|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065044 ID=TCONS_00065044|Name=TCONS_00065044|organism=Clytia hemisphaerica|type=transcript|length=2797bp
CTTAATGAATGTACACGTGATGTATAGAATGGAGGAATCAATGGTGAGCG
AACAAGGTAAATTGAAACGCCAAGCCATAGGAAAAATACACCAAACAAAC
TATCAAACTTCAAGATTATTGAATTCTACCATGTGATTATAATGGACCAA
CATTCTCCACCTAGTAGTAAGCCACGAATGATAACCAATAACATGCCCGC
CACAACGATTTCAAGACCAGCGCCCACTACTCGTATGAACGCCCCTCGTC
AGCACCCTGGTACAAAAGAAGGGCGGAATTATATGGATATTGACGAATTC
TTCAAAAAGGTCGGCGGGGATACATCGCctaaaagtaaaaattattTGAC
TAAATTCTCAAACATGGTTCCACCTTTATTGAACGCAAGTGATACGTCAT
CGGCCGCAAGGTCCCAAGGTCAGGTCCTTCAAAACGCAAGCCAAGaggaa
aaactaaaacttttatCAGCTTTAtacagaaaaaatgactatCTAGAATC
TCGCAGAAGACATGCAAGTCCCCATGAAAGACGCATGTATTACGAACACG
ATGAAGTATCTCGGTCTGAAGAATCTTTAAAACGTCGTTACGACGAGCAT
GAACGATCACTGACGCAAATATACCGACGAAATCCCAACGACTCTCGGTA
CATAGTGATGCCACCTTTAACGAAAATTTCAAAGGGGCGTGATGATTCAG
ATTTAATACTTCAACGAAAGATCGAGCGAAAATTAAAGGACTCGAAAAAA
GACTCACGACAGGACACAGTCGAGCCGTACATAGATGTCCTAGGTGACCA
ACACGAGTCAGAAATCGGAGATAAACAATCAACTTTGTATCAACGGACTA
ATAGTCTCGATAGACTAGTTAAGTTGGAAGAAAAAGTAGCAAGCACAAAT
CATCGTCCACCAAAAATCGATCATCGGCCGAAAAGTGCCGACATTTTACG
CAAAGATACGGAGTCTAGATCACAGTCGAAAAGTCGGGAAAGAACTGACG
AAGAAGAATGTATACCAAAAGAAAACGAACCGTCTGACCAAAAAGACGCC
ATCGTTGACAGCTTATTGATGGAGCGTTTATGGAAAAACGAACAGCAAAA
GTTGTCGAGTGGCGTAACGACTAACGAAAAACCAGTAAAAAGTCCGGTAA
GTGACATCACAGGAGGGACGGCGAATTCCAGTTTCGACGAGTCTTCCAGA
CATTATGACTCTTCTCATGATTCTGACAGTAGCGGAAAATCAGAAGTTTA
TGATGAATCATACCAGATGAAAACACAAGCAGCGCACGGCCTCATTTCAC
TTAATAGTGGCGGGGTAGCTACAAACACTAATGGAGCGAACGCCTCGGAT
GATAGCGGTGGTGCTGCTAAAGTGAAAAAGCGAGGTGGTGGAAAACCAGG
GCGGCGTCGAAAACGAGGCTATATATACGATCCTAAGCCACTTgtaccaa
aatcaaaaatcaataacCTTCCTGCAGAGCTTAAAGATGAAGAGTATTGG
ACAAGGCGGCAACGTAACAACGAAGCCGCCAAGCGTTCCCGCGAGAACAG
ACGTGTTAAAGAGCTGGAAATGATGACTTTAGTGAAAGATTTGACTGGAA
CAAACACAGAGTTAAGGACAAGAATACAAGAGCTTGAAGTAAGAAACAAA
TTCTTGGAGCAAATTTTGGGTCGACATCCAGCTGGTTTGGATGGGAGTGG
AGGAAGTAACGCCTCGTCCTCAGATTTGTCCTGAAAGGCGGAAGGGCGGA
AGACGAAATGCGGTTAATCGACATTGGCACGAGGTCGTGTCTAATGATCG
GTGATGCTGGCGACAAATTTATTCAAACATATTAAAAAACAACAACCAAA
GAACAGCACAATATTCAAGACACATGCAAGTAACAAAAATCTTTAACATG
TCTTAACTTCTTAACTTTGAGTAATATCGTGAATTATGTCACAAAGATGT
ATGAAATTTCCCAACTGATGGTAGAAGAGACAATCAGATTAGAGTAAAAT
TGACCCATTTTAACAACTCAGACTAATAATCGAGTGAAGTTATACATTAT
TTCGAAGTACGATCTTTAGTTTACATAGCCTGCACACGTAAGGTTCTAGT
TGGTAAAGGCTAAAATATTGGAAACTTAACTGTAACGGATGAGCCCCTCT
TGCATATACTTTTCCTGCACGTCTGACGGCAATTCGCCCTGACCTGTGAA
TAACAACAAATATGCTTTAAAGATCATGACTTAATTTTACTCGGTTTTAC
TCTAATGAATAATATTTTAGGCCAACAACATACCCGTGAAAAGCATTTGA
ACCATTTTAAAAATTACGCATATACTTATCGTATATTTTATATTTCGTAG
GACTAATTATTAAacaaaaggattttcgaaagaTTACGTATATACGTAGA
CGCAAAATTTAGTCCTATCCGTCATCTGCGTGAATACAGAGCATTTTTTT
ATTTGCAATCTTTCATGTATGCATTCATCCATTCgttcattttgttaatt
tttttctgaccaatcttgctccacatccgttttaatctaatgtgaaaaag
ctaaaattgatgagtaagcgaacgatatcactcttattcaaaaacaaaac
ctagTGATTATTAAACAACGATTCGTTTTTTATATACACTTCAATGTATT
TACATTTTCTTTACTTGGGGTACACGTAGGTGACCCTATTTTTATAATGa
agtatttttagttttcttagCAAGCAATACCTCATCGACAAGATTtatta
