTTCAATTT
GTATTTGTGAGGGGAAacatatttctttcttttattaaGAAATGCTGTTC
TTTACAATGTcctttaacaaaatattttctattttacaGGCTTTGGCAAT
AGTTTAAAGATACACAACCAAGAGCGCTTGTTGAAATATCTAGAAAAAGG
TGGGCGACCTGAAGGATGTTCATTGTTGACTGTTTGCAACCATGCGTCGA
TGTTAGACGACCCTGCATTAATGTGTAAGTAGCAGATGTAAAAAGGTTAG
CAAGACCAAATTTGGTGGGAAATACCTTACTATTCTTTTGCTCTAAAAGG
CTCTGTATCAAGAAGGGTTGAGGCTTGCTCTGTTGATAAGTTTTGAATTA
GCTGAACAgcatgaaaaagttgcaaaaatttcaatcaaacaaacaaacac
tgTTAGGCTAAGGAGTGGAAACATTGATTCAAAATTAGTTATGGAAAAAT
AATACAGATATATGTGTgcaaatttttactttattcaCTCCAGTGGTCGA
AATAAGCTTTTTTGTTGTGATCAGTTATTTTAGCTTGTGCTTAGTGTCAC
CCAAAGGGTAACCATGGCTTGGGCTGAGAGGCAGAAAATTTTGCCCCTCA
TATTGGGCTTAAAACTGTCTCATTTTGatgttatcaattatttttaataa
tGAATCTTTTGACCGAAGGAAAGATAAGCTAGATTgttttattgccgacc
caaaaaaatatcagcgctttgattggtcgagagcatcgagatatttgcga
tatttcatatttctttagtctggaaatatgaccgcgttgacttttggggg
actgggtaagcggcgggagaaagatcaaaacaaaacagccgaaaagaact
gactttcggagaaactgacttgggaatcaaagggaaaaacgcaacaaaaa
tatgttcagattaacttaaattactttggagttcttccataaaagacact
aaaataaaattaaatgaactaagaaattataaaactacttgacaccaccc
aaatattttcaacttttggcaaatttgaCCGTGTGgtaaccaaacaattt
tttatcaatgcatacaaaataacttgagattcttgaatgttggccaataa
aatttctcataacataacaagggaagtgtaatgtcttgtattaaaccaaa
tgacgagtgatttttataaaagttctctcctaattctcgttctcgacaac
aacgtatgtccttgacttttcaactcaacaatcattacatcttccttctg
aaattcgaaacatttagagcttgacgataatcaagaaagtatccaaattg
tttttctgttgaaaaaatgttgttctttaaccattattacaaggTCTATC
AAGATCCAATGATGGAGGGTTTCTTCTccatcgaaacaatactgtacatc
ATCTGTNNCGAAACTacacagaagcagaagaaggcggaagtaagttttga
aacaaaaagaggacaatttttttgagtcgacaataaattagttatcacac
gacttctcgtgcaatactcgatattttactcgttccgagattttaccgat
attacggaaaaatctcggaactcgtaaaatatttctcgtattgcactcga
aatcatgcgataactagtacgtaTAGTAGAGAAAAAGACTTTTTCTTtga
gatgttttgaaaaaagtatgATTCTAACTAATTCTAATCTAATTCTTTCT
ACAAATTATGCCTCGAAAATGTTTGAATTAGTTTGTTACAAATACAAGGT
ACATGAGATATCTAGATGGAAAATGATTGTTCCAAAAGACTGAACCATCA
CTCAAATATTGGTTTctttaaatctgaaaatttcGGATCAGTGGTTTTTT
TATTTCTGGTCGGTTTTAACCGATAACCGACTGCtatttctagcatctaa
tggtattttgtctcgatcctccaTCTATTATATATAGCTAAATATTTAGC
TTTTCCTTCAATTTCTATTTCAGCATCTCTTGTAAGAGGTAAAGACTTGC
GAACATCAAGAACTATGAGATGGTAATTATGTAAATATGCTTCAAATCTT
TTTTCTCTTTGgttcatttttctatttttcatcattAATCTGGATTTTCC
TCTACTGCGGGTATGCCAGGAAATTCTCTTATATTGTATTTGTGTATCTT
CCAAAGAAAATCTCTTTCATTGCACTGACAGATTttccaagcaaaatcag
tcaTAAGGAAAATCTTCTTACATTATTTTTGTGTGATCCTTTCAttgttt
ttgtgtattttcaaggaaaatcattCACAGTGCATTCAGAACTAATTTCC
ACATTTTTTACTGCTCTCCAATTGTTTATAGCCCAGGGGGACatgcagtt
actacaagacatcaTGAGTAGTAAGTGTCTTTTTGATGCTAACAATCTCA
