TCONS_00064890 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064890
Unique NameTCONS_00064890
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1498

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064890 ID=TCONS_00064890|Name=TCONS_00064890|organism=Clytia hemisphaerica|type=transcript|length=1498bp
TGAAGacaatttgaagttttgaagACTTTTGTAGGTTGAGCTTAATATTA
TTTACATTAGTAAAGTTTTAAGATGATGAACCTTGGCCACCGGACCCTGA
TTGTAATTCTTACGGCCCATCTAGTCCGGTGTGATGGCCACGAGGAATGC
CAGCAAAAGTTCGAATTCAAAGCTAGCATGTGTCGACCAGATAAACCCCA
AGGCTGTCTCTATGGACCACCAAAGAATATATCACATTGTGAAGATTTAT
CAATTTCTACAATCATCAATGAGCCTTACACTACCTACTTTTTCCGTGCG
TATATGGACATCCTTATAATAAACCAATGTTGTGGTTGCCTCAACTTCAC
GCAAATATACCGGACAACCTACAACGATACAACGGAATTCCTTCAACGGA
AAAACAGTGGAACTGGACCCGTAGAACGAATCATATATCCGGTCTTAGGT
GATCCTTCACAGAAAAAGTATTACGGAATGTATTTTGTACCGATGTATTA
TCTGGAAGAAGGACTTCTTATCACtttgaagaaaacttctggTGAAATTG
TCACTGATCTGTTGTTTCGAATCGCTGGCTTGTGGCCACTGTTGGTCATC
TTTCTGCTCATGGCAGCGATATCCGGTTTCATACTTTGGGCTGTTGAGAC
AAGGAGGAATCGGGAAGCTTTTCGTCGACCGTTCCATCAAGGATTTTTGG
ATGGTTTTTGGTGGGGATTTGTTAGTATGACTACTGTTGGTTACGGGGAC
AAAGTACCGATCACGTGGGTTGGTCGTTTATTTTCGTCTTTTTGGATCAT
CGGTGGAATCACTCTCTGCTCCATTTTGACTGCTTCCATgactgacgtca
tcaatcacgTGACCTTACCCAAACAAGCTACCCTCTCTGGAAAaGTCGGT
ATTTTGGAGGGTCGTTTATTTGAAACTCAAATGGTGACGAGGAGCGGTGG
AACTTTCCATGAGATGCCAACATTGAAAGATCTTCTCGACACGTTGGACA
GCAATGAAATATCTGGAATACTTTTGGATTACATCACCAAAAACTACCTT
CTTCCAAAAGCAATCACCAAGACAAATCGAGATAAAAATCTCTACCGTTC
CACTTCCTTTCAATCGACTGCTCATAAATCTTACACATATGGCGCCTTAT
TCAGAGAAGAAAGGGACGCCAATTTCTTCAGAAATGTGATTTATCAAACG
GCAGATGGCGTGGAAATATGCTTCTCCAGAGCTTTTAGGGACAAAATGGA
TTACGTACCTCCCGCATTGTTTTCACCAGATTCGAAAATCTTCCAGCATT
CGTGTTTCGTTTTCTTTGCAATTCTCGTTTGTATCGGAATGTTTGGTATT
TTGTACGAATGTCGccggaagaagaagaaggaagcGGTAATACCGGCTCA
GGGAAGCAAAGAGTGAAGTGAAATATCATATTAAGATTATTTTGCATAAT
TATGTTGTAAATAAATGTATATGAAATAAATGTAAAGGAAATCAAACT
Run BLAST on NCBI

protein sequence of TCONS_00064890-protein

>TCONS_00064890-protein ID=TCONS_00064890-protein|Name=TCONS_00064890-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
MMNLGHRTLIVILTAHLVRCDGHEECQQKFEFKASMCRPDKPQGCLYGPP
KNISHCEDLSISTIINEPYTTYFFRAYMDILIINQCCGCLNFTQIYRTTY
NDTTEFLQRKNSGTGPVERIIYPVLGDPSQKKYYGMYFVPMYYLEEGLLI
TLKKTSGEIVTDLLFRIAGLWPLLVIFLLMAAISGFILWAVETRRNREAF
RRPFHQGFLDGFWWGFVSMTTVGYGDKVPITWVGRLFSSFWIIGGITLCS
ILTASMTDVINHVTLPKQATLSGKVGILEGRLFETQMVTRSGGTFHEMPT
LKDLLDTLDSNEISGILLDYITKNYLLPKAITKTNRDKNLYRSTSFQSTA
HKSYTYGALFREERDANFFRNVIYQTADGVEICFSRAFRDKMDYVPPALF
SPDSKIFQHSCFVFFAILVCIGMFGILYECRRKKKKEAVIPAQGSKE
Run BLAST on NCBI

transcript from alignment at scaffold_425:395045..401426-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064890 ID=TCONS_00064890|Name=TCONS_00064890|organism=Clytia hemisphaerica|type=transcript|length=6382bp|location=Sequence derived from alignment at scaffold_425:395045..401426- (Clytia hemisphaerica)
TGAAGACAATTTGAAGTTTTGAAGACTTTTGTAGGTTGAGCTTAATATTA
TTTACATTAGTAAAGTTTTAAGATGATGAACCTTGGCCACCGGACCCTGA
TTGTAATTCTTACGGCCCATCTAGTCCGGTGTGATGGCCACGAGGAATGC
CAGCAAAAGTTCGAATTCAAAGCTAGCATGTGTCGACCAGATAAACCCCA
