TCONS_00064953 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064953
Unique NameTCONS_00064953
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1889

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064953 ID=TCONS_00064953|Name=TCONS_00064953|organism=Clytia hemisphaerica|type=transcript|length=1889bp
TCAgtaaattataaaataatagAACAATGAATCTGTTGGTAATCTTTGGT
TTGATGTGTTTACAATGCAGTGAAATTCTCACCAGACTTTCCATTAAAGA
CATGCCAGAAGAAAATATGAATGTGCCAGAAATGATCCGTTACCATGGAT
ACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACATCCTGACA
CTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGAGGCTTCCC
GACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTGGACCATGA
ATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATGGATTTGAT
GTATGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCA
TCTTACGACCAAAGATGATAAATATTGGGACTTCAGCTGGGATGAAATGG
CGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTGACTGAA
CATCAACAGCTGCATTATGTCGGTCATTCACAAGGCACAACAATTGGTTT
CGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGATTCTAACATTTT
TCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAAGGAGCCATTAAA
TTTCTTTCCAACTTCGCTCCATTTATGAAGAAAATCATTGATTTGTTTGG
TATCCGTGACTTTTTGCCATCGAATGCCATCCTTGAATTCATTGCGCAAG
AAATTTGTGGACATTCGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTC
TTCTTGATCGCTGGATTTGATACGAGTAATTTGAACGATACAAGGTTACC
TGTCTACCTTTCCCATCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGC
ATTATCTTCAGATGGTGAAGAGCGGTAAATTCATCATGTACGATTATGGT
TCTACTGAAAAGAATCAACTCAATTATCATCAGAGCACACCACCACTGTA
CAATATTTCATCATGTGAAGTACCCGTCGCCATTTACAGTGGAAGTCAAG
ATTGGTTAGCTGACCCTGAAGATATTCACAACTCAATACTACATTTCCTT
CCCAACATTTTATCCACTAAAAACTTAGATAGTTGGAATCACTTAGACTT
TGTTTGGGGCATCGAGGCCAACCGATTTGTGTACACAGATGTTGTCAAAC
AAATGTTGGAACGAACTGATTTGTAACGTAAAGGTTGTGATCCACCAGAC
ATCATGTTCTTCTTATTCTTTGTTGTGTTTTACACATTCGTATGAAAAAC
TCCAGTTCAGAAGCACTTTATTTATTTCGTTTGTTTAAAAAACGTTCGTT
GAGAAGCCAATTCCATGAGGAGGATTTGGTAACGCGATCAAAAACTAAGT
TAATCGGTTTTTAGCTTCTGTTATTAACAAATTACTTAAAAAGGCGGGGT
TCAGCAGGAGGTATTCGATCTCGCGTAAAATTTTCCCCAGATTTCCGTCA
AATCGTCTGAAAAATAACAGAAATTCCACAGTGgaaaattccttcaaaat
tcAAGGTTTGTGTCCTAAAAAATTCcggaaattttgaataatttgccaat
tccgaaaatttttgctaaattttgttTTCTGCACTGAAATCGCGCAATTT
TTccgaggtttggtgaaatgccGCCACTTCGTTTGAAAAAGGGCGATTCC
GCTCCTCCACCGACCGTGAAACTTCTCCATTGAGagctaacaaaaagttt
caACAAAATGCTTTCGGAATATGTTTATACTTTTTATACTTgtctattta
tttttaaatttgaacccattgttattttatcatttttagggaGTTTAAAA
CTTAAGAGTTTAATTTCAAGAGAGAATAATTAAATTGTG
Run BLAST on NCBI

protein sequence of TCONS_00064953-protein

>TCONS_00064953-protein ID=TCONS_00064953-protein|Name=TCONS_00064953-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MNLLVIFGLMCLQCSEILTRLSIKDMPEENMNVPEMIRYHGYPCETHNIT
TQDGYILTLHRIPHGREKGEGGGFPTFLQHGFVDSSATWTMNPPSQSLAF
ILADNGFDVWLGNSRGNVYSNKHTHLTTKDDKYWDFSWDEMAKYDLPACV
EYVLNVTEHQQLHYVGHSQGTTIGFAGFSQNKVLASKILTFFALAPVATV
QHIKGAIKFLSNFAPFMKKIIDLFGIRDFLPSNAILEFIAQEICGHSHSS
EKVCGNIVFLIAGFDTSNLNDTRLPVYLSHLPSGTSVKDFLHYLQMVKSG
KFIMYDYGSTEKNQLNYHQSTPPLYNISSCEVPVAIYSGSQDWLADPEDI
HNSILHFLPNILSTKNLDSWNHLDFVWGIEANRFVYTDVVKQMLERTDL