tgaaagaaaaaataatatttgttgTGACTGATCTCAATTTATCCCCA Run BLAST on NCBI protein sequence of TCONS_00065044-protein >TCONS_00065044-protein ID=TCONS_00065044-protein|Name=TCONS_00065044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=530bp
MDQHSPPSSKPRMITNNMPATTISRPAPTTRMNAPRQHPGTKEGRNYMDI
DEFFKKVGGDTSPKSKNYLTKFSNMVPPLLNASDTSSAARSQGQVLQNAS
QEEKLKLLSALYRKNDYLESRRRHASPHERRMYYEHDEVSRSEESLKRRY
DEHERSLTQIYRRNPNDSRYIVMPPLTKISKGRDDSDLILQRKIERKLKD
SKKDSRQDTVEPYIDVLGDQHESEIGDKQSTLYQRTNSLDRLVKLEEKVA
STNHRPPKIDHRPKSADILRKDTESRSQSKSRERTDEEECIPKENEPSDQ
KDAIVDSLLMERLWKNEQQKLSSGVTTNEKPVKSPVSDITGGTANSSFDE
SSRHYDSSHDSDSSGKSEVYDESYQMKTQAAHGLISLNSGGVATNTNGAN
ASDDSGGAAKVKKRGGGKPGRRRKRGYIYDPKPLVPKSKINNLPAELKDE
EYWTRRQRNNEAAKRSRENRRVKELEMMTLVKDLTGTNTELRTRIQELEV
RNKFLEQILGRHPAGLDGSGGSNASSSDLS Run BLAST on NCBI transcript from alignment at scaffold_428:314254..330489- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065044 ID=TCONS_00065044|Name=TCONS_00065044|organism=Clytia hemisphaerica|type=transcript|length=16236bp|location=Sequence derived from alignment at scaffold_428:314254..330489- (Clytia hemisphaerica)
CTTAATGAATGTACACGTGATGTATAGAATGGAGGAATCAATGGTGAGCG
AACAAGGTAAATTGAAACGCCAAGCCATAGGAAAAATACACCAAACAAAC
TATCAAACTTCAAGATTATTGAATTCTACCATGTGATTATAGTAAGTAGA
ACTGATTTCTAAACAATTTCTATCATTCTTTTGAATTAGTTTCATTCGGG
ACGGGTCTGGGAAGTCAGAATATCATTTCATTTAACTTTCCAACTTACAT
AAATATAGCCGGGTAAAGGTTATGTTATACAACTTAATAAACTTTTTACT
ATATAAAGCGAACACGATATGTTGTAAAAGTTCACATATTGATCATTCAC
TTTTCTAAAGATTGCGGGGAGGTCATGAGAGGGGCTATGGGAAAGGGGAA
GTAAAATGTAGCCAAAAATCATTTTTGAGCGATCTCCTAAGAGCATAAAA
ACACAATGTTTTGCGAAGTTCATGTTTTTTATAGCGCAACTGGAGGATTA
TTTGAATGATTTCGAAATAAATCCGCAGAATTCGTATTTTTATTTGAGAT
TGGATCTAGGAAAGCTTTATATCCTTATATGAGAGTGCATTTATTTTCAT
AAAGTTATTATACAAAACACAAAAATTTCTTCTAACGATTATAAGTGATA
TCGCACACGTTTTTTATTCTCGATAAATTGAAATTCGCTAAGAAACGAAA
TGAAATAGAGCTATTTTGTACTTTATACATTTTTCATATCTATAGAATTT
AAAGGAGCGGGCGCTACAATTTTCCTGTAATTTTCCTATGATGGTACATC
ATCATAATTTTCCCATGATGCAAAACTCTTTTTCGCCCTTTTTCTCTATA
ACTCGATTTAAACCCACACACCCACAGTACAAGCTTTTTTAAAGGAATAC
TTTATAAGGATATTCTTGATGAAATTGGTCAGAAAATTAAAAATTTGCTA
AGAATATCATCAGCATGGAATTTGATAATTGAACCTAAGAATGCCAAATT
TAGAGCTTGTTTTTACTGTATGTTGTTAATTATCCCCCAGTAAGGTTCAA
TATAATTTTACAACAATGCCATTTTATGCTTCAAGTGTCTATTACATGTA
AAATTTTGGTTGAATGTAACCTAAGAATACCGTAAGAATACTTTAGGATG
ATATTTTCCGAAAATCGATGATGAAATGAAAAAAACACCATTTTTATATA
CAAAAAGGATTCTGAATTTGAATAAGGTTGAGGGCAGTAGCGTAGTGGCA
GCAGCCGATTTTTTTGGAGGGCGCCGAAATACAAAGGACGCAAAAAGACG
CCTCTGATGACTAATTTCGTGACTTTCCTGTGAGGAGCAGGCTTAACTAG
TCTATAATAAATAAGGTGTTTCTAGAGCTTGTCCCCTGTCAAAGCGTCCA
TTTAGCTAGACCTTTACAAAGTCATTGAGTTTTCTCGTATTTTTAAAATT
CAGGAAGCACAAAATTTTTTCTTAGTCTTTCTTAGGATGTGTGTCATATC
TTACTTCGTTTTGAGCGTAAAACTGCTACCCTCAAGAGTACACGTTTTTT
TTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTCGGATGTTCTTAGTTT
TTTGGATTTGAAGCCCAAAAATGTTCTTAAAATGTTCTTATTTTCAGCAT
TTTGTGAGCATTTTGATGTAATTTCTTAAGAAATTGACCTACGNTTATTT
TCAGCATTTTTTGAGCATTTTGATGTAATTTCTTAAGAAAATGCATGTTT
TTAAGTCTCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAAGTCTCCAAAGCCTTAGAATGTTCTTAGAATGTTCTTAAATT
TTTGGGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAA
AACGTGTAGTAAGACCTATAGCCCTCCCAGTTGGCACACAACATTTTCTT
CAATGTTTATCTAACGTTCACGCTTTATTGTATAAGAATGGTTTAAATCC
ATTTCATCATGGATATTCTTAACTTTTTTGGGAAAATCATCATAAAATAT
TCTTACAGCATTCTTAGGTTAGGATCCTAATTCAGACTAGATTTAACATT
TAGTACATACGTCTCATTACGCCTTACTTTGGGGTAATTGGCAATCTATA
ACTGAAAATGCTCTAAAAATGGCATTCTTAGCTTGAGTAGCCAAATTCCA
CGATTTCATCATGGACATTCTTATAAAAAAGTGTATTCTTATAAAAATAG
CGTGTAATGTTAGACGAACGTTAAATTAACGTTGTGTGCTAGCCTATTTT
GTAGACTAAGTCTATCCCTCCATTCAAAAGTTGTTTTGACGCACGTCAAT
TATAAAGAAGCGATAATTGCTATGCGACTTTTGACGTGGGGAGTATAGAA
AACATAAGCGTATTTACGTCTAAAAATGAAGATTTAATTAAAGTGGTTAA
TTTTATATGTTAATTCAGCATGTCATTCATACGAGAGTTCCCTTAAAAAT
ATTGGGTAAAAAAGGCGCCTCAAATTACTAATGTTGGCGCAACTTTGCCA
ACTTTTTTTACACCATAATATCAAAAGCTTTTAGCTAAAAAGAGAAAAAT
ACCCAAAAATTGTCATTCTTGTTTCGCTTACATCAATTTTACAAAGACAT
TTTACTATTGAAAGGGGGCGCAAATATCTCAACTTTCAAAAATTGCCTCC
CCAGCTTTGTTCGACCCACCAGCTTGAGCCTCTCCATTTTTGAGCACTCG
AATTCCTAGTGAATTTTATCTTATATTAGCCTTCAACCTTCCCTTTTTTA
CGGTTGTTCCACCGGGCTTGGCTACGCTACTGACAAAAGCGTGTGTTTGT
TAGAAAAGAGTACCACCAGGTCTGTGAGACATGGGTAAACAAGTAACAAA
AGGATAGAAAATATCCATTTTGTTAGGATTATGTCGGGGTAGACATTAAA
TTGCTGAGTTTTGAAGTGATTCAACAATTACTTTACTAAAAGTCAAGCGA
TGGTGATCAATGCTGCTATCCTTACATAACTCCGACATAACTTTACAAAA
CCAACACACACAGCCTTAGATTGTAAAAAAAGATTGTCCTATTACGTGGT
TATTATGCCGGACCAAATTTCGTGACATCGACATCAATTATACATCAGTG
ACTGACCCTTGAAGAGGTAGCAACAATTCATGGCATGTTTATTCACTCAG
ATGTGTGAGAGTGATCAATGTTTTAAGTTTTGCATACCTTGAATACACGT
TTTTCTTAGGGCACGTTTATTTATGTTGTACACAACGAATGACACAAATT
ACTCTTATCGTGTGTGCTGTCGTTTAAAACCATGATGTACACGTTTTTTT
TTATATAAGAACATGGCCAAAAATATTAGGAAAAAGTTAAGAACATTTTA
AGGCTTTATGAGCTCTAAAATGGCCAATTTCTAAAGAAAATGGACAACAA
TACTTTCAAAATGGTGAAAATAAGAACATGTTAAGAACATTTTTAGGCTT
AAAACCCAAAAAGTACATCCGAAGGCTTCAAAAATTTTGGATGTTCTTAT
AAAAAAACGTGTATAGAACAAGGTTAAAGACATCTAAAGGCTTCAAAAAC
TTCGGATGTTCTTATAAAAAAACGTGTATAGAACAAGGTTAAAGACATCT
AAAGGCTTCAAAAACTTCGGATGTTCTTATAAAAAAAACATGTACACGTT
CTCTTAACAAGAGTGGGAATGGAAATTACATCATCCCATGGGGTACGTAG
TAGGGACAATAGATGACAGATTAGGTTTATTTTGTGATTTTGTAGTCTCC
GCCACTTCAATTATTCGTTTTAAACCTGGTGGATGAGAATTGGTAGAGCA
GCTGGCTTTCTTTTAGATTGTTGCGTGAACTGGTGAGATTTGTTTAAGCT
GAAAATTTAGTGAAATTTCTTCACACTGATGACCTCCTAAGATCAAAAAA
TCTCTCCAGTTAAAATGAAAGTTATAGCACTTTTCTGCAAGATCTTCATT
TTCTTCTTCTTTATTTTCATCTTCGTTTTTAGAAATTTTTCAAAGATTTT
TTTATTTCAAAATGTTCCACTCACTTATATCTTTCCAACTATACCATATC
TATAAAAATTGAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGT
GCACACTTATCGTGAATAGACTTTAATACACCCCCTTCTCACAGACCCTT
TGGGACAGCTTTCCAGTGGAAGAATTGGCCCAAATATCGTCCCCAGTGGA
AAATTGTACACTAATTTTTGTCCCAGCTTAATATAATCTGATAAGCAAAT
TCTCACTGCAAAATATTGTGCTATTTTTCCCATTCCCAATGAATTTTATT
TTCTGGCTCGAAAACAATTTAGTTCCAATCCATAAAAAAATGGGAATATC
AATCAATCCACAACATCGAGATTTCAGGCCGTTGATTTCACCCCCACTAT
CTGAAGAATCTTACCAGGTCTGTGAGAAGGGGGTGTGCCAAAGGCACAAC
GCACCAAATCTATAAATAGTAACAAATAATCTGCACAAAATTTATTAGTT
TGTACAACTTAAGATCCCATCCTCCTTTGCGTTAATTGCTTTTACACGTT
AATTAATTACAATTTCAAACAAAAACGAATTTTCTGACCCGGCCGCAGAC
