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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064729 ID=TCONS_00064729|Name=TCONS_00064729|organism=Clytia hemisphaerica|type=transcript|length=279bp
CAGGATGTTTGCAACCAGTAAAGCCAGACAAACATACGTAGAAAATCCTT
CAGTGTCTTTAGAAATATAAATATCATAATATTGAGGTATGTATGTAGGG
TACCACGCCACCAAAGATCATTGCACCAGAGGCTGTCCATGACACCAGAG
TCATTAGATTGATTGCTGACCAATCTTCATGACTAAATCGCTCTTTCACA
GCATGTGCAAACTCAGCAACCTTGTTTGATgccattatttttttttgaaa
tttcaatttcaagtgtttttcatttgttt Run BLAST on NCBI transcript from alignment at scaffold_423:152732..154850+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064729 ID=TCONS_00064729|Name=TCONS_00064729|organism=Clytia hemisphaerica|type=transcript|length=2119bp|location=Sequence derived from alignment at scaffold_423:152732..154850+ (Clytia hemisphaerica)
CAGGATGTTTGCAACCAGTAAAGCCAGACAAACATACGTAGAAAATCCTT
CAGTGTCTTTAGAAATATAAATATCATAATATTGAGGTATGTAGGGTACC
ACGCCACCAAAGATCATTGCACCAGAGGCTGTCCATGACACCAGAGTCAT
TAGATTGATTGCTGACCAATCTTCATGACTAAATCGCTCTTTCACAGCAT
GTGCAAACTCAGCAACCTTGTTTGATgccattatttttttttgaaatttc
aatttcaagtgtttttcatttgtttattttttcagacTAAAATGATCCAA
AAATGACATTATGAATGATAGAAAACATTTATGAATTgccaaatgttttt
ttccaaaaaaaaattcctttccacacgtcagcaatctactttttataaat
ataaaaactagattgtaaggaagattctaaaaaaaaaagctgttttctta
gacgactaCGATATAGATAGTCCCAGgcagccttatccctccttcagtaa
agcttcctataccttttttcccttcagaaaaaccaaacatattggcctta
attgtttgcttttaattgtatttctattttaaataTTCCGCGCatgtttt
tcaatagagatgtcacatgactcaaatcctgcagtcttattggactagcg
AAAGTGAAATTGCGCGATCTGATTGTATGAAAAAAGACCGTGTGAActgg
aaccgaaaataattctcattctaaaacaaaatggcagcgagaaaagcacg
tcttttacTTTGGACAAAAGGCTGTAAATTCTAAtggattttaaggtttt
atcttatcttatctcatttactttaattagtagaggcttcttcaacgTTT
GGGGAAtgtaagtctataaaagttatttatttttcggtggaaaaaagtgt
ttaaaaaagcattttttgtgctcNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCTTCATATTTTGGCCATCAGAGCCTTCGTTTTCATAtg
gtttattcttataaaaattcctATACTCACCAAAATAATATCCTCAGGAT
GTTTGCAACCAGTAAAGCCAGACAAACATACGTAGAAAATCCTTCAGTGT
CTTTAGAAATATAAATATCATAATATTGAGGTATGTAGGGTACCACGCCA
CCAAAGATCATTGCACCAGAGGCTGTCCATGACACCAGAGTCATTAGATT
GATTGCTGACCAATCTTCATGACTAAATCGCTCTTTCACAGCATGTGCAA
ACTCAGCAACCTTGTTTGATgccattatttttttttgaaatttcaatttc
aagtgtttttcatttgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064729-exon-scaffold_423-1491911889:152732..152821 | TCONS_00064729-exon-scaffold_423-1491911889:152732..152821 | Clytia hemisphaerica | exon |
| TCONS_00064729-exon-scaffold_423-1510915933:152732..152821 | TCONS_00064729-exon-scaffold_423-1510915933:152732..152821 | Clytia hemisphaerica | exon |
| TCONS_00064729-exon-scaffold_423-1575043694:152732..152821 | TCONS_00064729-exon-scaffold_423-1575043694:152732..152821 | Clytia hemisphaerica | exon |
| TCONS_00064729-exon-scaffold_423-1491911889:154662..154850 | TCONS_00064729-exon-scaffold_423-1491911889:154662..154850 | Clytia hemisphaerica | exon |
| TCONS_00064729-exon-scaffold_423-1510915933:154662..154850 | TCONS_00064729-exon-scaffold_423-1510915933:154662..154850 | Clytia hemisphaerica | exon |
| TCONS_00064729-exon-scaffold_423-1575043694:154662..154850 | TCONS_00064729-exon-scaffold_423-1575043694:154662..154850 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:152732..154850 + |
Blast
The following BLAST results are available for this feature:
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