Run BLAST on NCBI

transcript from alignment at scaffold_427:86108..90766-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064953 ID=TCONS_00064953|Name=TCONS_00064953|organism=Clytia hemisphaerica|type=transcript|length=4659bp|location=Sequence derived from alignment at scaffold_427:86108..90766- (Clytia hemisphaerica)
TCAGTAAATTATAAAATAATAGAACAATGAATCTGTTGGTAATCTTTGGT
TTGATGTGTTTACAATGCAGTGAAATTCTCACCAGACTTTCCATTAAAGA
CATGCCAGAAGAAAATATGAATGTGGTAAGAAAAATCATTCAGTTATCAC
ATCTCTTCTTCTTTAAATAATCACCTAGAATAAGTATCATTTCCTGGGGA
TATTTCTTTTTCAGCCAGAAATGATCCGTTACCATGGATACCCTTGTGAA
ACACATAACATCACCACACAAGATGGCTACATCCTGACACTTCACCGCAT
TCCTCATGGTAGAGAAAAGGGTGAGGGAGGAGGCTTCCCGACGTTTCTAC
AGCATGGTTTCGTTGATTCGTCTGCCACGTGGACCATGAATCCCCCCTCT
CAAAGTTTGGCTTTCATTCTCGCCGATAATGGGTAAGGGACCAAGTTTTT
CCTTTTCGCATCAGTTATTATTAGTCGTTATTTCTTAGATCAGACTTACA
AACTAAATATAAGGCAGGCGCAAATGAGCCCAACGTCTTATTGGTCAGTC
ATGCCGAAAGTTGTTGTTTATGCGAAAATTTTCATCTGGTATTTTGAACA
ACGATGAAATTGAAATGTTAGATGTTTTTATTGTTTCGATCTTAACACAG
GATCAAAAGCAACTTGTATGGATTAGATAAATCAAATCATTTAAAAACTA
TTTGTTTAGATTTGATGTATGGTTGGGAAATAGTCGTGGCAATGTTTATT
CGAACAAGCATACCCATCTTACGACCAAAGATGATAAATATTGGGACTTC
AGGTATTTGTTTTCTTTGATATTTATTTCACTGTTAAAGATAATTTGAGT
AGACGCGTTGAATCCCAAGCACTGTCACTTTTGAACGTTTTCATTGCTAC
CTTCATCTGACGAAGCTTTTACACNTTCACTTTTAAACGTTTTCATTGCT
ACCTTCATCTGACGAAGCTTTTACACCATTTAATTTCGTAGCTGGGATGA
AATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTGA
CTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGGTATGCTTTAT
TTCTGTATAAACCCTCAAGGGTGCTATGACTGGCTAAGATCGAATATCAA
GACTATATGATTTATCGTGAAACTCCTTTAACTCGATCTCGTTCGATTCA
GGCACAACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATC
AAAGATTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACA
TCAAAGGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGGTA
TGTCTTTGATCCACTTAAACGATTCACCAACTGAGAGATTTTCATTGGAG
TTGATAGAATATCTAAAATGTTTGGGTGTTTTCGATTCGATACAGGAAAT
GTGAGATTTTTTACACACATAAACCAGACCCGACAAGAAAAAAATTATGG
GAAATTATCAGGGTATGGGAAAAATGAAAGATTTCTTTGTTCATTTATAA
TATACATTAACTGAAAATTCTCTCTTCAGAAAATCATTGATTTGTTTGGT
ATCCGTGACTTTTTGCCATCGAATGCCATCCTTGAATTCATTGCGCAAGA
AATTTGTGGACATTCGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCT
TCTTGATCGCTGGATTTGATACGAGTAATTTGAACGATACAAGGTTACCT
GTCTACCTTTCCCATCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCA
TTATCTTCAGGTTAGTAAACATCTCACATAACTTCCCTATTACATCAATG
CTTTGTTGATTCGTAGCAATGGATGTTTCCTTGAAAGCTTTGATGCTAGT
AGCGTTAACAGTCTCTTTTGGTAGCTGGTTCCATGCTGTCACACATCGAT
AATAAAATGGCTTGGTCTGGACACCTCTGAATCCATCGTCTGCAAAGTTT
GGTATCAGTTCGTAATCGTGAATTCGAGATGGACGCACTCTGCGAATAAA
CATTCTAACTGCGGTGCCCTTATCGTAGAAGTGCAAGTGTTTGTAGATCT
GAACCATGTCTCCGAAGTGTCTTCTGAATTCGAGAGAAGGCAAGTCAAGT
TTTCGTAGGCGCTGCTCGTATGGTAGATTACTTAACCTTCTGATACTTCA
TAATGTGCTTTCTTATAAATGATTCCATTAACTTACAGACTACTGAAGTC
GAACTAACAGGTCTATAATTTATCGCAAGGTTTTGGGCACCCCTTTTATA
AATTGGAGTGACATGTGCCATCTTCCAATCTTTTGGTATTGTTCCCTCTG
ACAAATTCTTGTTCATGATGATAGTCAGGGGTTTGGCTAGATGGTCAATC
AGTTCAACTAACATTTTCGGGTGTATATCATCTGGACCGAAGGATTTACT
CACGTCCAGCAATTTTATCTGTTTTCTCATCATATCTTCTGTTATGGTGA