TGTGGGTTCGTCTATATGGTTCAACATAAAGAAAATCAAGTTGACTGTTC
AAACTATCAAACGTCGTTTGCCTAGCTATTCCCGCTTTTAAATCAAGTTT
TGTTCGTTAGTAGTTAATACATTATTATTCAGGGCTTACTTCATACTATT
TGTACATAAAAGTTATCTTTAAAGTTTTATTTCAATGATCTTAAGAGCTC
TGGTCATAGTGAAAAATCAATTTCAGAATTTGAAGATAAAACCTTATGTT
TTCGCTTCTTTCTACTGCTTTTAAAAAGAAAATGAATTTAAGACGAAATC
ATTTTGACTTCAGAAATGAGCAGCAAAAGCATTACGCTATGACTCCAAAA
CATTACATAATCTTAGTGACCAATAAAGATAAAATTTAAGGGCTAGAAAT
TGATACGCTATAGGTTATCCAGACGCTAAGAATATTTAATGTTTTAATGA
GTCATTACGCAATGTTAAAAATCTTCGTGTCGATTTTTCTTGTTCAGGGA
GGGTCCGCTCACTAACTTGTGTCTGTGACTTGGCAGTACTACATAGTCAA
TAAATTTTATGAATTTCACTTAAATTAATAAGAATATCGAAACTTATGAA
AAATATGATAAACATAAGTTTTTGATAAAATTCACTTTCCAGGTCTTGCT
TAAGATTGAGTAGTTTCAAACTAACTGTCGAGTTTAGTACGTATTTTTGT
TCCCTATACTGTTAACCGTTGGACTTTTTCCTTGAGGATATTGGCAAATT
CTAACCAAACCTCGACCAAATCTCGTTGTTTGCGGAAAAGTATAACCAAT
TATTGTCCCAAGTTTCCTCATTATTTTTAATGTATAATGTCTTCTCACCG
TTTTTTTGCCAATAAAAAAGGGTCATTTTAGTCAAAATATACAAGGACAA
AAATAATTTTAAATAATTAAATTAATAAATTTAGTACGAATATAACGTTT
CTGTAGAAGCCTTTGAGCTTATTACCATCCTGCTTCAATGACAATTAAGG
GTCCATTTCATTTCATTTTTAATTTAAGCCACTGTACATTTTCGAAATTA
ATTTTTCTACAAATTGGAAAATTAAGTAAAAAAATTACCTTCCTGCCCTT
TTCAAAATTACATTAAGGGAACTTATTTTTGCGAGGGTTAATTTTGGCAA
GTAGCAAAAATCTTGAAATTTTTTAATATTGGCGAGAACTTATTTTGGCG
AATGACAGTCTAATCTGTTCTATTTTGTCTTATTTTGAGCAATTTTGATG
AATTGAATGAATTTTAATGGCTATTTTGGCAAAATACCCAAAAATAATTA
TTTTGGCGAGTGAGTAAAATATTTACTAGTAGTTTTGTCTAAATTCGCAA
AAAATATGTTCTCGCCAAATTCGCAAAAAATATGTTCTCGCCAAATTCGC
AAAAATTTGTTCTCGCCAAAAAGTTCCCTAGGACCTTTGGGAGCCCTTAC
AGGCCCTTAGGAAAATTAAGAAAAATATCTCCTCTACATGAAATTTCTCG
AGTACTTCAGTTCGGAAATCCATCCAACTTAAAAATAGTGGGGAAGCACG
ATTACACAATTATAAAATATGTTGCGTGACCTATGGTAAGGTGTATTCAA
AATAACCTTCCCCTTCCTATCCTTTCAAAAATTACATTAAGGGAACTTAT
TTCGGCGAGGGCTAATGTTGGCAAGCAGCAAAAATCTTGAAGATTTTTAA
TATTGGCGAGAACTTATTTTGGCGAATGAATTGAATGAATTTTAATGGTT
ATTTTGGGAAAATACCCAAAAATGATTATTTTGGCGATTGAGTTAAATAT
TTAATTTTGGCGAGAACTAATTTTTGGCAAATTTTGTCTAAATTTGCAAA
AATTTATTCTCGTCAAATTCACCAAAATGTTTTCGTCAAAAAGTTCCCTA
GGACGTTTGGGAGCCCTTACAGGCCCTTAGGAAAATTCAGAAAAATATCT
CTTTTGCATGCAATTCTTCGAGTACCTCAGTTCGGAAATCCATCCAACTT
AAAAATAGTGGGGAAGCGCGATTACACAATTATAAAATATTATTGGGAAA
CTCGAAACCTGTTTTTGATTTTTTGGATATTTTGAAATTTTCCTTTATTT
TTGCACATTTTTTAAAAATTTTAACCGTAAGATTGGTTGGTTGATTTTAC
TGATATCTTTTAATTTTTTGGAATGAGATTTTTTTCAATTTTTCAAATTC
TTTTATTTTGATTTTTTGAATTTTTAAAACTTTGCTACTGAATTTTAGTT
CTTTTTGGGTGATTTATACAACCGAAAGAGATCTCAGGGAATCACATTCG
GTTTGTAATGTTTTTGCACGCAGACCTCTTGTTGTGACGGCTTAAGGAAT
TGTTCAGAAGTATGAGTGAATTTTCCATTGATTTGACNAGTTTGTAATGT
TTTTGCACACAGACCGCTTGTTGTGACGGCTTAAGAAATTATTCAGAAGT
ATGAGTGAATTTTCCATTGATTTGACGACTGGGGGAATTATGAAAGAACA
TAAATGTTAAGGACAATTTAAAGAACATTCTAAGGCTTGGTAAACTCTAA
AATAGCCAATTCTTAAGAAAATGGACAAAAGTGCTCACAAAATGGTGAAA
ATGAGAACATCTTAAGAACATTTTTAGGCTTAAAACTCAAAAAGTTAAGA
ACATCCGAAGGCTTCAAAAATTTTGAATGTTCTCATAAAAAACGTGTACT
ACCATAAATAAAGAAAAGCGAAGAAAAGAAAGCTCAACCCAAATTACACA
ATTATAATTAAGAAAACACTCCTACAGTCTTCTACGACCTCTCAGCGTAT
CCTCGTTTCTTATGCAGGCAACAAGAGGCCATGGTTGTAGTACGTATAAA
TCCAAAAATATCTGCAAATCACAAGCATGGGAAATCCCCAGCAAATACGT