TACCACCACCCTTTACAGTTACTACCTCtaggtagtaactgttttccttA
AAAAGTTTACGGTACCACCCCTTATTAACAGTTACTACCTaaggtagtaa
ctgttttcttgacaaaaaaatgaataaCCATCCCAaaatttccccatttt
aaatttACTATCTGGAATCTGGCAGAACAGTAGTGCAGGGGCTTATGTAT
TCTCGTGTGCACAGGTTTGTtacaagcaaactaacttttgatCTGATGTC
CTGACCCCTCATTTTGGGTTACAAAATTCTAACACCCCTGTTGCCATGGA
AAATGATGTCATTGGTTACCAtagcaacaaaaaattaaagtcatcaaatt
taaaaaattttgctccattcgaaagagcatgaaaaactggtaaagaaaaa
ggtcacaacctatatctggaAATGCATATCTCAAGATATTTAGGAAATAA
Ggcataatgacgtcataaatgatgacgtcatcaaaaaatgaaaaattgtc
aaaattcaaaaaattttggctCATTCGAGAGAAAACCTTCCatggaacaa
aaaatattactacgaaaaagtttcaaaatcatttaaagaaagtatattga
taaaaaattaatatttttttatttttgcctgtgGAAGGTTGGAGCTTGGG
GCACGCCCAGCCCAGCAGATtacaggcaaaacttaaaaataccAATAGcc
tcttttaaaatgatttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNtcttctttcattttgaaaGTTAAAGCTTGATTTAAAT
AGAGCCTAAAACTGCATTCGATTTTAGTGTTGAAACATTTCGAatgcttt
gaaaatatttgatttcGAAATCCAAAAAGAGGTTTACAAATATCAGAAAA
TGAATACTCCCCTAAAGAAACAGTCAGTTGCCTCCTAATAAACAGTGGGG
gatttccagggggtagaaATTGTACATCTGAAAACGCCAAAATATATGGG
CTAAAATCAGGCAATTTAGAGTGAAAAAAGTACTTTGTGTAgtaatcaat
ttcatcaaatttgagaAAGGGTACCATCCGCAACTACAGTTACTGCCTAT
GGGTAGTAACTGTTTTTCTTCAGACTTGAATTTGTTACCACCCTCAACTA
CAGTTACTACCTTTGGGTAGTAATCTGATGATTGCTGTAAGAcatgaaac
ttctttttttaactttgccattttgaaataaatttatcaCATTGCACTTA
TGTACATTCTAATCTAAGGAAAGTATCTTCATTGCATTTATGTACATTGA
CAttgaaatttctagcatctaatggtatttttgtctcggtCCTCCGTCCG
ATATATATATGTACATTGACAAATAGAATAACCagaagcatttttgtttt
ttattaaaaactatatattCGACCTCATTCACTAGAGGTCATCATCAAAG
TAAAAATCTAATACAGAATGAggattctaaaatcaaaatttacagaaaca
agctaattaaaatgttataaaaaattcatttaaaaaacaagtgtaaaaat
ctaaaatgatacCCATGGGACGCTTAACTGAGAAAACGATGAGACTAAAT
GGATAGCACAATAAAAAAGAGTAATTAACAAAGGAACTATATGTCTATAT
GTCTATATGTCAATACGCAACAAGTCAAAACACAAATTGCATACAAAAGT
ACAAGGTTATCATCAATGTTTAATATTAAAGATAAAACGTCGGCTTTACA
CGAAAACAATGTAGTGTATAAAGTACTATGCCCCCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGATTGTGGAGAAAC
CTACATTGGGGAAACTGAAAGACGAATTTATGAAAGGGTCTTAGATCATA
GTGGCAGAGACATAAATTCGACCGTTTTCAGACATTTAGCACTCAGCGGG
CACGAACCGATCGCTATGGACAACGTTAAAGTAATTGCGAAAGGTTTCAA
ATGTAATGACACTAGAGAATTAACAGAAGCTTTGTTAATCACTGAACAAA
AACCTTCATTGAACgttcaaaatttattcaaaactttaCAACTTTTTACG
ACATAGACGTATAGTTCCTTTGTTAATTACTCTTTTTTATTGTGCTATCA
TTATCGATTTAGTCTCATCGTTTTCTCagttaataaaaaacaaaaatgct
tctGGTTATTCTATTTGTCATTAAGCTGTTAGCCCAACGAAACACATTTC
AATATTTATGTACATTATAAGGAAAATATTTCAACATAGTTTCTATGTAT
TCTCAAAGGAAAATTTCTTACATTGCATTTATGTACATTCTAAGGAAAAT
