TCONS_00065114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065114
Unique NameTCONS_00065114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1700

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065114 ID=TCONS_00065114|Name=TCONS_00065114|organism=Clytia hemisphaerica|type=transcript|length=1700bp
AAGTGGCGGAGGGCGCTCCCGCCCACAAGGTGGCGTGATTCCAAACAATA
ACTTCTAGACATAAAGAACAGTAAACAAGATGGAGCAAAAATATCGCTTA
TTCACACTCaacaaataattttatttttgtttaacacTCAACTCTGATAA
TATCAGTCTGTGgCAACTGAAATGAAAAAGTATGTCATCAAGGGATCATG
AAACTGGCAGTACCAGATCAAACAATCTTGTACCAGAGGCCTtccaacaa
agaaaatgttgaaaGAAGTTTCAAGAGTTTCACAAGGACCTCAAAATGAG
CATCTAAGGCAGCAAGCCATCTCATGTGAAACATCAGCCACCTCTACACC
TGGATATATTACaccaccaaaatttgaaaacatgaCAGATGATGAAATTA
GTTTAAATGGTGatagtcaaaacaaaaaagtgaaGTTCAATGATGTTCGA
GAAGTACGTTCGCTTGCGAAACGTCATGCAGAAGCACAGATTTTGTCAAG
AATGTCCCATAACTCTGTTGAAGAGTTGAGAGGCATCTTACTTTCACTTG
ATCAGAAGCTTCCATTAAAAGAAACTATCAAACTTTCAGTGTATTTTGTT
GTGTTGTGGGTTTTCGCTACCTTGGGTTATCAGGCAGCTCTTGCCAATAC
AACACCATCAGTCGCTAATATCCTGTCAGCCACATCTGGAATTTTCACTC
TGTGTTTTGCTGCTTGTTTTCCCTCTTCAAGTGCGGACtggttcaatttt
tcaaaactgttGTCAGTACTTGTTAGTTTTGGTGGAGTTTTTATTGTTTG
CTGGACGGACCCTGCAAAGAAAGATTCCACAGTTAATATTGGTGACTTAT
ATGCCATTGGAGGTGCAATACTATACGCTACTTATCTTGTCTTGATTAGA
AGAAAAGTTGGCGAGGATCGTAAATTAGACATGCCATTATTCTTTGGCTT
TGTTGGACTATTTGGTGCCTTGTTTTTTTGGCCAGGCTTTTTCATTTTAC
ATTACACTAATGTCGAGAGGTTTGAACTCCCACCAGATCTGAAAACTTGG
CTTTTACTGATTCTAAATGCAGCAATTGGAACCCTTCTGTCAGAAATTTT
ATGGTTGTGGGGTTGCTTTTTAACAAGCTCTTTGTTAGCTACTTTATCGC
TTGGTTTGGTTGCACCACTGTCAATGGCGTTTGATATCATTGTACACAAG
GTGCAATTTTCATACCTATTTTTTCTGGGAGTTGCACCAATCCTTATTTC
CTTTGTTGTTGTAAGCCTTTTGACTCATTACGAGGGCTATGATCCTGTCA
TGAATTGTTTTTCAAAGATATTTGGTAATACCAAACAGGAGCCCAACCCT
GACGAAAGGGAATCTTTACTTGAAAATGATGCAGTTGCCTGATTTTGGCA
AAATACAATTCACAGAAGCTGTTCTTTATCTATAATCCCACATCGAAGAG
TATATTGAACcttacaaaaattgaaaataggaAATCAAATTGTAAATAAA
TTAATATCAATTAATGCATTTTGTATTCAGATAATTCCAACAAAACAGGT
AATATATTGTTCTGTTtggaaaaattaatagaaattctataaatattttt
ttgataataattCTTTAAactttaagtttttctttttgttatttttgtat
ttggttaatttaatttttttttgggatGCAATTGACTATCTTAATGGAgg
Run BLAST on NCBI

transcript from alignment at scaffold_430:65024..84019-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065114 ID=TCONS_00065114|Name=TCONS_00065114|organism=Clytia hemisphaerica|type=transcript|length=18996bp|location=Sequence derived from alignment at scaffold_430:65024..84019- (Clytia hemisphaerica)
AAGTGGCGGAGGGCGCTCCCGCCCACAAGGTGGCGTGATTCCAAACAATA ACTTCTAGACATAAAGAACAGTAAACAAGATGGAGCAAAAATATCGCTTA TTCACACTCAACAAATAATTTTATTTTTGTTTAACACTCAACTCTGATAA TATCAGTCTGTGGTATGCTACTCTTATTCTACATTTGTATATGTTTTTTT GTTACATTATTTTTTCTGAACCAAATTCCAATCACGCGGTAATGATGACT AGCTACAAAAGCATCCAGCAAGGACCTTTTTTTATACATCTGTTTCTGTT TCCCAGGCCAGGCATAGAGTCCCCTGCCCAGTTGGCGACCGGTCTAGTTG GCAACCAAACGTCTTTGAACCCAGAAAAGTCATACAAAAACAAACCTCTG