AACTATGTTATAAATATTGATGTTTTACCATGTTTTACTCTCTCATTTAC
TCCGTTCTACTACTTTAAATCTTGCTAGCTTTCATATTTTTTGACTTGTA
GGACAGTTTAAGATAGAATTACTGTAAGAATCAGGTTATGGATTGGAAAA
AAACTTTCTTTGACCTCTGAGCAATATGAAGGCATAAAAACATATGAAGG
TTATGCTCAAACAAAAGAACTGAAACATTAAACAGTTTACTTGCAAACTC
TTCTTGGGTCTTGGTAACATTTTCTGTATAAGTAACTTTCAAGTTCCTAT
TTGTAAACGTTCTTATAGAAACCCAGGGGAATCACCTTGAGCTGTTGTTG
AGCGTGGTTGAGCGTAAGAGAAAATGTACCAAAATCTTTTTATAAGCATT
TTGGTTGAAACACAAAGACTATTTCCAGTAACGTCTGAAATTTTTTTGTT
TTATTGATTCGACATTTGACCCAGCATGAAAAACATGAAAAATTAAAAAA
TTAGAAAAATTTAAGTAAAGAAATTAAGATTGAAATATCATTATTATATT
CTCACGCGAAATGGACAATTTGTTTGTATAGAATAGTTCTTAAAACGTTA
ACATACTTATGGCAATTAACGAAAAATACACGATCAAACCAATCCTCCCT
TTCACTTTACAAATCTCAATTTATTACACTAAATTACACCATTAAATAAC
AGTTGCCACGTTTCCAAAGTAATGCTATGACAACTTATTCCAAACGGAAC
TTATGAAATGTCTATAAACTCGAACCCAGTAATCTACGACTTTTAACCCT
TAGACCACGAGGGACGCGTATATGCGTCCATAACAAGCCAAAATACTTGA
GACTTCAGACTTGAGACCATAGCTCCTGACCACTTGATTCAAAGGGGCAT
AAGCCGAATGCTTATAGAAAGAGTACAAAAATAGCTTTCTAATAGTATCA
AAACAATTGTCTAAGTCAAAAGCTACAAGCTTTTATGGCAGTTTAAAAGT
TTTGAGGTTAAAAAAAAAAACCAATTTCTTCAAAAAAAACAGTGCGCACA
AAGGGTAAAACATGTCCTCGGCTATAAGTGAACGAAATTTTTGGAGGTGT
AAAGACACGAACCAAGAACCCCTGCTTTGTAGCGCCCAAGCCTTAGAACA
ATACATCCCTGTGTCACAGAGCCGATGGGACCCCCGACCCACTGGAAAAT
CTGGCAGAAATTTCGTCCCGGGTGATAAAAGTACCTTACAATTACACGGT
TTTTTTTTATTAGAACCCAGTTTATAAGAACATTGAGGCTGAAATTCGTC
GAAAAATTAAGAACATCGTAAGAACATGCCCAGCCTCAGTTTGGAAAAAA
ATGACAAGAAACTGCAATTGTTTTCTCTTTTCAAGCAGTTTTAACAGAAC
TTAGGCATGGATTTTCTATAATCGGGAGTCAAATATTGTCCAAATTTTAC
AAATTTTAAGTGCTTTAAGAACATTTCGGGCTGAAAATTGCTGAAAAAAT
AAGCACATCCAGGCTCAGAGAGGCTCTATCTTACAATTCGTGCATTACTA
AAAATAGACAAAAAGAACGACAAATTTCATAAAAAAACGACTAAAAATTT
CATATTTTGCCGTCCACAACCCCGACCGAAAGGAGGCCCGGAAAATCCGA
GTTACAAAAACTCGAGTTACAAAAACCCAAGTTACAAAAACCCGAGTTAC
GACGAATGTGACGTCACAAGTCTCAAATTATGACGACANGGCCCGGAAAA
CCCGAGTTACAAAAACTCGAGTTACAAAAACCCAAGTTACAAAAACCCGA
GTTACGACGAATGTGACGTCACAAGTCTCAAATTATGACGACATAAGTGG
GCTTTTTAACTCGAAAAAGTTTTTTACTGTTGTTTTGTAACTCGAAATAT
TTTCTTCAAATTTAGTTTTCGAGTTACGTAACTTGAAATTGTAGTACATT
ATTTGAACTTTCGAGTTATCTTCAGGTGAAACCAAGTCGGCCAAAAATTC
TAGAATTCATATTATTAATAAATATACACCATTTCTTTCGAGAGAAGAAT
CAATAGATCTGATTAGAATAGAATCTTATTTTAAAGCGGAAATGATTGAA
CAGCGTCAAAAGATCTAATTTACAAAACAATAATTATAATAGAATAAAAG
AGCAGGCGTCATAAACATGATTTTGAAGTGATATGATAAGATGCGAGTTG
CGAGGTACGAGTTACGAGTTGTATTTAAAACCTAAAACTCTAAATCGCAA
CTCGCATATGAAAAATCCTCATTTTGAACAATCAGAAAATATTTCAAGCA
ACCTTCTAAACATTTATTTTAACGATTACAATTCATTACCTTATCGGGGA
AAACTTCGTCGGGGAAAACTTTCGTCGGGGAAAAATTCGTCACTTGCTGG
TAGTTGGTAAACTACCGGCCGGGGAAAATAAAGGCCGGGGAAAATTTTCG
TCGGGGAAAATTTTAGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGG
TATATTACTTTTGTACATTGCGCAATTGAGAATCTTTTCAACGAAATATG
TGTTGTGTTTTTTATAAGAACATCTAAAAATTCGAAGCCTTCGGATCTTT
AGCGTTTTTAAAATTTTCTTAAAATGTTCCTATTTCACTATTAGCATTAG
GTGAGTATTTTAAGAAATGTTCTTAACTTATTGTTACTAATTTAGCCCTC
AAAACCTTCTGTTCTCGTATGGTTTATTCTTAAAAAATTTGTGAAAAACC
TAAAGAAACTACAAGTTCTACCGAAGTTTTTAGCTTTTAACGAAAGGACA
ATGAATTTGAATTTAACCAATATAGATTGTGGAATACAAAATGTATTTCG
AATCTTTTAGATTTTAGTCTACTTCATTCACCCAACAAAATCTTCAGAAA