ATTTCTTACATTGTTTTATGTATTTTCCAAGTAAAATTTCTTACATTGCA
TTTGTGTACATTCCAAGGAAAATATTTCTACATAGTTTCTATGTATTCTC
AAAGGAAAATTTCTTACATTGCATTTATGTACATTCTAAGGAAAATATTT
CTTACAttgttttatatattttccaaGTAAAATTTCTTACATTGCATTTG
TGTACATTCCAAGGAAAATATTTCtacattgtttttatttattcttcaag
gaaaatatctcttacattgtttttatgtattcttcaaggaaaattTCTTA
CATTGCATTTATGTACATTCCAAGGAAAATATTTCTTACATTGTTTTTAt
gtattcttcaaggaaaattTCTTACATTGCATTTATGTCCATTCTAAGGA
AAATATTTCTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACA
TTGCATTTATGTACATTCCAAGGAAAATATTTCTTACATTGTTTTTAtgt
attcttcaaggaaaattTCTTACATTGCATTTATGTCCATTCTAAGGAAA
ATATTTCTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATT
GCATTTATGTACATTCCAAGGAAAATATTTCTTACATTGTTTTTAtgtat
tcttcaaggaaaattTCTTACATTGCATTTATGTCCATTCTAAGGAAAAT
ATTTCTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGC
ATTTATGTACATTCCAAGGAAAATATTTCTTACATTGTTTTTAtgtattc
ttcaaggaaaattTCTTACATTGCATTTATGTCCATTCTAAGGAAAATAT
TTCTTACATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGCAT
TTATGTACATTCCAAGGAAAATATTTCTTACATTGTTTTTAtgtattctt
caaggaaaattTCTTACATTGCATTTATGTCCATTCTAAGGAAAATATTT
CTACATTGTTTTTAtgtattcttcaaggaaaatttctaattattgTTTTT
ATGTCCATTCTAAGGAAATATTTCTACATTGTTTTTAtgtattcttcaag
gaaaattTCTTACATTGCATTTATGTACATTTCAAGGAAAATATCTCTTA
CATTGTTTTTAtgtattcttcaaggaaaattTCTTACATTGTTTTTATGT
CCATTCTAAGGAAAATATTTCTACATTCTTTTTATGTATTCTTCAAGGAG
AATTTCTTACATTGTTTTTATGTCCATTCTAAGGAAAATATTTCTACATT
GTTTTTAtgtattcttcaaggaaaattTCTTACATTACATTTATGTCCAT
TCTAAGTAAAATTTATCTTAAATGCTTAAATGGTGTATGTATCATTCAAG
GAAAATCTCTAACATTGCATTTACGTACATTCTAAAGAAAATATCTCCTA
CATTTTTTTTATGTATTCTCAAAGGAAAATTTCTTCATTGCATTTTTGTA
CATTCGAAGGAAAATATATCTTACATTGTTTACATATAATATTTCCAAGA
AAAACCACTTTTTCAGCTTGTGATTGCGGGCGgtttttattagatttttg
TCTTCCCAAAAAGAAAGATAGTCTTTACATCCACCCGTCGCTCCAGTTTT
ACTGAAAATCATCAATATACTtgatttacatgttttttttataagcattg
cacttataagcatatctaggctcagatatggggaaaattaagcatatggc
aagcattacttgagcctacgaaaaatgtttttttcctgattttggctttt
tttggctggagtTTAcagattttcagtatttccctagatttatgctttag
atttaagcatcccctcaagcatttttcagccttattaagctttcgaccta
agcatctctgagcctgttttcggatttttgtatgcttataaaaaaaaaca
tgtactttgAATTCAAGCATAacttttttcgttctttctttTGTCAAGGG
TTCTTGGTGCGAAGGAGATCATGTTCACAAACCCATTTTTCACATTCGTA
TGCAGTAGAGGGAAAGTAAGTAAACCCCCAACAATAAGTTGTACTACTTG
AAACTTAATGGAAATCTTAGAAATAGAATCTGGTTTTCAAACGCCTTCAT
ATGAATTGATTTCTGTCACCAACTCTTAGTGGAATCGAAAAGGTGTTGTC
TCCTTTCCTGACCAGACTGACATTGAGCTGACGTTGAGGACAAAGTATTT
TTATAATATCCTTTGCTGGATTCATTttgtataattgtttttttaaatca
tttttaggTGATCCCAACTGTTAGAGGTAGGTAAATTGGCATTTATCCCT