GAAAATTTCTTTTGGTAGTTATCTGCCTTGACCTATTTCCCATACTGTGT AAAAAAAATTCCAGAAAATAACTAGTAGAATCCGAAAGATCCAACTTTGC ACGGAAGCACACGAAAAACCCGGATTTTTTTGAAAAAAATAAAAAATGGC TACCTGTGAACAAAAAAGCTTTGTAAGAAAAAACGCTTCAACTCCCACTC CAAAAAATACTTGTCCAAAGTGATGAGTATGTTAGAAAGCATTTCTGTAA AAATCAGCTCGATACAGTTTCCTTCGTGTGAAATATTGATAAAAAAGTTG ATGCAATCAGCTTCGAAATTTGAGGTCCAGTCTGCGAACGACCAAACTCA AAAAATGAAAAAGAATACTCTACATTGCGATCAAAACATTCCAGACGCGA AGAGAAAAAAAGAAGACTTTACATTGCTTGCGATCAAAACATTCAAGGGG CATCCCCGTGGTCTTTAACTTGACAGCTCCAATGCAAAGTTTCTAGCTCC GGGGATTGAAATAACAAGAAACGGTATATATATTGAATCTCCGGGTAGAC ATAAAAAATTCCCGCGTTTTTATCAAATGAAGACTCTCCATAGACTGCCA CTTTCAAAACAAAACAAAAACAAACTTTAGAAAAAATGGCGACTTGAAGA AAAATTCTGAAAAAACATGCCTAAGGGAAATGTAAGTGAGCTATTTTAAA ACAAAAGAACGAGTGTAAATAAATTTAATAAGGGAAAGTGTAAACGACAC TTAAGGACAAATGTGGGTGTGTTTCGACTCGTTTTCTCTTCAGAAATACG GCTAAAAAGCAACAAAAGTACAAAGGATAAATGACTAAAAAATACTAAGA AATAACATGAAAAATGAAATGTATCTACATGTTAACACGAGAAACAAAAT GGAAGTCAAAGAAAAAGAACAAGTTATAAAACGAAAATACGTACTGAAAA TACTTTCCATTCACACACCTCACAGACAACATCAAAACAGTAACTGAATC TCAACATGCCTTCAAAACATTTAAAACGTAGAAGTTCGCTAACAGAACAA TCAAAATACCCGAGAGACATGGAACTGGCTAGAGCACGATACAATAGTAA CAAAGACAATAGACAGAACAACACCAATACAATAATAAACGATTAACGAT ATAACTCAACTCCCAAAGGACTAGCACTCACATAAACAGCTAATTATTTA CATTTTTAAAGCAATTACTAAAAGATAAACTAGGGAATATATACAAAGGA AAACTATGCAAAACGGCAGTAACAGAAAGCTTATGAGTTTTTTCATCATC CTGATCAATTAATATGACCTTACCTGCAAGAAGAGCACTGATTTTCTCTT TCTTGCGATCGGTCGCAGACTGGTACGTCGGTCGGGAACTGGGCACTAGT ACCGCTCGCTTCGAAAGTTTTTTATTCTAAGAAGATCGCCTCAAATAAAA AATCAAAACAAACACGAAGAGCATGTTAAAAGTTGTCTAACCGTTGGTCG AAAAGGAATTTCAAAAAAGTAAAAAGTAAGTGAAAAATTTGATTAAAAAA ATTTCGGTCGCCAACTGGGCAGGGTACTCTATCTATCTCAATGGCTGCTT CTGTAGCTAGATGTTCTTTTTTGTGGGTCATAATAGACATAGACCCAGAC GTAATTAATCGAACTTTGTCCAACATAATCGAACTTTGTTGGTCGATTAA TGTTCGACTAAGTTCGGTTGTCGAACTTTAATCGAATACTCACAAATTTC TCAAAATACAAAGTTCGATTAAGTTCAGTACTTAATCGAACTTTTTTTAA AGAGACCTCGACAGTTCGATTAGTTTGATTACATTGATCAAACTTAATCG AACTAATCGAACTTTGTCAAGTTTAATCGAACAAAAATGTGAGAAAACCC GAGCAACTGAAACAACCGCTCCACTTGCGCGTAATTCGATCGCACTTTTT GCTGGCCTTTAACGACACTTTGAGGAACTTTGAAGCACCCGGAACCCCGG CCAGGACCCCCAGGGGCCGTCCACGTTGGTACCCAAGTATGAGGTCATTT TTCCCAATTTTGACCAATTTTCGCCAATTTTCCAATTTTTGCCTTTTAAA GGCTTCGGAGAACTGATGGAGGGTACTGGCTTTGAGGGAGAGCAAGGCAG AGGGTATCCGAAGGGGTTCGAAGGGCTATGGGGGCTGTGGAGGGCTGTAG AGGCNCTGGCTTTGAGGGAGAGCAAGGCAGAGGGTATCCGAAGTGGTTCG AAGGGCTATGGAGGGCTGTAGAGGTCTCAATTTGTCTCACCGGCGATTTT TCCTGGTGAGAAAGGGGTGTAGCAGCCTCAATTGAGGAGGTCATTTTTGG CAATTTTTTCCGGCTTTTGACAGCACTTCGAGGAACTTTGAAGGACCCCC AACGGTGCAGGCGTGTACTCTCACATCCCCCTGACCAGTGAGCACCGATC GGACCCCCGGCACACCGGCCGGGATCTCCAGGGGCCGTCCGCGGTGGTAC CCAAAGGAGGTCATTTTTTTCCAATTTTGACCAATTTTCAAGCCTTTCCG CCTTTCCAAGTCTTTTAAAGGCTTTGGATAACTGATGGAGGGTGCTGGCT TTGAGAGAAAGCAAGGCAGAGGGTATCCGAAGCGGTCCAAAGGGGTCCGA AGGGCTGTGGTAGGCTGTGGGGGCCTGTAGAGGCCTCGATTGGTCCCACC GGGGCTGGTACCCAAAGGAGGTCATTTTTTGCAATTTTTGCCGGCTTTTG