AGGCTGTCTCTATGGACCACCAAAGAATATATCACATTGTGAAGATTTAT
CAATTTCTACAATCATCAATGAGCCTTACACTACCTACTTTTTCCGTGGT
GAGTCTGTTGTTCTTGTCAAATTTCATTTCTTCGCTTCTGTCAAAAAAGG
AAGATAGATTAGTCACATATAGTCTTTATAAAAACACTGCTCTCCAAGCT
TATTGTTTTCCTTTGTTATTATCAAAAGATGAAAATTGATTTGCTCAGTT
TTTGCCCTTTTTGATCAAGTTACCAAGTATTCCTCTTGGGATTGGTTTAT
GATTTAATCACATGATCAAAAAGTGAGCAAAAAAACTAATTTCTCAACAC
AAGTTCAAGTAAGAAACAATGGAAAGAAACAAAAGGCTTCCAAACCGGGT
TTTTTATGCGGACTATGGTCACAGATTTCAGAACACAGGGTAATTGATCG
CATTAATCCCCAGCTGATACACAACGTTTTTTCAACGTCTATCTAACGTT
TACAATGTCCATATAACATTAGAGTATTTGTCTTTTTACTTTTTTTGAAA
GATACATTCATAAAAATATTTTATTACGAGATTGATATTTTAATTGTTTT
TATAAGTTTATTGCTTCATTGTAACCATTTATATGTTAATAACTGTGTTG
CGTTAAAGAGAGAACCTAGACATACAGGGTGTCCGGAAAAAAAGGTACCG
AGTCGTACCACTTCTACAGGGTGTCGCTAATAAAAGTATCGAGTTTGAAC
ATTCGATTGAGTAAAAAAGTTTGTGTGTGTTATCGCTAAAATATAAGAAC
GTTCTCCATCACATAGGCTCATTACAAAAGGTAGTTACAACGTATAAATT
AATCAATAGCCCTTTTTACTATTCCCCTATTGCATAAATGTACGTCTTTA
AAAATCAAAATTAATAAAAATTCAAATTCTCTCGGGGTAGTAAAAATTAG
TTGCTTTTGTAAACAGGCAGAGTATGTTTTTATTGTTACGTAATGACAAA
GAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTGAATACACACTTAAAA
CTTTCTACTCAATCGCATGTTCAAACTCGATACTTTTATTAGGGACACCC
TGTATAGAAGGAAAGTTCTTGTGTGTGTTTATCAAATTTTCTCTCTGTGT
AATATTAATTGTCACGAGACATCTTTTATTGAATAACTTTTACAAAAAAC
AATTCTCAATAACTTCAATGTCATGGAAATTGTAAAAAAATTTAATTCTT
TCTTAATCATAAGGACTGTTGTAAAAACAATTATGTTGATATATATATTT
TCTTGCATTTTGTTAAACACACGTAACAACCTTCTACTCAGAATCATGTT
CGAACTCGATACTTTTTTTCGGGACACCCTGCATACACACAATCTTTTCT
ACTTGTAGTCGTGTTCTCTGTCACAGGACTTTTTCTCAAGACACCCTGTA
TGCTTATGTCCCGAATTGGTGTCGAGTGCAAATTGAAACTACAACTACAA
ACATTTTTCTTTTTTCACTCACAGACCTACCAATTACACGTGATTATTTT
TTAAGGCTTTTTATTCAATTTTCCTTTATTGTAGCGTATATGGACATCCT
TATAATAAACCAATGTTGTGGTTGCCTCAACTTCACGCAAATATACCGGA
CAACCTACAACGATACAACGGAATTCCTTCAACGGAAAAACAGTGGAACT
GGACCCGTAGAACGAATCATATATCCGGTCTTAGGTGATCCTTCACAGAA
AAAGTATTACGGAATGTATTTTGTACCGATGTATTATCTGGAAGAAGGAC
TTCTTATCACTTTGAAGAAAACTTCTGGTGAAATTGTCACTGATCTGTTG
TTTCGAATCGCTGGCTTGTGGCCACTGTTGGTCATCTTTCTGCTCATGGC
AGCGATATCCGGTTTCATACTTTGGGCTGTTGTAAGTCAATTGGGGCATT
TCTACTAAAAGATGACTGACTTTATACATAAGTCAACTTACAGACAAAGC
CACTTTAATCTAACCTGAGATCAGATCGTGATTGTTTTCTACCCGCTGAA
GCTCTAAAGGGATGGGTGAAAACATAACAATCTGACAAATATGCTATCTC
AAAATCGTAAGGACCGCGTTCATCTAAAAAGACTGGGAGTGACAACAAAG
TTGCGTGATTGTGTATATGAATAGGGCGCCGTATCAGGAAAATTTAGTTT
TTGACTTTTCGGCGCACAACAAGATTTTCATTGTAGAATTTTCCGCGGGA
GGACTATTTTCCTCAGATAGTTAATTTTCAGGGGCTTTCAGAGGTTTACC
GTGCCCGAAAGAAAATTATGAGCAGCTGCTATCGGGTTACTTTGATCCAA
ATGCCGCAATTGCAAGTTGAAAATACACGCTGTTCTCTTTATACTATGAT
ACACATTTTAAGATTTAGCCACTATCCCGAGAAATCGTTCATTACCATAA
GTTAGATAGATAGATAGATAAACCTTCCCTTCCCTGCACAGGGAATAGGC
CCTATCCTAAGATAGAGATCACAGCGCTAGGTAGATAAAATAAAAAGCGA
AAAAAGGAAAAATTATGCAAATAAGTAACTAGATAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACTTGGAATTAATAATTTT
ACGCCAATCCAGACGATTCAAAGCTTTTTGATACCAGTCATTTTTTGACA
AACCAACCTTTTTCAAGCACTTATAAATTCAACCATAAGTTACCCGAGAA
AAACAGAGCATGAACACAATGCTTTGTTATCAACTTCATTTTTAGGAGAC
AAGGAGGAATCGGGAAGCTTTTCGTCGACCGTTCCATCAAGGATTTTTGG
ATGGTTTTTGGTGGGGATTTGTTAGTATGACTACTGTTGGGTAAGAACTT
TAATGTATTTATTGATTGTTCCTATGGGACCTATAGGGAATCAAAATGAT