CTTTGCATGGCCCACCATCAGGACTGGTGGTGACTGCTAatacaaacttt
ttcaaaagaactcATAACCCTTTCTTGATACATTATTTTGTCCGACAGAT
TAAAGCTTAGTCTAGCATGTTAGACGACTAAAGTATAAAAGAGAGTAGGT
TAAAATAAACAGACTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040863XLOC_040863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065175-exon-scaffold_433-1491911889:257473..257702TCONS_00065175-exon-scaffold_433-1491911889:257473..257702Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1510915933:257473..257702TCONS_00065175-exon-scaffold_433-1510915933:257473..257702Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1575043694:257473..257702TCONS_00065175-exon-scaffold_433-1575043694:257473..257702Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1491911889:269362..269496TCONS_00065175-exon-scaffold_433-1491911889:269362..269496Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1510915933:269362..269496TCONS_00065175-exon-scaffold_433-1510915933:269362..269496Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1575043694:269362..269496TCONS_00065175-exon-scaffold_433-1575043694:269362..269496Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1491911889:271246..271294TCONS_00065175-exon-scaffold_433-1491911889:271246..271294Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1510915933:271246..271294TCONS_00065175-exon-scaffold_433-1510915933:271246..271294Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1575043694:271246..271294TCONS_00065175-exon-scaffold_433-1575043694:271246..271294Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1491911889:276121..276641TCONS_00065175-exon-scaffold_433-1491911889:276121..276641Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1510915933:276121..276641TCONS_00065175-exon-scaffold_433-1510915933:276121..276641Clytia hemisphaericaexon
TCONS_00065175-exon-scaffold_433-1575043694:276121..276641TCONS_00065175-exon-scaffold_433-1575043694:276121..276641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:257473..276641 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.545548	0.394416	0.325645	0.439293	0.335977	0.528944	0.8707	0.463882	0.78942	0.257212	0.248515	0	0.0926994	0.425105	0.14148	0.619199	0.556503	0.419435	0	0.27235	0	0.218779	0.308631	0.292375	2.40251	0.524616	0.182495	0	0	0.156186
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065175 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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