ACAACACTTTGAGGAACTTTGAAGGACTCTCACTGGTGCAGGCGTGTACC CTCACATCCCCCTGACCAGTGGGCACCAATCGGACCCCCGGGACCTCGGC CGGGACCCCCAGGGGCCGTCCACGGTAGTACCCAAAGGAGGTCATTTTTT GCTGTCGAACTTTTTCGAACGGAGTTTTTTGTCGAATTTGTCGAACCTTT CTTGTTGTCGAACTTTATCGAACGGAGTTTTTTGTCTAATTTGTCGAACA TTTCTCGTTGTCGAACTTTGTTGAACTTAATATGTTTTGTCGAACTTAAA GAATTTAATCTAACTTTTGTCGTTCGATTAAGTTCGACAAAGTTCGATTA GTTCGGTAATCGAACTGTTCGATTAATTACGTCTGGATAGACTTCACGAC GCACGATAACACAATATCATTGACATTGTATAGTTATAGAGCAATAAAAA ATACCCCCTTTCTATTATGTTTAGTTTGTTTGTTCTTTGGGGTGCATGTC ACTAGTCCGACACTTTCTAGTCCGACAGTAAAATGGTCCGAATCTATAAA ATATATTTACAATTTAGAAGCCTTTTTTCCGACGTCACTTTTGTCCGAAA AACGAAAGATTTTAGAGTGTCGAATGTTGAATAAGGGTTTTTCACTGAGA TAATATAAAATAATATAATATGTTCATTTTGGCGGCATTTTGACATTATA AACAAACATCGATGAAACAAAGGACCAATCAAATTTGCGTAAAGATAATT TATAACAAAAAGAATGCACCGCCTTTNTTAAAAAACTATAAGAAAACACC TATTTTGCTACTTCTTTCATTTGTTTATCTATTGCTTTATAAACTCGCTA CTTCGCTAATTTATTCACTTGTTTATCTATTGCTTTATCAACTTGCCACT TCGCTACTTTATTCACTCGTTTATCTATTGCTTTATCAACTCGCTATNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC AAAAGAAGAAGGGTCGTAAAAACAGCTAAATCCAATTTCTTGACTTTTGA AAGCCTTATCCTGATAAGCTTCCCGAAATTTAAGAAAAGTCCGGTTTAGG GGCCCAACCTCAAAAACGGAACTTTGGATTTTTATAAGCACGTGGTTACT TATAAAAGATGTGCCTCCTCTTTGGCAATTCATATTTCGTTTTACAGTAG GGCTTTCGCATGTCTTTACGTGTGCGCGAAGCTCGCGCGTTGCGAGTACA TAATGTATAGGTGTTAGAAATCCAATTTATTCAGACTCGTTCAATGCGAG TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TTTATCTACTTGTCACTTCGCTACTTTCATTCGTTCGTTTATCTATTACT TTATCTACTTGTCACTTCGCTATTTTATTCACTCGTTTATCTGTTGCTTT ATAAACTCGCTACATCGCTAATTTATTCACTCGTTTATCTATTGCTTTAT CAACTCGCTACTTCGCTAATTTATTCACTCGTTTAAAAATCCATTGCTTT ATCTACTTGTCACTTCGCTATTTTATTCACTCGTTTATCTATGTCATCTA TTGCTTTATAAACTCGCTACCTCGCTAATTTCTTCATTCGTTCATCAATT GCTTTATAAACTCGCAACTTTAGAAAAAATTAAATCTAAAAAACCTATGC TATGGGCTGAAATGAAATATCATCTCAGAAATAACATAACCGATGACATA AGATCAACTAGTTGATGGTATTAAAAGCTTTTGGGATATGGTTGGCCAAG CGAAATGCCGATACATTAACCCATAGACGTCAATCATATAAACAAAGTAT TGCCAATAGTGGTTAAACGAGGGGTAAAGCTTCAGGACACTAAAAAATGA TAGCTATTTTCATTGACGTTTCATCAGTGTTTTTTGTTAACGATGTCAGT ATGAAAAAATAAGGGTTAAAACTTTATTTTCCAAAACGAATCTTCCAGAA TAAATTTCTGGACAGGGGAGACAAGTTAAAATATCCAGTATTTGTATATT AGAACGTCACATTCAGATTAGGAAGTCTTAATTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNGTCGCCAATAAATAGGTTTTCAATAGTGAAA GAAGCCGCTTGCGAGTCTCTGACACGCAAGGTTCGCGTACGTGTAAAGAC ATGCGAAAGCCCCACTGTATATGTTTTTTTGACTCGTTGTCAAACAAAAT TGTTGTTGGAATACTAACGCATTCGTTAAATCCAACGTCGGACATTTTTA CTGTCGGACTAGAAAGTGTCGGACTACTGACGACCTCCCGTTCTTTGAAG ATCTTTGAAAAACTTTTGTTTGCCATCAGACCGCGCAGTAATCTTTGTCC ACTTCAATTCATAGATAATGAACAATGGAATGAATAATAAAAGTGGGCTT TCTATCTAAAAGCCGTGCTCACGGGCGATAAATCAGCTTGGTAAATACCG TGTGTTTTGCTTTTGATACAAATAAGCTCTCACATTCTTTTTATAGACCT TTTCGCTTTTCCATCCGCCATATTGAATTGTATGCAAAAATTAGGGTGGC CGAATTGCCGTGGTGTTTTTCTGGGTGTTAAACGTATAAAAGAAAATTGA AATGTTTTACTTTTTTCTTCATTATTATATTTAAGTTTCCGTTATCGAAA TTCTAGAAATGCTAATTTGTAGACCATATTAGAAAATGTTTATATATTTC