GAAAATCGGGTGCATTTTCCAAACAGGAATAACTTATTGACTTATTCGTC
TTGCATAGGTATACTTTGACCATGTTCAGACGTTACGGTTCCGTATCGTT
CTGAAACGAAACGGAACGTCAAAAAAGAAGACGTTACGAAGCAAAAAGGA
ACAGCTCCGTTTTCTTGCTAAGAAACGTTCTGAAACAATATGACCATTCT
CGATCCGTAACGGAAGCCATACCGGAACGATGGGAAACACCTGAACATCT
GAACATGATCTTTGTTTCTTTATTCTTGATTATTTGTTGTTATACACACT
TTTTCTAAATTTTTTGAAATTTTCAGGCTTTAATGTTCCTAAAATGTTCT
TATTGTAATATGATATTAGCACATTTTATTCTTTTTGAGCCTGCAATGTT
CTCAATTATAAAACTTTGGTAGGAAAATTTCTATGGATATAAACTCCTGT
GTATAACGGTGCTTATTTCTATGTATTCTTGATTTAGTCTTGGTATTCTT
AGTTTGTTCTTAACTATTCGCTAGAGCTGAGCCTCTTTTTTAGATTGTTT
TTATGAATAGGTTTTGGAAAATTTTCAGCTTCGTGCTCTTATAAAATTGT
TCTTTGTAGTTACGGGGACAAAGTACCGATCACGTGGGTTGGTCGTTTAT
TTTCGTCTTTTTGGATCATCGGTGGAATCACTCTCTGCTCCATTTTGACT
GCTTCCATGACTGACGTCATCAATCACGTGACCTTACCCAAACAAGCTAC
CCTCTCTGGAAAAGTATTTTTCTCAATTTTTTTTTATTTAAGATCTCAGT
CAACTGGTATTGTGCATTCATATACACGGCGGCGCTCTTAATTTCCGTCA
ATACTNTCTCTGGAAAAGTATTTCTCTCTTACGTTCTGTCATTTTTTATT
TTTACTGGAATTGAGTATTCCTCTCTATGCACGTCCTTAATTTATGAAAG
CATAAAAAATATTTACAGCAAGAGAACTCGAGTGATAATTTGTCCATATT
TTTTCAGGTCGGTATTTTGGAGGGTCGTTTATTTGAAACTCAAATGGTGA
CGAGGAGCGGTGGAACTTTCCATGAGAGTAAGCGAAATGAAATACTTATG
ACAAATACCTACACAATTGGCAATGTTTGGGTCTACTTTTCAAATTGTTG
TCCCTGTAATGCATGACCCCAAATCTTTACCACACCATCACGCTAAAAAA
ATGTTTAATCACGCCCGATCAAGCCAGAAAAAAAGTCCAAATCACGCCAA
TACGCAAGCATCTTATGGGGGGGGGTCTTCTTAACAGTAAACATTTTCCA
TTCTCTTTCTATTCAGTGCCAACATTGAAAGATCTTCTCGACACGTTGGA
CAGCAATGAAATATCTGGTATGTTGAGATTGTTTTTCTAAACAAAGTTCG
CATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCTTTTATCTATA
ACTTTTGAAGGAATTCTTCAGTCTTTGAAAATGAAAGTTATAGCGCTTTT
CTAAAAAATCTTCATTTTTTTCTTCTTTATTTTCATCTTCGTTTTTATAA
TTTTTTTAAAGATTTTTTTATTTCAAATTGTTCCACACACAAATATCTCT
CCAACGATACCAAATTTATAAAGATTAAATAATTCCTTCAAAAGTTATAG
GCAAAAGAAAAAAGTGCACACTTATCGTGAATAGACTTTAGTTTCTTCTT
ATTTAAACAATCAATCACCCTGATATTCTTATAGAAATTATTCATATGAA
AAAAGGCGTGTTTATTCTGAGGTATTTTGCAAATTCACGTAAATTTTCGA
TTGAAAGTTTCGATGATGTAATATGAAAATGGCACTTAAAGTTTCCTGAT
ATTCTGTAAAGCTAAACAGATGACGTGTCGCAAACGTTTACTCGGTTTAT
TGGACATTGAATTTGTCAACTTAACGGTTTTGTTTTTAAATAAGAGTGAT
GTCGTTTGCTTATTCATCAATTTAAATTTTCAAGCTTTTTTATATTGAAT
TAACGCGAATGTGGAGCAAGATTGTTGAGAATGGGGAATAGAAAAACATT
TTTTGCCTATATCGTCTATATCAGCACACTATAACAATAGAAAGACACTG
TCCTGATATCAAACATGTGTCTGATATGAAATACGGGAACACTTATGTAA
AAATAAAACCTTTAAACTTGATTTTTTGTTCAATTTCACGAAAGTTTCGA
GTTATGGAGATTGCTTAAAAGGGTTTGTCAATTGCTTGAGCAAGAAAGCT
TGTTTGAATTAAAGAAGTTATTCTTTCGATATTTCATTAGGAATACTTTT
GGATTACATCACCAAAAACTACCTTCTTCCAAAAGCAATCACCAAGACAA
ATCGAGATAAAAATCTCTACCGTTCCACTTCCTTTCAATCGACTGCTCAT
AAATCTTACACATATGGCGCCTTATTCAGAGAAGAAAGGGACGCCAATTT
CTTCAGAAATGTGATTTATCAAACGGCAGATGGCGTGGAAATATGCTTCT
CCAGAGCTTTTAGGGACAAAGTAGGAAATCTTATTTCATATAATTTTTAA
CAGTTGTAGAAAAGACAACGAAAGAATCTTGTTTTTCTAACCATTACCCA
AGTTCGAAACAAAAATTTGATAGAAAAAAGAAATGAAATGTCTTTCTCGT
ATCCCCTGATCGATTTTAATCACCAAAAAACGTATTCATGAATCCCAAAG
ACAGGATTGCAGTGTGCTAAAGGGTGCTTAGAATTCACCTTTACCTGTTT
GACCTCGATTGAATGACAAATTAAAGTTCTTTCCGGAGATTTGAATCGGA
CGGCAAGGTGGAGTTTGTAAGGCTAAGTAAGAAATATTTTTTTAGATTTG
TCATAACATTTCAAATATTTTTCTCTCAGATGGATTACGTACCTCCCGCA
TTGTTTTCACCAGATTCGAAAATCTTCCAGCATTCGTGTTTCGTTTTCTT
