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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064772 ID=TCONS_00064772|Name=TCONS_00064772|organism=Clytia hemisphaerica|type=transcript|length=1129bp
TTTGTATGGAAATTACCTAATCAAACCAATATCTTCTTCTTCACTGAAAC
GAAGAGCATCGTAAAGTGAGAGCTAAAACAGTTTGAAATTATGGTTGTTG
GtgaaatgattgagaaatttcGGAAAACATCTATCGAGAAGATTCGGAAG
ACATCAGTAGAGAAACTGGAACGACTTCGGAAGACTTCGCGCGGACGAAG
TAACCGCCGTACATCACGAGGAGAGTCATGTTCATGTATTGAATATCGTG
GGACGTTCAAGTTGATGGTGCTTGGAGATCAAGGTGTGGGGAAAAGTTCA
ATTTGTGCCAAATACACCTCAGTGGATGAAGAAATATTACAAGCATTTGA
TGAAGAGAGTGGAGAGAGGCAGCCCCGCGACGAACTCTTTACAAGCTGTA
TTTATTTGAGTTCTGTTAACAGGAAAATTAAGCAATACGATTTGGAAATC
GCTATTCCGAATGGAGTTTATTGGAATGGAACAGTCAACGGATACAAAGA
AAGAATCAGTCAGACGAACGGCTTCATGTTGGTTTACTCAAAAGAAAATC
GGCAAAGTTACATGAGGCTAATCGAACTTTTATCAGAcattagaaaaatc
aaaaagatggCCGAGCTTCCAATCATCATTGTTGGTAATAAATCAGACTT
GAATGATATTAAAACATTGCAAGTGAAAGATTGTGAGCATATAGTTTTGG
GTGAATATCCACACTTTGATGTATCTGCAATGCAAAATGAAGGTATCCAA
GAAGCTTTCAAACAACTTTCAGTCAACTGTTCGCACGTgtttgatgaaga
tgaagaaactATTGAAGAGACTGGGGAAGAGAATGTCAAAGAAATAGACT
GATCAAATTGATCGTCGGTTGccgtaaaaaaattaatcgactGGACGCTT
AAAAAGAAAGCATTACAAAGTCAAAGTAACATTTTTGTCTGAGCCCTGAA
AAATTTATGGATTGTCGGAGAGGGAATGCAACAGTTTCTATTTTTAATTG
TCGATATTGAATAAATAATTAATAGttgtagcacttttctacaagatctt
catttttttcttcttcattttcatcttcatttttagaattttttaaaaga
tatttttatttcaaattgttccacttcac Run BLAST on NCBI transcript from alignment at scaffold_423:195376..198105- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064772 ID=TCONS_00064772|Name=TCONS_00064772|organism=Clytia hemisphaerica|type=transcript|length=2730bp|location=Sequence derived from alignment at scaffold_423:195376..198105- (Clytia hemisphaerica)
TTTGTATGGAAATTACCTAATCAAACCAATATCTTCTTCTTCACTGAAAC
GAAGAGCATCGTAAAGTGAGGTTTGTAGTTAATTCTTTTTTCTAACCTTG
TCAAATGGCGTTTTAAGCTGCATAAACAAAAATTGGATGGATATCAATTT
TTCATGATACAATCTGTTTCTCGTTTTTGAAGTTCAAAATAACTCCTCTA
GATTTGAAATTTCACTAAGGAAAATTAAGCTTATTGTCAGAAACTCTTGA
TTTGTCGACTTGTATTTGAAAGCAGGATGTAAACTATCACAAACTATGAT
GTCATTTTTGACCACTTGTCTCTGTTTATTTTTCNATGTAATAAGCATAA
ACTATGCCTGGATGCTTTGAGAACTTAAGCATACACGAGCCTGACCAAGG
GGCATACACTTGCTTATAAAAAAAAAACATGTAGATTTGAAATTTCACTA
AGGAAAATGAAGCTTATTGTCAGAAACTCTTGATTTGTCGACTTGTATTT
GAAAGCAGGATGTAAACTATCACAAGCTATGATGTCATTTTTGACCACTT
GTCTCTGTTTATTTTTCCACTATCAATCCAATGCCAAGTAAAATAGTCTC
ATCTCACATAAGTTTTTTTCTTGCTCTACTGATTTGTGTGATGTGGTGAT
CATCTAATGAAGTGATAACTCATTTTTGGACTCTGTCTTTTAGTTTTGTA
AAGTCTATTCTCTGTGTTTTCATTTTAATAGTTGAAGGCTTCACACTTCT
TGACTATAAATTACATTTTTATATTGCTCTCTAGAGCTAAAACAGTTTGA
CATTATGGTTGTTGGTGAAATGATTGAGAAATTTCGGAAAACATCTATCG
AGAAGATTCGGAAGACATCAGTAGAGAAACTGGAACGACTTCGGAAGACT
TCGCGCGGACGAAGTAACCGCCGTACATCACGAGGAGAGTCATGTTCATG
TATTGAATATNCTAATATATTCAATTCCAAGAGGAAAGAATATTTTATAA
CATGTTATTTTTACTTCACAGTATGAGAAGATACAACTATTTTTACGGAA
GTTATGAAAAGTGACGAATTTTTCGTAATTAATGACAACGGAAAGTCATT