TGTTCTCAACTTGAATCTCTGTTCGTGTAGGAAAGTCGGGAATCGTTCCT
GGGGGCTCATTGGTAAAGACGCTGCAAAACTGTTTTTGTAGGATGTTAGC
CTTGTCGAGATCGTCGTGTNGGAAAGTCGGGAATCGTTTCCGGGGGCTCA
TGATAGACGCTGCAAAACTGTTTTTGTAGGATATTAGCCTTGTCGAGATC
GTCATGTTTAATCGATGATTTGTCATCAGGGTTTTCAAGTAGTGGTGAGA
CTTCGCTTGATGACTTAAGTTTAGCTTTTACATGAGACCAAAACATCTTT
GGCTTTTCCTTGGATTTATCACAAATGCTTTTTTCATAAGTCCTGTGGGC
CTTTGACATCAAACGATAGTGTAATTGACACTTTGGCGATCTCTGTCGAG
AGGTGCAGATCTTAACCACCTTCTATGGAGCGTTTTCGTCAACTTGATTT
CATCTTGAAGATTCTTATTAATCGGAACTTTACCTTTTTTCCTCCAAAAA
TCGTTTCCAACTTCTTTCAAAGGGACAAACCGATTTCTGAGATAAATGAC
AACTTTCTTGAACGATTCCCAAAGATCTTTCACTGATTTATTGATAAGTT
CCTCTACATCGAGTTGGTTCATTAACATGTTGATAGAGATATGCGTCTTT
CAAAGCATTTAAGAATTTCTCTTCTTTGCTATCCTCCAGATACGGGGTGG
TCCAGTTTTCCAAATTGATTGTTGGAAAGTTGAAATCTCCTAACAAACAT
TTGTGCGAATATTTCTTGTTTAATGCAATGGACTTGATCAATAAGTTTAG
GTTGTTGTTGTTTTCGTTAGAGGACGCAGATCTAGTTGGGCTTCGATAAA
TGCATGCAACAGCGAGCAAATCTTTTCCTGATAGTTGTACTTCAATCATG
CAGACTTCATTGAAAGTCACTGGAGGCTTGACATCGATTACCAAGTGTTT
AATGGAGATATAGCTTAATCATTGTCGTACAACACTTCGTTCTACGCAAG
ATACATTCTGGTACAGGGTAGATTTGAGTGTAAATTTGATGTTCTTTCTT
GTAGATGGTGAAGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTG
AAAAGAATCAACTCAATTATCATCAGGTATACCCTTTCTTACTTGCAGCA
AAAAGCTTTTAGACTGACTTGGACTTCTTATTGCTCCTTGTGGTGGATCT
GAAATCATGCAGGCTGTAGTATTCTAATATTTTAACTTGACTTGGATTTT
CAGAGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGC
CATTTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACA
ACTCAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGAT
AGTTGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGT
GTACACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAACGTA
AAGGTTGTGATCCACCAGACATCATGTTCTTCTTATTCTTTGTTGTGTTT
TACACATTCGTATGAAAAACTCCAGTTCAGAAGCACTTTATTTATTTCGT
TTGTTTAAAAAACGTTCGTTGAGAAGCCAATTCCATGAGGAGGATTTGGT
AACGCGATCAAAAACTAAGTTAATCGGTTTTTAGCTTCTGTTATTAACAA
ATTACTTAAAAAGGCGGGGTTCAGCAGGAGGTATTCGATCTCGCGTAAAA
TTTTCCCCAGATTTCCGTCAAATCGTCTGAAAAATAACAGAAATTCCACA
GTGGAAAATTCCTTCAAAATTCAAGGTTTGTGTCCTAAAAAATTCCGGAA
ATTTTGAATAATTTGCCAATTCCGAAAATTTTTGCTAAATTTTGTTTTCT
GCACTGAAATCGCGCAATTTTTCCGAGGTTTGGTGAAATGCCGCCACTTC
GTTTGAAAAAGGGCGATTCCGCTCCTCCACCGACCGTGAAACTTCTCCAT
TGAGAGCTAACAAAAAGTTTCAACAAAATGCTTTCGGAATATGTTTATAC
TTTTTATACTTGTCTATTTATTTTTAAATTTGAACCCATTGTTATTTTAT
CATTTTTAGGGAGTTTAAAACTTAAGAGTTTAATTTCAAGAGAGAATAAT
TAAATTGTG

Coding sequence (CDS) from alignment at scaffold_427:86108..90766-

>TCONS_00064953 ID=TCONS_00064953|Name=TCONS_00064953|organism=Clytia hemisphaerica|type=CDS|length=9600bp|location=Sequence derived from alignment at scaffold_427:86108..90766- (Clytia hemisphaerica)
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
AGCACACCACCACTGTACAATATTTCATCATGTGAAGTACCCGTCGCCAT
TTACAGTGGAAGTCAAGATTGGTTAGCTGACCCTGAAGATATTCACAACT
CAATACTACATTTCCTTCCCAACATTTTATCCACTAAAAACTTAGATAGT
TGGAATCACTTAGACTTTGTTTGGGGCATCGAGGCCAACCGATTTGTGTA
CACAGATGTTGTCAAACAAATGTTGGAACGAACTGATTTGTAAATGGTGA
AGAGCGGTAAATTCATCATGTACGATTATGGTTCTACTGAAAAGAATCAA
CTCAATTATCATCAGAAAATCATTGATTTGTTTGGTATCCGTGACTTTTT
GCCATCGAATGCCATCCTTGAATTCATTGCGCAAGAAATTTGTGGACATT