TGCAATTCTCGTTTGTATCGGAATGTTTGGTATTTTGTACGAATGTCGCC
GGAAGAAGAAGAAGGAAGCGGTAATACCGGCTCAGGGAAGCAAAGAGTGA
AGTGAAATATCATATTAAGATTATTTTGCATAATTATGTTGTAAATAAAT
GTATATGAAATAAATGTAAAGGAAATCAAACT

Coding sequence (CDS) from alignment at scaffold_425:395045..401426-

>TCONS_00064890 ID=TCONS_00064890|Name=TCONS_00064890|organism=Clytia hemisphaerica|type=CDS|length=10752bp|location=Sequence derived from alignment at scaffold_425:395045..401426- (Clytia hemisphaerica)
ATGGATTACGTACCTCCCGCATTGTTTTCACCAGATTCGAAAATCTTCCA
GCATTCGTGTTTCGTTTTCTTTGCAATTCTCGTTTGTATCGGAATGTTTG
GTATTTTGTACGAATGTCGCCGGAAGAAGAAGAAGGAAGCGGTAATACCG
GCTCAGGGAAGCAAAGAGTGAGAATACTTTTGGATTACATCACCAAAAAC
TACCTTCTTCCAAAAGCAATCACCAAGACAAATCGAGATAAAAATCTCTA
CCGTTCCACTTCCTTTCAATCGACTGCTCATAAATCTTACACATATGGCG
CCTTATTCAGAGAAGAAAGGGACGCCAATTTCTTCAGAAATGTGATTTAT
CAAACGGCAGATGGCGTGGAAATATGCTTCTCCAGAGCTTTTAGGGACAA
ATGCCAACATTGAAAGATCTTCTCGACACGTTGGACAGCAATGAAATATC
TGGTCGGTATTTTGGAGGGTCGTTTATTTGAAACTCAAATGGTGACGAGG
AGCGGTGGAACTTTCCATGAGATTACGGGGACAAAGTACCGATCACGTGG
GTTGGTCGTTTATTTTCGTCTTTTTGGATCATCGGTGGAATCACTCTCTG
CTCCATTTTGACTGCTTCCATGACTGACGTCATCAATCACGTGACCTTAC
CCAAACAAGCTACCCTCTCTGGAAAAGAGACAAGGAGGAATCGGGAAGCT
TTTCGTCGACCGTTCCATCAAGGATTTTTGGATGGTTTTTGGTGGGGATT
TGTTAGTATGACTACTGTTGGCGTATATGGACATCCTTATAATAAACCAA
TGTTGTGGTTGCCTCAACTTCACGCAAATATACCGGACAACCTACAACGA
TACAACGGAATTCCTTCAACGGAAAAACAGTGGAACTGGACCCGTAGAAC
GAATCATATATCCGGTCTTAGGTGATCCTTCACAGAAAAAGTATTACGGA
ATGTATTTTGTACCGATGTATTATCTGGAAGAAGGACTTCTTATCACTTT
GAAGAAAACTTCTGGTGAAATTGTCACTGATCTGTTGTTTCGAATCGCTG
GCTTGTGGCCACTGTTGGTCATCTTTCTGCTCATGGCAGCGATATCCGGT
TTCATACTTTGGGCTGTTATGATGAACCTTGGCCACCGGACCCTGATTGT
AATTCTTACGGCCCATCTAGTCCGGTGTGATGGCCACGAGGAATGCCAGC
AAAAGTTCGAATTCAAAGCTAGCATGTGTCGACCAGATAAACCCCAAGGC
TGTCTCTATGGACCACCAAAGAATATATCACATTGTGAAGATTTATCAAT
TTCTACAATCATCAATGAGCCTTACACTACCTACTTTTTCCGTGATGGAT
TACGTACCTCCCGCATTGTTTTCACCAGATTCGAAAATCTTCCAGCATTC
GTGTTTCGTTTTCTTTGCAATTCTCGTTTGTATCGGAATGTTTGGTATTT
TGTACGAATGTCGCCGGAAGAAGAAGAAGGAAGCGGTAATACCGGCTCAG
GGAAGCAAAGAGTGAGAATACTTTTGGATTACATCACCAAAAACTACCTT
CTTCCAAAAGCAATCACCAAGACAAATCGAGATAAAAATCTCTACCGTTC
CACTTCCTTTCAATCGACTGCTCATAAATCTTACACATATGGCGCCTTAT
TCAGAGAAGAAAGGGACGCCAATTTCTTCAGAAATGTGATTTATCAAACG
GCAGATGGCGTGGAAATATGCTTCTCCAGAGCTTTTAGGGACAAATGCCA
ACATTGAAAGATCTTCTCGACACGTTGGACAGCAATGAAATATCTGGTCG
GTATTTTGGAGGGTCGTTTATTTGAAACTCAAATGGTGACGAGGAGCGGT
GGAACTTTCCATGAGATTACGGGGACAAAGTACCGATCACGTGGGTTGGT
CGTTTATTTTCGTCTTTTTGGATCATCGGTGGAATCACTCTCTGCTCCAT
TTTGACTGCTTCCATGACTGACGTCATCAATCACGTGACCTTACCCAAAC
AAGCTACCCTCTCTGGAAAAGAGACAAGGAGGAATCGGGAAGCTTTTCGT
CGACCGTTCCATCAAGGATTTTTGGATGGTTTTTGGTGGGGATTTGTTAG
TATGACTACTGTTGGCGTATATGGACATCCTTATAATAAACCAATGTTGT
GGTTGCCTCAACTTCACGCAAATATACCGGACAACCTACAACGATACAAC
GGAATTCCTTCAACGGAAAAACAGTGGAACTGGACCCGTAGAACGAATCA
TATATCCGGTCTTAGGTGATCCTTCACAGAAAAAGTATTACGGAATGTAT
TTTGTACCGATGTATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAA
AACTTCTGGTGAAATTGTCACTGATCTGTTGTTTCGAATCGCTGGCTTGT
GGCCACTGTTGGTCATCTTTCTGCTCATGGCAGCGATATCCGGTTTCATA
CTTTGGGCTGTTATGATGAACCTTGGCCACCGGACCCTGATTGTAATTCT