GCAAAATAAACACTTACAAAAAGATATTACTTACTATTTTTACCCCCGCT TTTTAAACAGCGTCTTCTGTGGGCGTGATATCAGGCGGAGACAAACGCCC TCATCGTAAGATTCTCGGGTCGTCTTATTGTTTGTTCCTTTTGTCAAGTC TGTCGGTCCTATCGTTCATGCTAAATCCATACATGATGACGTCAATGTTT GGCGGCATACCTGAAAATAAAAACAAAAAGATTATTATTATTTTTGCATA AATTACGCTACCTTATACGTTATTATAAAATTATACAAAACGAAAACGAG TCTAGGCCGCCCGCCTAGAGAGCGCGAGCCCTAATATCTTTTCTCTCGCG GCCTTCAGGGGAAAACGAAAGTGATCGATATTCTTCGAAGGAAGAACCTG CCAAAAAAAACCCTAGACAAAAAGATGTCTTTCGAGGTTGGGAATGGATC CTGCGAAGATGAAAAATTTTTGACTAGGGGTCTTTTTGGCAAACCCAAAA ACTCTAATTTTTTTCTTCCCTTATGCTAAAAAGGTTACGGGTTTTGGGCA ATCGAGGCAAAAATCAGCAAAAAGCTGGTAAATCTGAGAATCGCGATAAG ATCCTCACTGATTAGAAAGCTGCCAAATGATCAAGTCAAAACATTGATCT GAACCCGCTGAATGTTTGACGTCATAATTAATGCTTTCAGTTTGCGTGTT TAGAAAGTTGATGTGTGTACTCCGTCTTTGTGGAATTTTTTAATGGCATG AAAACAGAATATGCTATGTCTTTAAGAACAAATTTCTAAAAGGCTTTTGT TGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTCTAAAAGGCT TTTGTTGTTCTGTAAATATTTCTTTTTGGATTAAGAAATTCCATCTTTTA TTGTTCTAATGATTATAATATTTCTTTATAAAATGCTTTGTTGGCTTTTT AATCTTTGTGTAAACTTGCATATGTTTTGCATATTTTCCAACCAAATCCA ACCACGGCTTTTTCGTTCCTGTATTTTTGCATACAATTTAAGATGACGGA TGGAAAGGCGAAAAGATCTATGCACCCTGACAGCTGACAGAAGTATTCCC CATGCAATTTTTATATCGAAATCTGCAATAAAAACGAAAGTGGTCTCTTC TTCTCAGTTGCTTTCATAATTTGCTCCATTGGACAGTTCGTCACAAAGTG CCATATAAACAAAACTCAACATCCTTACAAAAGTTGTCTTTTTGATTTCC CAAACATTCGTCTCAAGTGTTCACTTCCACAATAATTTATGTAATTGCAA TTTCTGTCAATCCACAGTCGGGTTCAACATACACGCGTGTTTTTATTCAC GTGACTGAAGTGCCTACTAAAACAATCTGGGGGTAAGTGGCGAAGCAACA TAGCAGATTATTCGTAAAGTAAAGAAATATCTTTTGGCATTGACAATCAA ATATAATATATTACATTATAGTTCCTTAATTCAAAAATCAAAAATTCATT TTGCAATCGCGAAAAAATAAAAAAATAAATTAATATTACATATTGTTAAC CGGTTACTTTTTCGAAGCGGGCTACACGGTTTTTTGCGCAATACAATTGG TTCTTTTCACATGACAACGGGCCTACACTGCCCAGAGTTGCCCGTCGTTA GGAAAATTCACTGTGACGTCACTTTTTCAAAGGAAAATTAACAATGCGTT GACATCATTTCTCTCATTTTGAATTTCTGACGTCAGAAATTATAACAATT TTTTATCACTTTTCGCTTGTTTTTTCGCTTTATTTCGCTATTTCTCCTGG ATAAAGCGCTAAAAATCAATCGAAGCTGAAGGAAACGGTTAACAAATATA ATAATGACCACCAACTTTCTCGGCCACTCGTAATAATTATGCATAATTTG GTTCTCCATTGTTAAGTCAGGATCGATGGTGACGTCACCTAAGCATAAAA AAGAAAGGATTTCGTCAGTTTTATGCATTTATTAATTTGCGAGATATTCT GTTTGCCATGCGAGTGCACTTTTCGTAGACTAGTCGGAATACCTTCTTTT ACTCGCGGAATTGATGGTAACTTTTCATCTTCGTTATTTTTAAAATGAAG CACAACCAAAAAAAACGAAGCTTCAAAAAGTTTTGATAATTAACAAAATT GATGATGATGATTTTTTTTCGGTCAGGCAAATGTCTCGTATTGGGGGTTC TAGTCTTGACCCCTAAGCCTACGCAAGATTGAAGTGTTTGGGTAAACAAG ACAAAACTTGAAAAAAGCTGGTGTTTTGAAGCGCATCCGTGCGATCGAAA TATCGCTCTTTGTGACGCACTGTTGGAAATCTTTTGTAAATTTCAACCAA TTAGATTTCCGTGTATGATGAAGGTTAACGACTGGCCCTACTTTTCGGCG CTAATGGCCTTTTGGGGCCTTGGATAACCAGTAGTCATTTAACTTTATTT TTTTCAATCGTTGATTCTAAGGGATGAATTTTTACTTATCTTTAGTTCTC AAACGAAAGCGGGATTTTGATGTGAGCGTTATTTTTTCAAACAATCCTTT GATTGGATGAAAGCGCTTTACCTTCATTTGACATCGTTGTTATTTGATAA TAAAATATTTTGCACTTTCACAAGCGTTTGCGATTGAACAAAATAAAACA ATCTCAATATTTTCCAGGGGGTGAATTTTTAGTTTTTCTTCTATTTCTTC ATGTTCGCCAATCCGGGGAGTCTTCATTTATATACCACAGGAAAACTCAT