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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064902 ID=TCONS_00064902|Name=TCONS_00064902|organism=Clytia hemisphaerica|type=transcript|length=1974bp
AAAGGaaacacttttttcatattcaaaataatcatagATCATTATTGCTT
TTCAGGTAAAAAGTTCTAAATTAACCAGCAAACAAAATTATACTTTCAAA
ACATTCTTAAAGCTTTTGGAACGATGAATACTCGTCAAAGTGTAATTCTG
CTCGTAGTCCTGGCGATTCAGTTGGAATTGATCCAAGGTTACTGCACACC
AAAAAACAAATATTGCTGGCCATCAGAAAATGTCTGGCAACTTCGTCTTG
GTAGCCGTTTAGATGGAAATCTTCATAAATTTGATCCATTCGTACTTTTA
CAATGTCGAAATATAAACAGTTCAATGGTGCTTGGTGAATCTGCAAATGG
CGCTTGTATGCAGATTCCAGAATGctcaaaaagattttgtctgGCCGACC
AACCTTCCAATCTCCCATCATACAGTGTTGAAGCAAAAACAACAAGAGAT
GTTGTTCGTGCTTTCAAATTTGCCAACAGATTCAATATTGCAGTCACCGT
GAAAACGACCGGTCATTCTTTCTCTGGATCAAGTTTCGGACGCGATACTT
TAATGATCTGGAtgagaaactttcaaaaatttggcgATATTTCAACAACT
TACGAAGATTCCTGTCACGTGAAGTATNACCGGTCATTCTTTCTCTGGAT
CAAGTTTCGGACGCGATACTTTAATGATCTGGATGAGAAACTTTCAGAAG
TTTGGCGATATTTCCAcaattttcgaagattcctgTCACATAAAGTACCC
AGCATCCATCAAAATTGGCGGAGGTCAAATTTGGTCCGAAATCTACAGTA
AAATTGCCGGTACCGAGTACAACATTATGGGAGCTTTGGCACCAGTTGTT
TCTGCAGCAGGTGGCTGGTTACAAGGGAGTGGTTTATCTCCTTTATCTCG
TCAACATGGTCTTGGTGTTGACAATGTGATCAGCTTCAAAGTGGTTCAAC
CAAATGGATGTGTTGTCACAGCTGATGCATGTCgaaacaaagatttgttt
tGGGCGTTACGTGGTGGAGGAGGCGGCGCTTTTGGCGTGGTTGTATCAAC
ACAATATCGTCTCTTACCCAAGAAGCCTATTACTTTTCTCGCATTCTTTT
TATCTCCCGTTGGAATTCCTTTTGAAGTTTTCCTCCATATGGCACATAGT
TTTATGGACTTTTGGGCTGTAAAATCAACAACGCTTGACAACCGATGGGG
TGGATTATGGAACGGCACCTCACTGCAATTACTTTTCGAAGGAGAAAGAA
ACGAAGCAAATTCAACCCTCATTGAAGAGCTCAATGCTTGGAAGAATAAG
TTCGACAAAGCCTACCATAATAATATCTTCATCATAGCACAAGATTTCCC
TGGCATTTCAGAAGCGAATGTCATCCTTGGTCAGTTCCTTCAACTCGATA
ATACGGAAGGAGCCACGTTTACGCGGGATATAGCAAATCGTTTGATCCCA
AAGAAATGGATTGAAAAGAATCCCACAAAAGCTGCTGAtcttttgaaagc
tcttttccAAACAACACTGGAGACTGGAGCAATCACTTCAAATTATATCG
TAGGAGGGGTTATCAGTGAAGTTCCTCATAAAGCTACTGCTGTCAGTCCG
AAAATTCGTGACGCACTTTGGCAGATTGGAACATATGGAGACACTCTCTT
GAAAGTCATCGATCAAGAATTGCCAGGACTAGGATCAGGTTACAACCATG
GCAGCAAAACGGAATCTGATTGGCGCAAGAAGTTTTGGGATTCGAATCTT
TCTCGATTACAAAGATTGAAAAGAAGGTTCGACCGTTGCAACCGTTTGAA
TTGCTGGCATTGTATTGGGTACAAAGGAACTGAGATTTAAATGATTGAAA
AACTATTGAAAGAATTATAATGGATTAGCTCAGAAATATTCAAGTTTCTG
GAATCTTATTTTACTACTACTTTATTTCGACTGATTATTGACCGTCAAAT
TTTACATCCATAGGCTAAtgatct Run BLAST on NCBI protein sequence of TCONS_00064902-protein >TCONS_00064902-protein ID=TCONS_00064902-protein|Name=TCONS_00064902-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
MIWMRNFQKFGDISTIFEDSCHIKYPASIKIGGGQIWSEIYSKIAGTEYN
IMGALAPVVSAAGGWLQGSGLSPLSRQHGLGVDNVISFKVVQPNGCVVTA
DACRNKDLFWALRGGGGGAFGVVVSTQYRLLPKKPITFLAFFLSPVGIPF