TACGGCCCATCTAGTCCGGTGTGATGGCCACGAGGAATGCCAGCAAAAGT
TCGAATTCAAAGCTAGCATGTGTCGACCAGATAAACCCCAAGGCTGTCTC
TATGGACCACCAAAGAATATATCACATTGTGAAGATTTATCAATTTCTAC
AATCATCAATGAGCCTTACACTACCTACTTTTTCCGTGATGGATTACGTA
CCTCCCGCATTGTTTTCACCAGATTCGAAAATCTTCCAGCATTCGTGTTT
CGTTTTCTTTGCAATTCTCGTTTGTATCGGAATGTTTGGTATTTTGTACG
AATGTCGCCGGAAGAAGAAGAAGGAAGCGGTAATACCGGCTCAGGGAAGC
AAAGAGTGAGAATACTTTTGGATTACATCACCAAAAACTACCTTCTTCCA
AAAGCAATCACCAAGACAAATCGAGATAAAAATCTCTACCGTTCCACTTC
CTTTCAATCGACTGCTCATAAATCTTACACATATGGCGCCTTATTCAGAG
AAGAAAGGGACGCCAATTTCTTCAGAAATGTGATTTATCAAACGGCAGAT
GGCGTGGAAATATGCTTCTCCAGAGCTTTTAGGGACAAATGCCAACATTG
AAAGATCTTCTCGACACGTTGGACAGCAATGAAATATCTGGTCGGTATTT
TGGAGGGTCGTTTATTTGAAACTCAAATGGTGACGAGGAGCGGTGGAACT
TTCCATGAGATTACGGGGACAAAGTACCGATCACGTGGGTTGGTCGTTTA
TTTTCGTCTTTTTGGATCATCGGTGGAATCACTCTCTGCTCCATTTTGAC
TGCTTCCATGACTGACGTCATCAATCACGTGACCTTACCCAAACAAGCTA
CCCTCTCTGGAAAAGAGACAAGGAGGAATCGGGAAGCTTTTCGTCGACCG
TTCCATCAAGGATTTTTGGATGGTTTTTGGTGGGGATTTGTTAGTATGAC
TACTGTTGGCGTATATGGACATCCTTATAATAAACCAATGTTGTGGTTGC
CTCAACTTCACGCAAATATACCGGACAACCTACAACGATACAACGGAATT
CCTTCAACGGAAAAACAGTGGAACTGGACCCGTAGAACGAATCATATATC
CGGTCTTAGGTGATCCTTCACAGAAAAAGTATTACGGAATGTATTTTGTA
CCGATGTATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAAAACTTC
TGGTGAAATTGTCACTGATCTGTTGTTTCGAATCGCTGGCTTGTGGCCAC
TGTTGGTCATCTTTCTGCTCATGGCAGCGATATCCGGTTTCATACTTTGG
GCTGTTATGATGAACCTTGGCCACCGGACCCTGATTGTAATTCTTACGGC
CCATCTAGTCCGGTGTGATGGCCACGAGGAATGCCAGCAAAAGTTCGAAT
TCAAAGCTAGCATGTGTCGACCAGATAAACCCCAAGGCTGTCTCTATGGA
CCACCAAAGAATATATCACATTGTGAAGATTTATCAATTTCTACAATCAT
CAATGAGCCTTACACTACCTACTTTTTCCGTGATGGATTACGTACCTCCC
GCATTGTTTTCACCAGATTCGAAAATCTTCCAGCATTCGTGTTTCGTTTT
CTTTGCAATTCTCGTTTGTATCGGAATGTTTGGTATTTTGTACGAATGTC
GCCGGAAGAAGAAGAAGGAAGCGGTAATACCGGCTCAGGGAAGCAAAGAG
TGAGAATACTTTTGGATTACATCACCAAAAACTACCTTCTTCCAAAAGCA
ATCACCAAGACAAATCGAGATAAAAATCTCTACCGTTCCACTTCCTTTCA
ATCGACTGCTCATAAATCTTACACATATGGCGCCTTATTCAGAGAAGAAA
GGGACGCCAATTTCTTCAGAAATGTGATTTATCAAACGGCAGATGGCGTG
GAAATATGCTTCTCCAGAGCTTTTAGGGACAAATGCCAACATTGAAAGAT
CTTCTCGACACGTTGGACAGCAATGAAATATCTGGTCGGTATTTTGGAGG
GTCGTTTATTTGAAACTCAAATGGTGACGAGGAGCGGTGGAACTTTCCAT
GAGATTACGGGGACAAAGTACCGATCACGTGGGTTGGTCGTTTATTTTCG
TCTTTTTGGATCATCGGTGGAATCACTCTCTGCTCCATTTTGACTGCTTC
CATGACTGACGTCATCAATCACGTGACCTTACCCAAACAAGCTACCCTCT
CTGGAAAAGAGACAAGGAGGAATCGGGAAGCTTTTCGTCGACCGTTCCAT
CAAGGATTTTTGGATGGTTTTTGGTGGGGATTTGTTAGTATGACTACTGT
TGGCGTATATGGACATCCTTATAATAAACCAATGTTGTGGTTGCCTCAAC
TTCACGCAAATATACCGGACAACCTACAACGATACAACGGAATTCCTTCA
ACGGAAAAACAGTGGAACTGGACCCGTAGAACGAATCATATATCCGGTCT
TAGGTGATCCTTCACAGAAAAAGTATTACGGAATGTATTTTGTACCGATG
TATTATCTGGAAGAAGGACTTCTTATCACTTTGAAGAAAACTTCTGGTGA
AATTGTCACTGATCTGTTGTTTCGAATCGCTGGCTTGTGGCCACTGTTGG
TCATCTTTCTGCTCATGGCAGCGATATCCGGTTTCATACTTTGGGCTGTT
ATGATGAACCTTGGCCACCGGACCCTGATTGTAATTCTTACGGCCCATCT
AGTCCGGTGTGATGGCCACGAGGAATGCCAGCAAAAGTTCGAATTCAAAG
CTAGCATGTGTCGACCAGATAAACCCCAAGGCTGTCTCTATGGACCACCA
AAGAATATATCACATTGTGAAGATTTATCAATTTCTACAATCATCAATGA
GCCTTACACTACCTACTTTTTCCGTGATGGATTACGTACCTCCCGCATTG
TTTTCACCAGATTCGAAAATCTTCCAGCATTCGTGTTTCGTTTTCTTTGC
AATTCTCGTTTGTATCGGAATGTTTGGTATTTTGTACGAATGTCGCCGGA