TTCACATCAAAATAGAGGTATATAAGTTTCAAGAAAATTACTAGATCAAA
AACTCCATTCGTAAACAAAAAGAAAAAAAAGCGCTTTTTAGAATTTTTGG
CCAACTTGGTTGCACTTTAACATAACTCGAGTTACATAACTCTAAAACAA
AATTTTTAAAAAATATTTCGAGTTCAAAACAGCAGTAAAAAACTTTTTCG
AGTTAAGAAGTCCTCTTATGACCTCATAATTTGAGACTTATGATGTCACA
TTCGTCGTAACTCGGGTTTTTGTAACTCGGGTTTTCCGGGTCTCCGACCG
AAAGTGACTGTACCACCCCTAGTGATTCATTTCTCTTTGTTTATCACGGG
AAAGAAAGCACGCTTAAACATTTTTATAAGAACAAACTATATAAGAACAT
AAGGCTCTGATGGCCAAAATGCTAAGAACATTTTAAGGCTTCACAGACTC
AAAACGGCCAATTTATTAGGAAAATGGACAAAGTTAAGAACATTTGAAAG
CTTCAAAAATTTTGGATGTTCTTATAAAAAACTTGATGGTGAACAGACCA
ATAAATTTCTATGCAGGCTTACCTAAATAAGTCATTTGAAAGCCAAGTGA
GATTTAATTAAGAGTATTTTTCCTCTCTCTCTCTCTTACTTATAGCCTGT
CTAATGATAGCTGGGAGACCCGTCTACTCTGTTCGTGTGGTTTCGAAGTA
TAGCATTTAGTTAAAACGAATAATAAGGTAGAAATCTCGATAGAAATAAC
AGAGTGGCCGGGTATTTTTGTAGATGCCAAATCTGTCCGCAGAATTCTAT
TGGCTGTTAAACAATTGTTGAAATCACGATATTATTGTTTTGATTGGAAG
TGCGCAAATCTGATTGGCTAACCTTGTCAACGGCTTTTTTGGCACAAAAT
TCAAACCAAATGTAAACAAATTCAAATTGGGCCAAAAATACCATACTCTC
AATGAGTAGCTTTTGATGGGATTTTTGCTTATGTGTTCTAAGTTTGAATA
GAGAGTATGGATCTCCAGACTAGTCTAATGACATCGTCGATAATCACCTC
AAAAACATACTCTTAATATTATTATTAATTTATTATTAATTTAATTAGTA
AAGCAGGTCAGCTTCTATATACAAAACTATATACAATTATACACAATTCT
GTACATATTGGCAGTAAAAAACTGATGTGGACCTAATAATCTCACTCAAA
GATTTAATCACCTTTTGAACCCAACCTGTAAAATTGTTGTAATTATGTGC
GGTTGAAAGCCAAAACCCATTCTTCGCCACGGCTTGACGTCAGAACTGGG
GTACAACAGAACACTTACTATAAAGATTAATTATGTGTTTTCAGTAGACA
TAATCTTTTAGTTGAGTTAAACTATAGTGCTTGTTTTACCCTCGAAATTA
TTAAACCATTAGTCGGACTAGAGCTATTTAAAAAAAATAAGTTTGCAGAC
GTCAGCTTATTTTTTACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATA
TATTACCTCTGAAGACCAATTTTAATTATGGAAATGTCACTTTAATTGAA
TCGAAATAATAGACAGACTTTATGTTATGATTCTCTATCACTGACTCTTT
TAAAAAAGCATTGATGATATTTTTGAGTTGTGTTTTCAACGGCGGGAATA
AAAATATCAGCTTTGAACTTCATCCAAGATCTTGGATGGTCGTCATGGTT
ACTTTTGTCTTCGTTGATTGCGCGCTGAATAGAATCTCGATTGGTCGGCA
CAGGTCAATATATGATATCGGCCTGTGACAAAAGTAACCATGACGACAAT
CCAAGATCTTGGATGAAGTTGATATTTTTATTCCCCTCGTTGAAAACACA
ACCTAAAAAAGTCATCAATGCTTTGTAAAAAGAGTCAGTGATAGGAAATC
ATAACATAAAGTCTGTCTATTATTTCGATTCAATTAAAGTGACATTTCCA
TAATCAAAAGTTCAGTAATTACTGTTGTACATTTGGGGATCATGTAAAAG
ATTTCTTTCGAAAAAAATAATTTCAATTACACTTGGAGGTTTCTAGGGAA
TTCGTAAATAGTAAACTGCATACTGATACAGTCTGCTAGACATTTATATG
GTAATCCAAAGTACACTATTCTTATAAAAAAAAGTGTTTACGCTTTTTCG
ATCGCAGTCGTGCGGATACTTAATTACCCCCTAAACTACATCCAATCTTT
TTTGACACCTTTTTCTTTTGTATTTAAAGTGGGAAAAAACTCGGAAAGAA
TAACCGACGCCTTTAGGGTGATAAACAGATAAAGGGTGCCTATACGTGTA
TTTTTCATATTTAATTTGCAAATGGGGATGAAAACAAATTCAGTTTTTTA
GTTGGGCTAAAATCATAGGGGTATTTCTCAAACCGTGGGGAAGATTTTGG
CCAATTTTCCGATTGTGGCGAGGGCGGGTGTTCCACCGGGGCTGTGAGGC
AGGGGCGTTACTTGATATGGCTTAGATCCCTTTCCTCCTTACTGGGGCTT
AGAGTTTGTTTGGTTTCAAATGGCATAAAATAAGACAATCTTTCTCAAAG
TCTTACGTCAACTATAGACGAGGTCTCGGGGAGCCTGAGTCTTCGTAAAA
TGGAATTGAGTACCAGTCTTTCGCAATTGGTTGAACACACATCTGACAAA
TAGAAATAACAATGGCTAATCATTTCAACCCTTTCAAAATGTGGACCAGT
GTTAACATATAGTTAACATGGAAGTTGCAGCCTTTTAAAGATATTTAGGT
TTCGTGCAATAAAATAGAAAAATTAGCTCCAAAAATAGTACATAGTTTCC
CCATGTTCCGGCAGTTTACCCTTTTTGGACAAGAAAGGTGTTATTATTTT
TCCAAATTGAACCATCTACTCTTGGTAGGATAAAATTTTTATATGTCCGT