EVFLHMAHSFMDFWAVKSTTLDNRWGGLWNGTSLQLLFEGERNEANSTLI
EELNAWKNKFDKAYHNNIFIIAQDFPGISEANVILGQFLQLDNTEGATFT
RDIANRLIPKKWIEKNPTKAADLLKALFQTTLETGAITSNYIVGGVISEV
PHKATAVSPKIRDALWQIGTYGDTLLKVIDQELPGLGSGYNHGSKTESDW
RKKFWDSNLSRLQRLKRRFDRCNRLNCWHCIGYKGTEI Run BLAST on NCBI transcript from alignment at scaffold_425:327493..329466 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064902 ID=TCONS_00064902|Name=TCONS_00064902|organism=Clytia hemisphaerica|type=transcript|length=1974bp|location=Sequence derived from alignment at scaffold_425:327493..329466 (Clytia hemisphaerica)
agatcaTTAGCCTATGGATGTAAAATTTGACGGTCAATAATCAGTCGAAA
TAAAGTAGTAGTAAAATAAGATTCCAGAAACTTGAATATTTCTGAGCTAA
TCCATTATAATTCTTTCAATAGTTTTTCAATCATTTAAATCTCAGTTCCT
TTGTACCCAATACAATGCCAGCAATTCAAACGGTTGCAACGGTCGAACCT
TCTTTTCAATCTTTGTAATCGAGAAAGATTCGAATCCCAAAACTTCTTGC
GCCAATCAGATTCCGTTTTGCTGCCATGGTTGTAACCTGATCCTAGTCCT
GGCAATTCTTGATCGATGACTTTCAAGAGAGTGTCTCCATATGTTCCAAT
CTGCCAAAGTGCGTCACGAATTTTCGGACTGACAGCAGTAGCTTTATGAG
GAACTTCACTGATAACCCCTCCTACGATATAATTTGAAGTGATTGCTCCA
GTCTCCAGTGTTGTTTggaaaagagctttcaaaagaTCAGCAGCTTTTGT
GGGATTCTTTTCAATCCATTTCTTTGGGATCAAACGATTTGCTATATCCC
GCGTAAACGTGGCTCCTTCCGTATTATCGAGTTGAAGGAACTGACCAAGG
ATGACATTCGCTTCTGAAATGCCAGGGAAATCTTGTGCTATGATGAAGAT
ATTATTATGGTAGGCTTTGTCGAACTTATTCTTCCAAGCATTGAGCTCTT
CAATGAGGGTTGAATTTGCTTCGTTTCTTTCTCCTTCGAAAAGTAATTGC
AGTGAGGTGCCGTTCCATAATCCACCCCATCGGTTGTCAAGCGTTGTTGA
TTTTACAGCCCAAAAGTCCATAAAACTATGTGCCATATGGAGGAAAACTT
CAAAAGGAATTCCAACGGGAGATAAAAAGAATGCGAGAAAAGTAATAGGC
TTCTTGGGTAAGAGACGATATTGTGTTGATACAACCACGCCAAAAGCGCC
GCCTCCTCCACCACGTAACGCCCaaaacaaatctttgtttcGACATGCAT
CAGCTGTGACAACACATCCATTTGGTTGAACCACTTTGAAGCTGATCACA
TTGTCAACACCAAGACCATGTTGACGAGATAAAGGAGATAAACCACTCCC
TTGTAACCAGCCACCTGCTGCAGAAACAACTGGTGCCAAAGCTCCCATAA
TGTTGTACTCGGTACCGGCAATTTTACTGTAGATTTCGGACCAAATTTGA
CCTCCGCCAATTTTGATGGATGCTGGGTACTTTATGTGAcaggaatcttc
gaaaattgTGGAAATATCGCCAAACTTCTGAAAGTTTCTCATCCAGATCA
TTAAAGTATCGCGTCCGAAACTTGATCCAGAGAAAGAATGACCGGTNATA
CTTCACGTGACAGGAATCTTCGTAAGTTGTTGAAATATcgccaaattttt
gaaagtttctcaTCCAGATCATTAAAGTATCGCGTCCGAAACTTGATCCA
GAGAAAGAATGACCGGTCGTTTTCACGGTGACTGCAATATTGAATCTGTT
GGCAAATTTGAAAGCACGAACAACATCTCTTGTTGTTTTTGCTTCAACAC
TGTATGATGGGAGATTGGAAGGTTGGTCGGCcagacaaaatctttttgag
CATTCTGGAATCTGCATACAAGCGCCATTTGCAGATTCACCAAGCACCAT
TGAACTGTTTATATTTCGACATTGTAAAAGTACGAATGGATCAAATTTAT
GAAGATTTCCATCTAAACGGCTACCAAGACGAAGTTGCCAGACATTTTCT
GATGGCCAGCAATATTTGTTTTTTGGTGTGCAGTAACCTTGGATCAATTC
CAACTGAATCGCCAGGACTACGAGCAGAATTACACTTTGACGAGTATTCA
TCGTTCCAAAAGCTTTAAGAATGTTTTGAAAGTATAATTTTGTTTGCTGG
TTAATTTAGAACTTTTTACCTGAAAAGCAATAATGATctatgattatttt