AGAAGAAGAAGGAAGCGGTAATACCGGCTCAGGGAAGCAAAGAGTGAGAA
TACTTTTGGATTACATCACCAAAAACTACCTTCTTCCAAAAGCAATCACC
AAGACAAATCGAGATAAAAATCTCTACCGTTCCACTTCCTTTCAATCGAC
TGCTCATAAATCTTACACATATGGCGCCTTATTCAGAGAAGAAAGGGACG
CCAATTTCTTCAGAAATGTGATTTATCAAACGGCAGATGGCGTGGAAATA
TGCTTCTCCAGAGCTTTTAGGGACAAATGCCAACATTGAAAGATCTTCTC
GACACGTTGGACAGCAATGAAATATCTGGTCGGTATTTTGGAGGGTCGTT
TATTTGAAACTCAAATGGTGACGAGGAGCGGTGGAACTTTCCATGAGATT
ACGGGGACAAAGTACCGATCACGTGGGTTGGTCGTTTATTTTCGTCTTTT
TGGATCATCGGTGGAATCACTCTCTGCTCCATTTTGACTGCTTCCATGAC
TGACGTCATCAATCACGTGACCTTACCCAAACAAGCTACCCTCTCTGGAA
AAGAGACAAGGAGGAATCGGGAAGCTTTTCGTCGACCGTTCCATCAAGGA
TTTTTGGATGGTTTTTGGTGGGGATTTGTTAGTATGACTACTGTTGGCGT
ATATGGACATCCTTATAATAAACCAATGTTGTGGTTGCCTCAACTTCACG
CAAATATACCGGACAACCTACAACGATACAACGGAATTCCTTCAACGGAA
AAACAGTGGAACTGGACCCGTAGAACGAATCATATATCCGGTCTTAGGTG
ATCCTTCACAGAAAAAGTATTACGGAATGTATTTTGTACCGATGTATTAT
CTGGAAGAAGGACTTCTTATCACTTTGAAGAAAACTTCTGGTGAAATTGT
CACTGATCTGTTGTTTCGAATCGCTGGCTTGTGGCCACTGTTGGTCATCT
TTCTGCTCATGGCAGCGATATCCGGTTTCATACTTTGGGCTGTTATGATG
AACCTTGGCCACCGGACCCTGATTGTAATTCTTACGGCCCATCTAGTCCG
GTGTGATGGCCACGAGGAATGCCAGCAAAAGTTCGAATTCAAAGCTAGCA
TGTGTCGACCAGATAAACCCCAAGGCTGTCTCTATGGACCACCAAAGAAT
ATATCACATTGTGAAGATTTATCAATTTCTACAATCATCAATGAGCCTTA
CACTACCTACTTTTTCCGTGATGGATTACGTACCTCCCGCATTGTTTTCA
CCAGATTCGAAAATCTTCCAGCATTCGTGTTTCGTTTTCTTTGCAATTCT
CGTTTGTATCGGAATGTTTGGTATTTTGTACGAATGTCGCCGGAAGAAGA
AGAAGGAAGCGGTAATACCGGCTCAGGGAAGCAAAGAGTGAGAATACTTT
TGGATTACATCACCAAAAACTACCTTCTTCCAAAAGCAATCACCAAGACA
AATCGAGATAAAAATCTCTACCGTTCCACTTCCTTTCAATCGACTGCTCA
TAAATCTTACACATATGGCGCCTTATTCAGAGAAGAAAGGGACGCCAATT
TCTTCAGAAATGTGATTTATCAAACGGCAGATGGCGTGGAAATATGCTTC
TCCAGAGCTTTTAGGGACAAATGCCAACATTGAAAGATCTTCTCGACACG
TTGGACAGCAATGAAATATCTGGTCGGTATTTTGGAGGGTCGTTTATTTG
AAACTCAAATGGTGACGAGGAGCGGTGGAACTTTCCATGAGATTACGGGG
ACAAAGTACCGATCACGTGGGTTGGTCGTTTATTTTCGTCTTTTTGGATC
ATCGGTGGAATCACTCTCTGCTCCATTTTGACTGCTTCCATGACTGACGT
CATCAATCACGTGACCTTACCCAAACAAGCTACCCTCTCTGGAAAAGAGA
CAAGGAGGAATCGGGAAGCTTTTCGTCGACCGTTCCATCAAGGATTTTTG
GATGGTTTTTGGTGGGGATTTGTTAGTATGACTACTGTTGGCGTATATGG
ACATCCTTATAATAAACCAATGTTGTGGTTGCCTCAACTTCACGCAAATA
TACCGGACAACCTACAACGATACAACGGAATTCCTTCAACGGAAAAACAG
TGGAACTGGACCCGTAGAACGAATCATATATCCGGTCTTAGGTGATCCTT
CACAGAAAAAGTATTACGGAATGTATTTTGTACCGATGTATTATCTGGAA
GAAGGACTTCTTATCACTTTGAAGAAAACTTCTGGTGAAATTGTCACTGA
TCTGTTGTTTCGAATCGCTGGCTTGTGGCCACTGTTGGTCATCTTTCTGC
TCATGGCAGCGATATCCGGTTTCATACTTTGGGCTGTTATGATGAACCTT
GGCCACCGGACCCTGATTGTAATTCTTACGGCCCATCTAGTCCGGTGTGA
TGGCCACGAGGAATGCCAGCAAAAGTTCGAATTCAAAGCTAGCATGTGTC
GACCAGATAAACCCCAAGGCTGTCTCTATGGACCACCAAAGAATATATCA
CATTGTGAAGATTTATCAATTTCTACAATCATCAATGAGCCTTACACTAC
CTACTTTTTCCGTGATGGATTACGTACCTCCCGCATTGTTTTCACCAGAT
TCGAAAATCTTCCAGCATTCGTGTTTCGTTTTCTTTGCAATTCTCGTTTG
TATCGGAATGTTTGGTATTTTGTACGAATGTCGCCGGAAGAAGAAGAAGG
AAGCGGTAATACCGGCTCAGGGAAGCAAAGAGTGAGAATACTTTTGGATT
ACATCACCAAAAACTACCTTCTTCCAAAAGCAATCACCAAGACAAATCGA
GATAAAAATCTCTACCGTTCCACTTCCTTTCAATCGACTGCTCATAAATC
TTACACATATGGCGCCTTATTCAGAGAAGAAAGGGACGCCAATTTCTTCA
GAAATGTGATTTATCAAACGGCAGATGGCGTGGAAATATGCTTCTCCAGA