GAAACCCGCCAACTTAATCTTGAGTTTGGGAAATCCCCAAGATTGGCGAA CAATTATTTTTTCCCACTTACAGCTTTTTTCTTTGATCTTTTATTGGTTT CTTTTGTTAATTTCTTGCACCATCAATGACTTGCGCAAAATTTTCTTGAA ATGGAAACACACCGATTTTACCAAGCTGTAAATTTATGTTCACTTATGCA GGGCTGCAAATAAGCGTCGGTCATCGGTCAATGTCCGACTGAAAAGGCCA TTTGGCCGACTGAAAATCTTTTGTGTCACTCATGATTTCCGAATGAAAAG ATGAATAAAACCATTAGCTTGATTTGAGAGCAAATCTTCTGTACATCCCT GCCTCTTAAACTCTATTCTCTAATGCCCAGAATGTGACGATTTTCGAAGA AAAAAAATTTTTCGGCCGAAAATGCCAGAAATATGCCGGAAAAACTGTTT TTTTGGCATTTTCTTGAGATTTTATCATTATTTTTTCTGATTTTTTTGCT CAAAGATGCGTATTAACAATGCCCAAAACGAGTCCGATTTTTGAGAAAAT TTTTTTTCCCGCTGAAAATGCCGGAAATCGCCGTTTTTCTGGATTTTCAT TGGACTTTTCCCTTATAAGTAGTTGTTTTTTTCATTCAAAAACATTATAA ATAGCAATGCCCACCATCAATCATGTTTCAATTTTCAATAAAATTGATTT TTGAAGCCGGAACTATTCAAAAATCGCCGGAACAACCTATTTTCGCCGGA AAGACCGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTTATGA AATTTTGCACACTGATGCATAATGATAATACCTAAAATGTGACGGAGACC GAGTTTCGAAAAACATTTTTTTCCGGCCGAAAATGCCGGAAATATGCCGG AAAAACTGTTTTTTTTGGCATTTTCTCGAGATTTTATCATTAGTTTTTTC TGATTTTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATGGGCGAG TCCGATTTTTAAGAAAATTTTTTTTCCGGCCAAAAATACCGGAAATTTCC GTTTTTGCAGATTTTCATTGGATTTTTTCGTTTTATGCCTTTGTTTTTTT CAAACAAAAACATTATTTATAAGAATGTCCATGATTAAGCATGGTTCAAT TTTCAATGAAACTGATTTTGGTACAGAAACTTTCTAAAANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTTTCTAAAAATCGCCAGA ACAGCCGAGAATCGCCGGATTTCTTGAATTTCTCGAGTTGTTCTTGTATT ATTCTGCATTTTCATACTATTGTTGTCTTTTTTCGATTGTCTTATTACAT CAATCTTCAGGTAGGTCCATTCAGCATATGGCTTGTTTAATTTCCTCTTT GTAACTTTCAAGAGTGTTTCTAAGTTCTCTTTTATTGAATCGCTTTTTCC GTTACTTTAAGGAGTGTTTCTAAGACCACATTTATCAAATCGCTTTCTTC GTAACTTTCATTCAAGATTGTGTCTAAGTTCACTTTTATCAAATTGCCTT CTTCGTTACTTTTAGGAGTGTTTCTAAGATCACTTTTATCAAATTGCTTT CTTCGTAGTTTTTAAAGACTGTTTCTAATTTCACTTTTATCAACTTACCA CTTTCTCTATTCTGTATAAACTAAACAAGCTGTTCCAAGTTCATTGTTAT CTATTAGCTTTCTGTGTAACTTTCAAACGCTATCTTCTGGTTGAAAATTA TAACGACTGAATGACCCAGAGGATCTTGAGAATCTTGAGTTTGACCGACT TGATTTGATTTCAGTCGGACATAATGTCCGAGTGACCAAAAATATTTATT TGCAGCCCTGCTTATGGCCAAGCCCAATTGATAGTTTGGTTCATGTCCTC TGACCGACTCTAAATATTTGAGAAAAAGTGTTTCATTTTGAGTCGGAAAA ATTAATTTTTTTTACGTCCTTTTCATGTGATTCCTTTTAATCACACGCCA CAAACACCTTAATCTCTTAGTGTAGAAGTTATCTTACAATCGCACAGCGC GGGCCTTTGTGGATCCAAGAAAACTTTTTCTTTACGTTTGCATTTGGATT CCAGGATTGCGCGATTGCTCAAGGAATTTTTTTGGTGGGAAAATGAAAAA AGGTTTCAATTTTAGCTTTATCGACTGACCGACCGACCCATTTTTCAAAG CTTCTAGGACACAAACCAAACAATCAATAGACCTTTTCACCTTTCCATCT GCCATATTGAATTGTATGCAAAAATTATGGTGGCCGAATTGCCATGATGT TGTGAGTGCATTGAAAATATGCAATTAACCTATGCAAAAAGAAAGTATTA AAAACTTACATGCATAATTGGCATCATATTGAACGTATTGAAGTGTAATC TTGTAGAAGAAAGATTAAATTTGCTTCTCTTGAAAACTAAAAATAATTAT TTTCGCTCATCTCTTAGAACAACCACTTCAAAAAACCATAACATTAGACA GTCTGTGCCACTAACTCGATCGGGAAGATTCTTCCGAAGTGGGAAGAACC TTCCCAAACGGGAAGAACTTACTCTAATTTTTTCTGCCCGTTTGGGAAGA TTCTTCCTCTTTGGGAAGTTGAAAATTGACTGAATCTTCGGCGAAGCTGT ACGATGACCGGCGAAAGTTGAAACTTTTTGGAGGTGAAAAGGCATCAAAT