gaatatgaaaaaagtgtttCCTTT Coding sequence (CDS) from alignment at scaffold_425:327493..329466 >TCONS_00064902 ID=TCONS_00064902|Name=TCONS_00064902|organism=Clytia hemisphaerica|type=CDS|length=1167bp|location=Sequence derived from alignment at scaffold_425:327493..329466 (Clytia hemisphaerica)
TTAAATCTCAGTTCCTTTGTACCCAATACAATGCCAGCAATTCAAACGGT
TGCAACGGTCGAACCTTCTTTTCAATCTTTGTAATCGAGAAAGATTCGAA
TCCCAAAACTTCTTGCGCCAATCAGATTCCGTTTTGCTGCCATGGTTGTA
ACCTGATCCTAGTCCTGGCAATTCTTGATCGATGACTTTCAAGAGAGTGT
CTCCATATGTTCCAATCTGCCAAAGTGCGTCACGAATTTTCGGACTGACA
GCAGTAGCTTTATGAGGAACTTCACTGATAACCCCTCCTACGATATAATT
TGAAGTGATTGCTCCAGTCTCCAGTGTTGTTTggaaaagagctttcaaaa
gaTCAGCAGCTTTTGTGGGATTCTTTTCAATCCATTTCTTTGGGATCAAA
CGATTTGCTATATCCCGCGTAAACGTGGCTCCTTCCGTATTATCGAGTTG
AAGGAACTGACCAAGGATGACATTCGCTTCTGAAATGCCAGGGAAATCTT
GTGCTATGATGAAGATATTATTATGGTAGGCTTTGTCGAACTTATTCTTC
CAAGCATTGAGCTCTTCAATGAGGGTTGAATTTGCTTCGTTTCTTTCTCC
TTCGAAAAGTAATTGCAGTGAGGTGCCGTTCCATAATCCACCCCATCGGT
TGTCAAGCGTTGTTGATTTTACAGCCCAAAAGTCCATAAAACTATGTGCC
ATATGGAGGAAAACTTCAAAAGGAATTCCAACGGGAGATAAAAAGAATGC
GAGAAAAGTAATAGGCTTCTTGGGTAAGAGACGATATTGTGTTGATACAA
CCACGCCAAAAGCGCCGCCTCCTCCACCACGTAACGCCCaaaacaaatct
ttgtttcGACATGCATCAGCTGTGACAACACATCCATTTGGTTGAACCAC
TTTGAAGCTGATCACATTGTCAACACCAAGACCATGTTGACGAGATAAAG
GAGATAAACCACTCCCTTGTAACCAGCCACCTGCTGCAGAAACAACTGGT
GCCAAAGCTCCCATAATGTTGTACTCGGTACCGGCAATTTTACTGTAGAT
TTCGGACCAAATTTGACCTCCGCCAATTTTGATGGATGCTGGGTACTTTA
TGTGAcaggaatcttcgaaaattgTGGAAATATCGCCAAACTTCTGAAAG
TTTCTCATCCAGATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064902-exon-scaffold_425-1491911889:327493..329466 | TCONS_00064902-exon-scaffold_425-1491911889:327493..329466 | Clytia hemisphaerica | exon |
| TCONS_00064902-exon-scaffold_425-1510915933:327493..329466 | TCONS_00064902-exon-scaffold_425-1510915933:327493..329466 | Clytia hemisphaerica | exon |
| TCONS_00064902-exon-scaffold_425-1575043694:327493..329466 | TCONS_00064902-exon-scaffold_425-1575043694:327493..329466 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_425 | supercontig | scaffold_425:327493..329466 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016491 | oxidoreductase activity |
| GO:0003824 | catalytic activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0050660 |
flavin adenine dinucleotide binding |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
| molecular_function |
GO:0016614 |
oxidoreductase activity, acting on CH-OH group of donors |
Blast
The following BLAST results are available for this feature:
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