GCTTTTAGGGACAAATGCCAACATTGAAAGATCTTCTCGACACGTTGGAC
AGCAATGAAATATCTGGTCGGTATTTTGGAGGGTCGTTTATTTGAAACTC
AAATGGTGACGAGGAGCGGTGGAACTTTCCATGAGATTACGGGGACAAAG
TACCGATCACGTGGGTTGGTCGTTTATTTTCGTCTTTTTGGATCATCGGT
GGAATCACTCTCTGCTCCATTTTGACTGCTTCCATGACTGACGTCATCAA
TCACGTGACCTTACCCAAACAAGCTACCCTCTCTGGAAAAGAGACAAGGA
GGAATCGGGAAGCTTTTCGTCGACCGTTCCATCAAGGATTTTTGGATGGT
TTTTGGTGGGGATTTGTTAGTATGACTACTGTTGGCGTATATGGACATCC
TTATAATAAACCAATGTTGTGGTTGCCTCAACTTCACGCAAATATACCGG
ACAACCTACAACGATACAACGGAATTCCTTCAACGGAAAAACAGTGGAAC
TGGACCCGTAGAACGAATCATATATCCGGTCTTAGGTGATCCTTCACAGA
AAAAGTATTACGGAATGTATTTTGTACCGATGTATTATCTGGAAGAAGGA
CTTCTTATCACTTTGAAGAAAACTTCTGGTGAAATTGTCACTGATCTGTT
GTTTCGAATCGCTGGCTTGTGGCCACTGTTGGTCATCTTTCTGCTCATGG
CAGCGATATCCGGTTTCATACTTTGGGCTGTTATGATGAACCTTGGCCAC
CGGACCCTGATTGTAATTCTTACGGCCCATCTAGTCCGGTGTGATGGCCA
CGAGGAATGCCAGCAAAAGTTCGAATTCAAAGCTAGCATGTGTCGACCAG
ATAAACCCCAAGGCTGTCTCTATGGACCACCAAAGAATATATCACATTGT
GAAGATTTATCAATTTCTACAATCATCAATGAGCCTTACACTACCTACTT
TTTCCGTGATGGATTACGTACCTCCCGCATTGTTTTCACCAGATTCGAAA
ATCTTCCAGCATTCGTGTTTCGTTTTCTTTGCAATTCTCGTTTGTATCGG
AATGTTTGGTATTTTGTACGAATGTCGCCGGAAGAAGAAGAAGGAAGCGG
TAATACCGGCTCAGGGAAGCAAAGAGTGAGAATACTTTTGGATTACATCA
CCAAAAACTACCTTCTTCCAAAAGCAATCACCAAGACAAATCGAGATAAA
AATCTCTACCGTTCCACTTCCTTTCAATCGACTGCTCATAAATCTTACAC
ATATGGCGCCTTATTCAGAGAAGAAAGGGACGCCAATTTCTTCAGAAATG
TGATTTATCAAACGGCAGATGGCGTGGAAATATGCTTCTCCAGAGCTTTT
AGGGACAAATGCCAACATTGAAAGATCTTCTCGACACGTTGGACAGCAAT
GAAATATCTGGTCGGTATTTTGGAGGGTCGTTTATTTGAAACTCAAATGG
TGACGAGGAGCGGTGGAACTTTCCATGAGATTACGGGGACAAAGTACCGA
TCACGTGGGTTGGTCGTTTATTTTCGTCTTTTTGGATCATCGGTGGAATC
ACTCTCTGCTCCATTTTGACTGCTTCCATGACTGACGTCATCAATCACGT
GACCTTACCCAAACAAGCTACCCTCTCTGGAAAAGAGACAAGGAGGAATC
GGGAAGCTTTTCGTCGACCGTTCCATCAAGGATTTTTGGATGGTTTTTGG
TGGGGATTTGTTAGTATGACTACTGTTGGCGTATATGGACATCCTTATAA
TAAACCAATGTTGTGGTTGCCTCAACTTCACGCAAATATACCGGACAACC
TACAACGATACAACGGAATTCCTTCAACGGAAAAACAGTGGAACTGGACC
CGTAGAACGAATCATATATCCGGTCTTAGGTGATCCTTCACAGAAAAAGT
ATTACGGAATGTATTTTGTACCGATGTATTATCTGGAAGAAGGACTTCTT
ATCACTTTGAAGAAAACTTCTGGTGAAATTGTCACTGATCTGTTGTTTCG
AATCGCTGGCTTGTGGCCACTGTTGGTCATCTTTCTGCTCATGGCAGCGA
TATCCGGTTTCATACTTTGGGCTGTTATGATGAACCTTGGCCACCGGACC
CTGATTGTAATTCTTACGGCCCATCTAGTCCGGTGTGATGGCCACGAGGA
ATGCCAGCAAAAGTTCGAATTCAAAGCTAGCATGTGTCGACCAGATAAAC
CCCAAGGCTGTCTCTATGGACCACCAAAGAATATATCACATTGTGAAGAT
TTATCAATTTCTACAATCATCAATGAGCCTTACACTACCTACTTTTTCCG
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040695XLOC_040695Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064890-exon-scaffold_425-1575043694:401129..401426TCONS_00064890-exon-scaffold_425-1575043694:401129..401426Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:399296..399642TCONS_00064890-exon-scaffold_425-1575043694:399296..399642Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:398237..398331TCONS_00064890-exon-scaffold_425-1575043694:398237..398331Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:397414..397567TCONS_00064890-exon-scaffold_425-1575043694:397414..397567Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:397100..397169TCONS_00064890-exon