CCGAAATTTAGCATTTTTAATCCTCTTAAAAATTACTTCTACAGTGTTCT
ACCCAAACAACGTTGTTTCAACGTTCATCTAACATTATATGGACGTTTTG
AACATTAAAATGACGTTGAAAGAACGTTGTGTGCCAGCTGGGACACTTTT
TCTTTATTTCCATTTTCTTTTTCCTTTCAGATGGACCAACATTCTCCACC
TAGTAGTAAGCCACGAATGATAACCAATAACATGCCCGCCACAACGATTT
CAAGACCAGCGCCCACTACTCGTATGAACGCCCCTCGTCAGCACCCTGGT
ACAAAAGAAGGGCGGAATTATATGGATATTGACGAATTCTTCAAAAAGGT
CGGCGGGGATACATCGCCTAAAAGTAAAAATTATTTGACTAAATTCTCAA
ACATGGTTCCACCTTTATTGAACGCAAGTGATACGTCATCGGCCGCAAGG
TCCCAAGGTCAGGTCCTTCAAAACGCAAGCCAAGAGGAAAAACTAAAACT
TTTATCAGCTTTATACAGAAAAAATGACTATCTAGAATCTCGCAGAAGAC
ATGCAAGTCCCCATGAAAGACGCATGTATTACGAACACGATGAAGTATCT
CGGTCTGAAGAATCTTTAAAACGTCGTTACGACGAGCATGAACGATCACT
GACGCAAATATACCGACGAAATCCCAACGACTCTCGGTACATAGTGATGC
CACCTTTAACGAAAATTTCAAAGGGGCGTGATGATTCAGATTTAATACTT
CAACGAAAGATCGAGCGAAAATTAAAGGACTCGAAAAAAGACTCACGACA
GGACACAGTCGAGCCGTACATAGATGTCCTAGGTGACCAACACGAGTCAG
AAATCGGAGATAAACAATCAACTTTGTATCAACGGACTAATAGTCTCGAT
AGACTAGTTAAGTTGGAAGAAAAAGTAGCAAGCACAAATCATCGTCCACC
AAAAATCGATCATCGGCCGAAAAGTGCCGACATTTTACGCAAAGATACGG
AGTCTAGATCACAGTCGAAAAGTCGGGAAAGAACTGACGAAGAAGAATGT
ATACCAAAAGAAAACGAACCGTCTGACCAAAAAGACGCCATCGTTGACAG
CTTATTGATGGAGCGTTTATGGAAAAACGAACAGCAAAAGTTGTCGAGTG
GCGTAACGACTAACGAAAAACCAGTAAAAAGTCCGGTAAGTGACATCACA
GGAGGGACGGCGAATTCCAGTTTCGACGAGTCTTCCAGACATTATGACTC
TTCTCATGATTCTGACAGTAGCGGAAAATCAGAAGTTTATGATGAATCAT
ACCAGATGAAAACACAAGCAGCGCACGGCCTCATTTCACTTAATAGTGGC
GGGGTAGCTACAAACACTAATGGAGCGAACGCCTCGGATGATAGCGGTGG
TGCTGCTAAAGTGAAAAAGCGAGGTGGTGGAAAACCAGGGCGGCGTCGAA
AACGAGGCTATATATACGATCCTAAGCCACTTGTACCAAAATCAAAAATC
AATAACCTTCCTGCAGAGCTTAAAGATGAAGAGTATTGGACAAGGCGGCA
ACGTAACAACGAAGCCGCCAAGCGTTCCCGCGAGAACAGACGTGTTAAAG
AGCTGGAAATGATGACTTTAGTGAAAGATTTGACTGGAACAAACACAGAG
TTAAGGACAAGAATACAAGAGCTTGAAGTAAGAAACAAATTCTTGGAGCA
AATTTTGGGTCGACATCCAGCTGGTTTGGATGGGAGTGGAGGAAGTAACG
CCTCGTCCTCAGATTTGTCCTGAAAGGCGGAAGGGCGGAAGACGAAATGC
GGTTAATCGACATTGGCACGAGGTCGTGTCTAATGATCGGTGATGCTGGC
GACAAATTTATTCAAACATATTAAAAAACAACAACCAAAGAACAGCACAA
TATTCAAGACACATGCAAGTAACAAAAATCTTTAACATGTCTTAACTTCT
TAACTTTGAGTAATATCGTGAATTATGTCACAAAGATGTATGAAATTTCC
CAACTGATGGTAGAAGAGACAATCAGATTAGAGTAAAATTGACCCATTTT
AACAACTCAGACTAATAATCGAGTGAAGTTATACATTATTTCGAAGTACG
ATCTTTAGTTTACATAGCCTGCACACGTAAGGTTCTAGTTGGTAAAGGCT
AAAATATTGGAAACTTAACTGTAACGGATGAGCCCCTCTTGCATATACTT
TTCCTGCACGTCTGACGGCAATTCGCCCTGACCTGTGAATAACAACAAAT
ATGCTTTAAAGATCATGACTTAATTTTACTCGGTTTTACTCTAATGAATA
ATATTTTAGGCCAACAACATACCCGTGAAAAGCATTTGAACCATTTTAAA
AATTACGCATATACTTATCGTATATTTTATATTTCGTAGGACTAATTATT
AAACAAAAGGATTTTCGAAAGATTACGTATATACGTAGACGCAAAATTTA
GTCCTATCCGTCATCTGCGTGAATACAGAGCATTTTTTTATTTGCAATCT
TTCATGTATGCATTCATCCATTCGTTCATTTTGTTAATTTTTTTCTGACC
AATCTTGCTCCACATCCGTTTTAATCTAATGTGAAAAAGCTAAAATTGAT
GAGTAAGCGAACGATATCACTCTTATTCAAAAACAAAACCTAGTGATTAT
TAAACAACGATTCGTTTTTTATATACACTTCAATGTATTTACATTTTCTT
TACTTGGGGTACACGTAGGTGACCCTATTTTTATAATGAAGTATTTTTAG
TTTTCTTAGCAAGCAATACCTCATCGACAAGATTTATTATGAAAGAAAAA