TTTAAGGTTTTTCACCGAAAGAAAAGTAGACTTTACCGTAGAAATCTTGT TAAATTGTGAAAAAACTGTGTAAACTTCCCAAACGGGAAGTTCCAACCCG ATCGAGTTTTCCTTATTTTCCCAATTTCCCGTTCGGGAAGGTTCTTCCCA TTTCGGAAGAATCTTTCCGATCGAGTTAGTGGCACAGACTGTTAGACATA AACTCAAGCTGAAAAATCACCGGGGAAGGTAAAAAATAATCCTTATTCGG CTGACGGTAAATTATTCTCATGCGAATGGAACCGCCAAATGATCAAATCA AAACATTGATCTGAACCCCCTGATTTTACAGCGGCTTTTACTAATGAGTT GCGCTTGACCTTGTATATCAAAACGAGGGTTTTAATATTTTCTTGCACGG GAAAGAATGTGTGACGTCGTAATTACTGCTTTCAGTTTGCGTGTTTTCAA AGTTTGATGTGTGTACTTCGGGGAATTTTTTAATGGCATGACAACGGAAT ATGCTATGTCTTTAAGAACAAATTTCTTAAAGGTTTTTGTTGTTCTTTTA ATATTTCTTTTTGGATTAAGAAATTCCATCTTTTATTGTTCTAATGATTA TAATATTTCTTTATAAGATGCATTGTTGTCTTTTTAATCTTTGTGTAAAT TTGCATATGTTTTGCATATTTTCCAAATAAATCCAACCATGGCTTTTTCG TTCCTGTATTTTTGCATACAATTCAAGATGGTGGATGGAAAGGCGAAAAA GTCTATTGGGCCTGGCCTATCTTGTATATGGGCGTATATTTATATTTAAA CCATACAGGGGTATTGACGAACTTTTCCAGGGGGTCTGAGCCTTGATTTT CCAAGGGGTTTTTGTTCATTTTTCAGATTTTCCAAGGGGGGTTATTAAAG GTTTCCAGGGGGGTTCTCGCTCTCCTCCTAAACTGACATCAATAGTCATT TTCCCCAGGCCTTATCTAGATTATTTTAGCATTAAAATATATACAGTAAA TTTTCATGAAAAACATTTTCGAAAAATATTTACGAAAAAGTTCCAATTTT AATTATCAGGAAATCATAAGTTACAGATCAAAATGTAACCATGACTAAAA ATGGTGCAAAAACAGTCATTTCTTGTACATTTGATTTGACAGTGTCCTTA AAAACTATGAATTTATAATACTTACAAAAAACAAAAAGTTTGATGCTCAA TTAGTGAAATATTTCAATAAATTCCTAGTTTCAATTTCAGTGGACGTTTT TGAAGCGCTTTGTTAATCGTTCAATTTTTGCGTCACACAAAACTTTCTCA GCTGTTTGTAATAATTATGCATTGTCAAACGTTAATGATGACGTCTCTTA CGTAACACAGCTGCTACCTAGGTACAAGACAATTTATCCAGATTGTACTG GCTGGAGTAATATTCGTTTGGGAGAACACAACAGCCTTTTGAATAACTTA TTACTCAAGCAGAATTTTTTTAATGATAACCTCATAGAATGGATTTATCC TGTTTGTAATACTGGAGTAATTTGTTATTCAATAGACTGTCGTGTTCTCC CAGACGATTATTATTCATCACAAACGAAGTAGCTACATTGGTGGAAAGCT TTCTTGTAAATACCTTTTTATGCTTCAAATGGAATAAAAAAAAAATAGGA GCTTAGCAAATATTTATTTCTCATTTATGAAATAAAAGACCAAAAAAGGT TGTGGTCTGGAAGTTACCCTTGCTTATGAAAGTAACCCCAATCATTGGTA TTTTAGAAACCACAGTTATGTTTATCACATCAAATTTTTCATTTCTAATC ACAGCCTCAATAGCATTACAACTTGGGAATGTGTGATAAAAAAATTGATG GAATTAAAGATAGGATATTTAAGGCCTGTCAACAAGGCCAGTTAGAAGTT TTGAAAGAACTATTAAATTCAACTGATTTGGATCTAGACCATCAGTATGA CAATGGAACTACATGCTTACATGAGGTAGTTATTCATAATTGCCAGTATT ATGATATGGTGAAACTTCTATTAGAACATGGTGCATCAGTTAACATGCAA GACTCTGATGGGAATACACCTTTGCATTCTGCTGTTCTCTTCCACTGTGT AGAAAATGTCAAAGAACTCTTAAAATACAATCCTAATATTTATACAGAAA ATTATGATGGTGCGACTGCTGTTGATTTTGCTAGAAATATCAGTGATGAT GAAGTAGAAAGGCTATTAACTGGGACTGTAATCGCAAAATCAAAAACTAA AAATAGACAAGCTCGAAAAGTTACAAAAAGTGTTAATTCAAAAGTGAAAT CCTTTCTACCCACAACACCTATTATGTCACCCTCCATTCTGAAGAAGAGG AAATTACTCCCAGAACAAGAATCCGTTGAACCACCAGCAAAGCGGTCTTG TGTTCGATTTGCTGATTTACTAGAGGATTGAAAATATTCTTCTTTGGACA TTTTACCTTGTAGATTTTTTTTATGTCCTCATCTTTGTTTTTATTTTTAT CTTATCTTGTGAATAGAAATACTTGTTACACATCTCAAAATAATGATCAA CCATAGTGCATAAATTCTTTAACCTGTCAGGTTCTTATTTTACTTTCAAA TTTTCATTCCATTAATTATTTCTTTTTTTCTTTATTAAAGGCAACTGAAA TGAAAAAGTATGTCATCAAGGGATCATGGTAAGCTTCCCTTAAAAGAAAA GAACTTGCTCGAGCTGAAGAAATGTAGGCGAAAGAAAAAACAGGAGTTCA