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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065046 ID=TCONS_00065046|Name=TCONS_00065046|organism=Clytia hemisphaerica|type=transcript|length=783bp
GTTTTGGATACGGCTCACTGGTAGAATCCTACCATAACAAAGCGAAATAT
GTTGAAGTGAATATCAATTATCGAAGAGTGTGGAATGCATGGAACACAAA
AGCACGTGCAACTTTCCTTGGTCTTGAAAAGACAATCGAAAAACATGCAG
TCAACGGAGTGATATATCCCATATATTcacaaaaagaaattgaagatcTC
GACCTTCGTGAACAAGGTTACTCGCGACTCGCCATTCCTCACGAGGACGT
CAAAGTTTTGAACGAAGGCTTAAACGAAACCATGCAAGATATGAAATTAG
ATTCATCTATGCTTTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCG
CCTGAAGCTTGGTTCCCAATTCTACAAAGTTACGTCGATTTATGTGCTAA
TGGATTTTTACGTTTCCGCAAAGAAGAGCAACCACGCGATGCCAGCGACC
CCGTTAGAAGATTCTTGGACACCACTCATAAATGGTCAAAATACATGTTA
AACGATCGTGTTTTAGCACGTCGACCCTGGGTGAGCgagaaaaatcaatt
tgtgattgATGATTACTTAGATGACGAGGATGACGTCAACGATATCCCGG
CCGCTTTGTATCCGACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAA
GAAGGACTTATGACGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAA
TTCGATTTGTCattaacaaaaaagttaaaactttaACTGAAATCATAGGA
CTTTTTAACTTTAGGGCTTGTTTAGATAATGCT Run BLAST on NCBI transcript from alignment at scaffold_428:371131..372752- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065046 ID=TCONS_00065046|Name=TCONS_00065046|organism=Clytia hemisphaerica|type=transcript|length=1622bp|location=Sequence derived from alignment at scaffold_428:371131..372752- (Clytia hemisphaerica)
GTTTTGGATACGGCTCACTGGTAGAATCCTACCATAACAAAGCGAAATAT
GTTGAAGTGAATATCAATTATCGAAGAGTGTGGAATGCATGGAACACAAA
AGCACGTGCAACTTTCCTTGGTCTTGAAAAGACAATCGAAAAACATGCAG
TCAACGGAGTGATATATCCCATATATTCACAAAAAGAAATTGAAGATCTC
GACCTTCGTGAACAAGGTACACATTGCTTTTTATAAGCAACCAGGTTGCT
ATCGAGCTCTGAGATTAGCCTAAACTTTTTTACAACAGTATCTCGTAAAG
TAGAAGCTTCTTAGATAATCTAACCATGGTAAATGATAGTCCTTGACCCA
ATAAGCATAAATATGGTATAATATCAGGGTTGGTCAAAGCAAATTTCCTG
ACCCGAGAATTGGAGTTTCTTATGAAAAAATGTATTTAATTTATAAAATG
ACAGAAAACAGAGGACCACAGCAGGAGAGATGGAGCGAAGGGGTCCAATC
TTAGGAGGGTAAATTGTTTTTGGTTAGACAAAAGATTGTGTTTTTGACAT
TCATTTGAGGGGCAGGAATAGCTTTAATACTAATAGAGACTCAGCGGTTT
TCGTGATGGGGTGATTGACGTTTTTTCAAGTTCGTGATTTTGTGATTGAA
TATTTTTCAAGTGCGTGATTACGTGATAGGAGGAACTAAAATGGTCAACG
TGATCGTGATAGAAAGGAAATTTACTCCTGATAACGTGATTTGGAGTTTT
TTATTGCATGATTTAAAAGGTGACTGGGGGGGGGGCTCTTAATACCATCT
GCTTTCCATTCTATTTGAGAAGATTTTATGGTTAATATGTTTTTACGATT
GTAAAGATTGCCTTGAAAACCTTTATCAATCAAAAGCTCCTGAAATGCAC
GAGAGACACGCCATCATCCTTCTAGATCCGGAGATATCAGCCTTTAAAGT
TTGAACTAGCGACTTTCTTTAAAAAACTTAGAAAAAAATGGCCGTGGCAC
ATTTTTTAAAGGGTTAATCTATACTCATAATGTAATCCTTTGCACTTTCT
TTTAGGTTACTCGCGACTCGCCATTCCTCACGAGGACGTCAAAGTTTTGA
ACGAAGGCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATG
CTTTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTG
GTTCCCAATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTAC
GTTTCCGCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGA
TTCTTGGACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGT
TTTAGCACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGATG
ATTACTTAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTAT
CCGACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTAT
GACGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTC
ATTAACAAAAAAGTTAAAACTTTAACTGAAATCATAGGACTTTTTAACTT
TAGGGCTTGTTTAGATAATGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065046-exon-scaffold_428-1575043694:372537..372752 | TCONS_00065046-exon-scaffold_428-1575043694:372537..372752 | Clytia hemisphaerica | exon |
| TCONS_00065046-exon-scaffold_428-1575043694:371131..371697 | TCONS_00065046-exon-scaffold_428-1575043694:371131..371697 | Clytia hemisphaerica | exon |
| TCONS_00065046-exon-scaffold_428-1510915933:372537..372752 | TCONS_00065046-exon-scaffold_428-1510915933:372537..372752 | Clytia hemisphaerica | exon |
| TCONS_00065046-exon-scaffold_428-1510915933:371131..371697 | TCONS_00065046-exon-scaffold_428-1510915933:371131..371697 | Clytia hemisphaerica | exon |
| TCONS_00065046-exon-scaffold_428-1491911889:372537..372752 | TCONS_00065046-exon-scaffold_428-1491911889:372537..372752 | Clytia hemisphaerica | exon |
| TCONS_00065046-exon-scaffold_428-1491911889:371131..371697 | TCONS_00065046-exon-scaffold_428-1491911889:371131..371697 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:371131..372752 - |
Blast
The following BLAST results are available for this feature:
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