-scaffold_425-1575043694:397100..397169Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:396810..396860TCONS_00064890-exon-scaffold_425-1575043694:396810..396860Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:395657..395886TCONS_00064890-exon-scaffold_425-1575043694:395657..395886Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1575043694:395045..395297TCONS_00064890-exon-scaffold_425-1575043694:395045..395297Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:401129..401426TCONS_00064890-exon-scaffold_425-1510915933:401129..401426Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:399296..399642TCONS_00064890-exon-scaffold_425-1510915933:399296..399642Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:398237..398331TCONS_00064890-exon-scaffold_425-1510915933:398237..398331Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:397414..397567TCONS_00064890-exon-scaffold_425-1510915933:397414..397567Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:397100..397169TCONS_00064890-exon-scaffold_425-1510915933:397100..397169Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:396810..396860TCONS_00064890-exon-scaffold_425-1510915933:396810..396860Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:395657..395886TCONS_00064890-exon-scaffold_425-1510915933:395657..395886Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1510915933:395045..395297TCONS_00064890-exon-scaffold_425-1510915933:395045..395297Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:401129..401426TCONS_00064890-exon-scaffold_425-1491911889:401129..401426Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:399296..399642TCONS_00064890-exon-scaffold_425-1491911889:399296..399642Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:398237..398331TCONS_00064890-exon-scaffold_425-1491911889:398237..398331Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:397414..397567TCONS_00064890-exon-scaffold_425-1491911889:397414..397567Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:397100..397169TCONS_00064890-exon-scaffold_425-1491911889:397100..397169Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:396810..396860TCONS_00064890-exon-scaffold_425-1491911889:396810..396860Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:395657..395886TCONS_00064890-exon-scaffold_425-1491911889:395657..395886Clytia hemisphaericaexon
TCONS_00064890-exon-scaffold_425-1491911889:395045..395297TCONS_00064890-exon-scaffold_425-1491911889:395045..395297Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064890-proteinTCONS_00064890-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:395045..401426 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0275235	0.107359	0.0717063	0.0319988	0.921971	0.889615	0.601558	0.316634	0.115967	0.373475	0.27885	0.0366609	0.760537	0.6951	0.168982	0.130013	0.390777	0.201337	1.64813	2.12274	0.88913	1.45796	1.59661	2.32887	4.23308	6.09427	0.409234	0	0	0.0311245
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064890 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top