TATTAGGAGTTATTGTTTTGCTAGTGGTTGATTTCATTTGGGTTGGATCT GCAGAACTAAGTGACTATATATTCAAAGAAAACAAATATGACAAACCTTA CTTTACTACATACTTTAAAACTGTTTTCTTCTCTGTTTATTTGATTGGCT TTTGTTTTGTCAGAAACTGGCAGTACCAGATCAAACAATCTTGTACCAGA GGCCTTCCAACAAAGAAAATGTTGAAAGAAGTTTCAAGAGTTTCACAAGG ACCTCAAAATGAGCATCTAAGGCAGCAAGCCATCTCATGTGAAACATCAG CCACCTCTACACCTGGATATATTACACCACCAAAATTTGAAAACATGACA GATGATGAAATTAGTTTAAATGGTGATAGTCAAAACAAAAAAGTGAAGTT CAATGATGTACGAGAAGTACGTTCGCTTGCGAAACGTCATGCAGAAGCAC AGATTTTGTCAAGAATGTCCCATAACTCTGTTGAAGAGTTGAGAAGCATC TTACTTTCACTTGATCAGAAGCTTCCATTGAAAGAAACTATCAAACTTTC AGTGTATTTTGTTGTGTTGTGGGTTTTCGCTACCTTGGGTTATCAGGCAG CTCTTGCCAATACAACACCATCAGTCGCTAATATCCTGTCAGCCACATCT GGAATTTTCACTCTGTGTTTTGCTGCTTGTTTTCCCTCTTCAAGTGCGGA CTNGGATCATGGTAAGCTTCCCTTAAAAGAAAAGAACTTGCTCGAGCTGA AGAAATGTAGGCGAAAGAAAAAACAGGAGTTCATATTAGGAGTTATTGTT TTGCTAGTGGTTGATTTCATTTGGGTTGGATCTGCAGAACTAAGTGACTA TATATTCAAAGAAAACAAATATGACAAACCTTACTTTACTACATACTTTA AAACTGTTTTCTTCTCTGTTTATTTGATTGGCTTTTGTTTTGTCAGAAAC TGGCAGTACCAGATCAAACAATCTTGTACCAGAGGCCTTCCAACAAAGAA AATGTTGAAAGAAGTTTCAAGAGTTTCACAAGGACCTCAAAATGAGCATC TAAGGCAGCAAGCCATCTCATGTGAAACATCAGCCACCTCTACACCTGGA TATATTACACCACCAAAATTTGAAAACATGACAGATGATGAAATTAGTTT AAATGGTGATAGTCAAAACAAAAAAGTGAAGTTCAATGATGTTCGAGAAG TACGTTCGCTTGCGAAACGTCATGCAGAAGCACAGATTTTGTCAAGAATG TCCCATAACTCTGTTGAAGAGTTGAGAGGCATCTTACTTTCACTTGATCA GAAGCTTCCATTAAAAGAAACTATCAAACTTTCAGTGTATTTTGTTGTGT TGTGGGTTTTCGCTACCTTGGGTTATCAGGCAGCTCTTGCCAATACAACA CCATCAGTCGCTAATATCCTGTCAGCCACATCTGGAATTTTCACTCTGTG TTTTGCTGCTTGTTTTCCCTCTTCAAGTGCGGACTGGTTCAATTTTTCAA AACTGTTGTCAGTACTTGTTAGTTTTGGTGGAGTTTTTATTGTTTGCTGG ACGGACCCTGCAAAGAAAGATTCCACAGTTAATATTGGTGACTTATATGC CATTGGAGGTGCAATACTATACGCTACTTATCTTGTCTTGATTAGAAGAA AAGTTGGCGAGGATCGTAAATTAGACATGCCATTATTCTTTGGCTTTGTT GGACTATTTGGTGCCTTGTTTTTTTGGCCAGGCTTTTTCATTTTACATTA CACTAATGTCGAGAGGTTTGAACTCCCACCAGATCTGAAAACTTGGCTTT TACTGATTCTAAATGCAGCAATTGGAACCCTTCTGTCAGAAATTTTATGG TTGTGGGGTTGCTTTTTAACAAGCTCTTTGTTAGCTACTTTATCGCTTGG TTTGGTTGCACCACTGTCAATGGCGTTTGATATCATTGTACACAAGGTGC AATTTTCATACCTATTTTTTCTGGGAGTTGCACCAATCCTTATTTCCTTT GTTGTTGTAAGCCTTTTGACTCATTACGAGGGCTATGATCCTGTCATGAA TTGTTTTTCAAAGATATTTGGTAATACCAAACAGGAGCCCAACCCTGACG AAAGGGAATCTTTACTTGAAAATGATGCAGTTGCCTGATTTTGGCAAAAT ACAATTCACAGAAGCTGTTCTTTATCTATAATCCCACATCGAAGAGTATA TTGAACCTTACAAAAATTGAAAATAGGAAATCAAATTGTAAATAAATTAA TATCAATTAATGCATTTTGTATTCAGATAATTCCAACAAAACAGGTAATA TATTGTTCTGTTTGGAAAAATTAATAGAAATTCTATAAATATTTTTTTGA TAATAATTCTTTAAACTTTAAGTTTTTCTTTTTGTTATTTTTGTATTTGG