ATAATATTTGTTGTGACTGATCTCAATTTATCCCCA Coding sequence (CDS) from alignment at scaffold_428:314254..330489- >TCONS_00065044 ID=TCONS_00065044|Name=TCONS_00065044|organism=Clytia hemisphaerica|type=CDS|length=1593bp|location=Sequence derived from alignment at scaffold_428:314254..330489- (Clytia hemisphaerica)
ATGGACCAACATTCTCCACCTAGTAGTAAGCCACGAATGATAACCAATAA
CATGCCCGCCACAACGATTTCAAGACCAGCGCCCACTACTCGTATGAACG
CCCCTCGTCAGCACCCTGGTACAAAAGAAGGGCGGAATTATATGGATATT
GACGAATTCTTCAAAAAGGTCGGCGGGGATACATCGCCTAAAAGTAAAAA
TTATTTGACTAAATTCTCAAACATGGTTCCACCTTTATTGAACGCAAGTG
ATACGTCATCGGCCGCAAGGTCCCAAGGTCAGGTCCTTCAAAACGCAAGC
CAAGAGGAAAAACTAAAACTTTTATCAGCTTTATACAGAAAAAATGACTA
TCTAGAATCTCGCAGAAGACATGCAAGTCCCCATGAAAGACGCATGTATT
ACGAACACGATGAAGTATCTCGGTCTGAAGAATCTTTAAAACGTCGTTAC
GACGAGCATGAACGATCACTGACGCAAATATACCGACGAAATCCCAACGA
CTCTCGGTACATAGTGATGCCACCTTTAACGAAAATTTCAAAGGGGCGTG
ATGATTCAGATTTAATACTTCAACGAAAGATCGAGCGAAAATTAAAGGAC
TCGAAAAAAGACTCACGACAGGACACAGTCGAGCCGTACATAGATGTCCT
AGGTGACCAACACGAGTCAGAAATCGGAGATAAACAATCAACTTTGTATC
AACGGACTAATAGTCTCGATAGACTAGTTAAGTTGGAAGAAAAAGTAGCA
AGCACAAATCATCGTCCACCAAAAATCGATCATCGGCCGAAAAGTGCCGA
CATTTTACGCAAAGATACGGAGTCTAGATCACAGTCGAAAAGTCGGGAAA
GAACTGACGAAGAAGAATGTATACCAAAAGAAAACGAACCGTCTGACCAA
AAAGACGCCATCGTTGACAGCTTATTGATGGAGCGTTTATGGAAAAACGA
ACAGCAAAAGTTGTCGAGTGGCGTAACGACTAACGAAAAACCAGTAAAAA
GTCCGGTAAGTGACATCACAGGAGGGACGGCGAATTCCAGTTTCGACGAG
TCTTCCAGACATTATGACTCTTCTCATGATTCTGACAGTAGCGGAAAATC
AGAAGTTTATGATGAATCATACCAGATGAAAACACAAGCAGCGCACGGCC
TCATTTCACTTAATAGTGGCGGGGTAGCTACAAACACTAATGGAGCGAAC
GCCTCGGATGATAGCGGTGGTGCTGCTAAAGTGAAAAAGCGAGGTGGTGG
AAAACCAGGGCGGCGTCGAAAACGAGGCTATATATACGATCCTAAGCCAC
TTGTACCAAAATCAAAAATCAATAACCTTCCTGCAGAGCTTAAAGATGAA
GAGTATTGGACAAGGCGGCAACGTAACAACGAAGCCGCCAAGCGTTCCCG
CGAGAACAGACGTGTTAAAGAGCTGGAAATGATGACTTTAGTGAAAGATT
TGACTGGAACAAACACAGAGTTAAGGACAAGAATACAAGAGCTTGAAGTA
AGAAACAAATTCTTGGAGCAAATTTTGGGTCGACATCCAGCTGGTTTGGA
TGGGAGTGGAGGAAGTAACGCCTCGTCCTCAGATTTGTCCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065044-exon-scaffold_428-1575043694:330349..330489 | TCONS_00065044-exon-scaffold_428-1575043694:330349..330489 | Clytia hemisphaerica | exon |
| TCONS_00065044-exon-scaffold_428-1575043694:314254..316909 | TCONS_00065044-exon-scaffold_428-1575043694:314254..316909 | Clytia hemisphaerica | exon |
| TCONS_00065044-exon-scaffold_428-1510915933:330349..330489 | TCONS_00065044-exon-scaffold_428-1510915933:330349..330489 | Clytia hemisphaerica | exon |
| TCONS_00065044-exon-scaffold_428-1510915933:314254..316909 | TCONS_00065044-exon-scaffold_428-1510915933:314254..316909 | Clytia hemisphaerica | exon |
| TCONS_00065044-exon-scaffold_428-1491911889:330349..330489 | TCONS_00065044-exon-scaffold_428-1491911889:330349..330489 | Clytia hemisphaerica | exon |
| TCONS_00065044-exon-scaffold_428-1491911889:314254..316909 | TCONS_00065044-exon-scaffold_428-1491911889:314254..316909 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:314254..330489 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Blast
The following BLAST results are available for this feature:
|