CGCATTCGTCAGAAAAAGTGTGTGGAAACATCGTCTTCTTGATCGCTGGA
TTTGATACGAGTAATTTGAACGATACAAGGTTACCTGTCTACCTTTCCCA
TCTGCCCTCTGGTACATCCGTTAAAGACTTCTTGCATTATCTTCAGGCAC
AACAATTGGTTTCGCTGGGTTCAGTCAAAACAAAGTTCTTGCATCAAAGA
TTCTAACATTTTTCGCTCTTGCACCGGTGGCCACCGTTCAACACATCAAA
GGAGCCATTAAATTTCTTTCCAACTTCGCTCCATTTATGAAGCTGGGATG
AAATGGCGAAGTATGACCTTCCTGCATGTGTGGAATACGTACTGAACGTG
ACTGAACATCAACAGCTGCATTATGTCGGTCATTCACAAGATTTGATGTA
TGGTTGGGAAATAGTCGTGGCAATGTTTATTCGAACAAGCATACCCATCT
TACGACCAAAGATGATAAATATTGGGACTTCAGCCAGAAATGATCCGTTA
CCATGGATACCCTTGTGAAACACATAACATCACCACACAAGATGGCTACA
TCCTGACACTTCACCGCATTCCTCATGGTAGAGAAAAGGGTGAGGGAGGA
GGCTTCCCGACGTTTCTACAGCATGGTTTCGTTGATTCGTCTGCCACGTG
GACCATGAATCCCCCCTCTCAAAGTTTGGCTTTCATTCTCGCCGATAATG
GATGAATCTGTTGGTAATCTTTGGTTTGATGTGTTTACAATGCAGTGAAA
TTCTCACCAGACTTTCCATTAAAGACATGCCAGAAGAAAATATGAATGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040730XLOC_040730Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064953-exon-scaffold_427-1575043694:90642..90766TCONS_00064953-exon-scaffold_427-1575043694:90642..90766Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:90335..90552TCONS_00064953-exon-scaffold_427-1575043694:90335..90552Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:89965..90057TCONS_00064953-exon-scaffold_427-1575043694:89965..90057Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:89678..89775TCONS_00064953-exon-scaffold_427-1575043694:89678..89775Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:89420..89565TCONS_00064953-exon-scaffold_427-1575043694:89420..89565Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:88957..89187TCONS_00064953-exon-scaffold_427-1575043694:88957..89187Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:87141..87212TCONS_00064953-exon-scaffold_427-1575043694:87141..87212Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1575043694:86108..87013TCONS_00064953-exon-scaffold_427-1575043694:86108..87013Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:90642..90766TCONS_00064953-exon-scaffold_427-1510915933:90642..90766Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:90335..90552TCONS_00064953-exon-scaffold_427-1510915933:90335..90552Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:89965..90057TCONS_00064953-exon-scaffold_427-1510915933:89965..90057Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:89678..89775TCONS_00064953-exon-scaffold_427-1510915933:89678..89775Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:89420..89565TCONS_00064953-exon-scaffold_427-1510915933:89420..89565Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:88957..89187TCONS_00064953-exon-scaffold_427-1510915933:88957..89187Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:87141..87212TCONS_00064953-exon-scaffold_427-1510915933:87141..87212Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1510915933:86108..87013TCONS_00064953-exon-scaffold_427-1510915933:86108..87013Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:90642..90766TCONS_00064953-exon-scaffold_427-1491911889:90642..90766Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:90335..90552TCONS_00064953-exon-scaffold_427-1491911889:90335..90552Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:89965..90057TCONS_00064953-exon-scaffold_427-1491911889:89965..90057Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:89678..89775TCONS_00064953-exon-scaffold_427-1491911889:89678..89775Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:89420..89565TCONS_00064953-exon-scaffold_427-1491911889:89420..89565Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:88957..89187TCONS_00064953-exon-scaffold_427-1491911889:88957..89187Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:87141..87212TCONS_00064953-exon-scaffold_427-1491911889:87141..87212Clytia hemisphaericaexon
TCONS_00064953-exon-scaffold_427-1491911889:86108..87013TCONS_00064953-exon-scaffold_427-1491911889:86108..87013Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064953-proteinTCONS_00064953-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_427supercontigscaffold_427:86108..90766 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.08061	8.89621	2.51061	2.12874	14.2962	11.5896	12.5434	13.8018	10.0367	10.5143	12.3236	10.1403	9.88748	12.0769	23.2632	30.1767	14.0616	17.5649	15.2426	14.2354	10.2293	10.218	23.7773	21.6831	17.3676	17.4428	17.6056	17.7694	30.9864	25.6717
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006693AB_hydrolase_lipase
IPR025483Lipase_euk
IPR029058AB_hydrolase
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Blast
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BLAST of TCONS_00064953 vs. Swiss-Prot (Human)
Match: LIPG (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.080e-118
Identity = 179/371 (48.25%), Postives = 253/371 (68.19%), Query Frame = 3 
Query:  105 PEENMNVPEMIRYHGYPCETHNITTQDGYILTLHRIPHGRE-KGEGGGFPT-FLQHGFVDSSATWTMNPPSQSLAFILADNGFDVWLGNSRGNVYSNKHTHLTTKDDKYWDFSWDEMAKYDLPACVEYVLNVTEHQQLHYVGHSQGTTIGFAGFSQNKVLASKILTFFALAPVATVQHIKGAIKFLSNFAPFMKKIIDLFGIRDFLPSNAILEFIAQEICGHSHSSEKVCGNIVFLIAGFDTSNLNDTRLPVYLSHLPSGTSVKDFLHYLQMVKSGKFIMYDYGSTEKNQLNYHQSTPPLYNISSCEVPVAIYSGSQDWLADPEDIHNSILHFLPNILSTKNLDSWNHLDFVWGIEANRFVYTDVVKQMLE 1211
            PE  MN+ +MI Y GYP E + + T+DGYIL ++RIP+G++  G  G  P  FLQHG + S+  W  N P+ SLAFILAD G+DVWLGNSRGN ++ ++ + +    ++W FS+DEMAKYDLPA +++++  T  +QLHYVGHSQGTTIGF  FS N  LA +I TF+ALAPVATV++ K  I  L      + K I  FG + F P N   +F+A E+C     +  +C N +F+I GFD+ N N +RL VYLSH P+GTSV++  H+ Q VKSGKF  YD+GS  +N+++Y QS PP YN+++  VP+A+++G +D LADP+D+   +L  LPN++  K +  +NHLDF+W ++A + VY D+V  + E
Sbjct:   29 PEVTMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQSLFKFI--FGDKIFYPHNFFDQFLATEVCSREMLN-LLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDV-GLLLPKLPNLIYHKEIPFYNHLDFIWAMDAPQEVYNDIVSMISE 395
The following BLAST results are available for this feature:
BLAST of TCONS_00064953 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIPG1.080e-11848.25Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
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