TTAATTTAATTTTTTTTTGGGATGCAATTGACTATCTTAATGGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040822XLOC_040822Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065114-exon-scaffold_430-1575043694:83858..84019TCONS_00065114-exon-scaffold_430-1575043694:83858..84019Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1575043694:67542..67579TCONS_00065114-exon-scaffold_430-1575043694:67542..67579Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1575043694:65024..66523TCONS_00065114-exon-scaffold_430-1575043694:65024..66523Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1510915933:83858..84019TCONS_00065114-exon-scaffold_430-1510915933:83858..84019Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1510915933:67542..67579TCONS_00065114-exon-scaffold_430-1510915933:67542..67579Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1510915933:65024..66523TCONS_00065114-exon-scaffold_430-1510915933:65024..66523Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1491911889:83858..84019TCONS_00065114-exon-scaffold_430-1491911889:83858..84019Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1491911889:67542..67579TCONS_00065114-exon-scaffold_430-1491911889:67542..67579Clytia hemisphaericaexon
TCONS_00065114-exon-scaffold_430-1491911889:65024..66523TCONS_00065114-exon-scaffold_430-1491911889:65024..66523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_430supercontigscaffold_430:65024..84019 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.0779633 0 0 0.00702473 0 0.000237375 0 0 0 0 0 0 0 0 0 0 0 0.0206108 0 0.00290567 3.03171e-09 0 0 0.223168 0
Blast
BLAST of TCONS_00065114 vs. Swiss-Prot (Human)
Match: S35F5 (Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.004e-75
Identity = 170/402 (42.29%), Postives = 242/402 (60.20%), Query Frame = 1
Query:  220 KQSCTRGLPTKKMLKEVSRVSQGPQNEHLRQQAISCETSATSTPGYITPPKFENMTDDEI-SLNGDSQN----KKVKFNDVREVRSLAKRHAEAQILSRMSHNSVEELRGILLSLDQKLPLKETIKLSVYFVVLWVFATLGYQAALANTTPSVANILSATSGIFTLCFAACFPSSSADWFNFSKLLSVLVSFGGVFIVCWTDPAKKDSTVNIGDLYAIGGAILYATYLVLIRRKVGEDRKLDMPXXXXXXXXXXXXXXWPGFFILHYTNVERFELPPDLKTWLLLILNAAIGTLLSEILWLWGCFXXXXXXXXXXXXXXXXXSMAFDIIVHKVQFSYLFFLGVAPILISFVVVSLLTHYEGYDPVMNCFSKIFG------NTKQEPNPDER-ESLLENDAVA 1389
            +Q CTRGL  K      +      +         +   S+ S P Y+ P KF ++  ++  S N D++      +V+F+++ E+R L   HA    LSRMS+  V+E   IL ++  KL   +  K+S +F  +W  A L YQ AL++T  ++ NILS+TSG+FTL  AA FPS+S D F  SKLL+V++S GGV +V      K      +G ++++ GA+LYA Y+V+I+RKV  + KLD+P+FFGFVGLF  L  WPGFF+LHYT  E FE P  +   + +I+N  IGT+LSE LWLWGCFLTSSL+ TL+L L  PLS+  D+ + KVQFS+LFF G  P+  SF +V+LL HY  +DPVM    +IF         ++ P   E+ ESL+   +V+
Sbjct:  125 RQQCTRGLRGKH-----AAFFADAEGYFAACTTDTTMNSSLSEPLYV-PVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSY-PVKEQESILKTVG-KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKV-VLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVPEDSEQCESLISMHSVS 517          
The following BLAST results are available for this feature:
BLAST of TCONS_00065114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35F55.004e-7542.29Solute carrier family 35 member F5 OS=Homo sapiens... [more]
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