AAAGCTGTTAATTAGACAACTTTGTATGGAAATTACCTAATCAAACCAAT
ATCTTCTTCTTCACTGAAACGAAGAGCATCGTAAAGTGAGGTTTGTAGTT
AATTCTTTTTTCTAACCTTGTCAAATGGCGTTTTAAGCTGCATGAACAAA
AATTGGATGGATATCAATTTTTCATGATACAATCTGTTTCTCGTTTTTGA
AGTTCAAAATAACTCCTCTAGATTTGAAATTTCACTAAGGAAAATTAAGC
TTATTGTCAGAAACTCTTGATTTGTCGACTTGTATTTGAAAGCAGGATGT
AAACTATCACAAACTATGATGTCATTTTTGACCACTTGTCTCTGTTTATT
TTTCCACTATCAATCCAATGCCAAGTAAAATAGTATCATCTCTCGTAACT
TTTTTTCTTGCTCTACTGATTTGTGTGATGTGGTGATCATCTAATGAAGT
GATAACTCATTTTTGGACTCTATCTTTTAGTTTCGTAAAGTCTATTCTCT
GTGTTTTCATTTTAATAGTTGAAGGCTTCATACTTCTTGACTATAAATTA
CATTTTTATATTGCTCTCTAGAGCTAAAACAGTTTGAAATTATGGTTGTT
GGTGAAATGATTGAGAAATTTCGGAAAACATCTATCGAGAAGATTCGGAA
GACATCAGTAGAGAAACTGGAACGACTTCGGAAGACTTCGCGCGGACGAA
GTAACCGCCGTACATCACGAGGAGAGTCATGTTCATGTATTGAATATCGT
GGGACGTTCAAGTTGATGGTGCTTGGAGATCAAGGTGTGGGGAAAAGTTC
AATTTGTGCCAAATACACCTCAGTGGATGAAGAAATATTACAAGCATTTG
ATGAAGAGAGTGGAGAGAGGCAGCCCCGCGACGAACTCTTTACAAGCTGT
ATTTATTTGAGTTCTGTTAACAGGAAAATTAAGCAATACGATTTGGAAAT
CGCTATTCCGAATGGAGTTTATTGGAATGGAACAGTCAACGGATACAAAG
AAAGAATCAGTCAGACGAACGGCTTCATGTTGGTTTACTCAAAAGAAAAT
CGGCAAAGTTACATGAGGCTAATCGAACTTTTATCAGACATTAGAAAAAT
CAAAAAGATGGCCGAGCTTCCAATCATCATTGTTGGTAATAAATCAGACT
TGAATGATATTAAAACATTGCAAGTGAAAGATTGTGAGCATATAGTTTTG
GGTGAATATCCACACTTTGATGTATCTGCAATGCAAAATGAAGGTATCCA
AGAAGCTTTCAAACAACTTTCAGTCAACTGTTCGCACGTGTTTGATGAAG
ATGAAGAAACTATTGAAGAGACTGGGGAAGAGAATGTCAAAGAAATAGAC
TGATCAAATTGATCGTCGGTTGCCGTAAAAAAATTAATCGACTGGACGCT
TAAAAAGAAAGCATTACAAAGTCAAAGTAACATTTTTGTCTGAGCCCTGA
AAAATTTATGGATTGTCGGAGAGGGAATGCAACAGTTTCTATTTTTAATT
GTCGATATTGAATAAATAATTAATAGTTGTAGCACTTTTCTACAAGATCT
TCATTTTTTTCTTCTTCATTTTCATCTTCATTTTTAGAATTTTTTAAAAG
ATATTTTTATTTCAAATTGTTCCACTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064772-exon-scaffold_423-1575043694:198036..198105 | TCONS_00064772-exon-scaffold_423-1575043694:198036..198105 | Clytia hemisphaerica | exon |
| TCONS_00064772-exon-scaffold_423-1575043694:195376..196434 | TCONS_00064772-exon-scaffold_423-1575043694:195376..196434 | Clytia hemisphaerica | exon |
| TCONS_00064772-exon-scaffold_423-1510915933:198036..198105 | TCONS_00064772-exon-scaffold_423-1510915933:198036..198105 | Clytia hemisphaerica | exon |
| TCONS_00064772-exon-scaffold_423-1510915933:195376..196434 | TCONS_00064772-exon-scaffold_423-1510915933:195376..196434 | Clytia hemisphaerica | exon |
| TCONS_00064772-exon-scaffold_423-1491911889:198036..198105 | TCONS_00064772-exon-scaffold_423-1491911889:198036..198105 | Clytia hemisphaerica | exon |
| TCONS_00064772-exon-scaffold_423-1491911889:195376..196434 | TCONS_00064772-exon-scaffold_423-1491911889:195376..196434 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:195376..198105 - |
Blast
The following BLAST results are available for this feature:
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