TCONS_00064716 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064716
Unique NameTCONS_00064716
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2066

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064716 ID=TCONS_00064716|Name=TCONS_00064716|organism=Clytia hemisphaerica|type=transcript|length=2066bp
GGCACCAAAGAATACGAATATCCATCAATGTCAACTCAAGAAGACATCAA
ACGAATTTTGTGGATGTTCAATGATTTCTTACTCAAAGATGGTACATTTG
CACAAAAAGCTTTTCTTCTCATGTCGGATACAGACCGTAAGTTCTCGTCT
TCGGctctaaaatgttgtttttacaTCACACTGGCAAGAAAACTTGGCCT
CGATGTCAATGCTGTTAGGattgaTGATACCAGTGCtcgaaaaagtcaat
tttttacaTCAATAAAACCAAGCATCGGGTATCTAATTCTTGTTGACTTT
ATTATACCTACTGAGTGCGCCAAGAGAAAAGACACaatttacattgaatt
tcgTTCTGGTATGTTAAAGATGGTTGATGAACAAAGTAATCTCCTTGCTA
GACTTAAAGCAACTGAAAATGCTACCAAAAAAGATATCTTCGTATGTTTA
CTGCACGATGTGATTGAGTTTTATAAACACGGAGGACAAATTAGTGGCAG
gcAAATCCAGAAGATTCAATGGCTCATTGAAACACTTTTACAACTTTCAC
CTACAGAAGATGAATCTAGGTTGTTTTTGACACGGATTTATTTACACCAA
AACTCCAACATAGATGAGACATTGGAACATTTGACTTATTTAATATCTCA
TGGGAATTTGCCAAGTGAACCAATACATCAATTGTTAACTGTCACCAAAC
GTCTCGAGGAAGAGAAAAAGAACGAAGAAAAAACTCAACCAAAACTGAGA
TCGTCTACAGAAGACAACCAAAAGGTGGTGTACAAGATCGGAATGATCAT
GAGACATCGAAGGCTTGGGTACATGTGTGTTATATACGGTTGGGACAATT
TTTGTGATATGCCGTATAATTGGCAACGTCAGATGGGCGTTTTAGATATG
TTGAATGGTCCTAATCAACCTTTCTACAACGTCATGGTCAATGATGGTTC
CAACAGATATGCAGCTCAAGAAAGTTTGATGATGCACGCAAATCCTGGTG
AAATCGCTCACGAAGAGATTGGCAAATACTTCTGCTCAATCATCAATAGC
TGTTACTATAAACCCACTGAAATGTTGAATGAAATGTACCCTGAGGATTG
CGATTGGTTTGGATGCCCAGATGTTTGATTAATGGATTAGCATGATGCTT
CCTGACTTTATGTAGTGCAGTATCTTATGATTGATGAGATATCTCATTTG
AGGACAAAAGTAATCATCTTAAATGATTGTATATTCCACTCCCTGTTGAG
GAGCTCCAACCTTTTTGTGAACTACCCCTTGGAATTCCAAGCAATTTTAG
AATTATACTCCTCTGGATTTccgaacttttccaaatttttaatcattacc
cccatggaattgcgcttatttttgacggatttttgtttactgctatggaa
ttccactgtaTTTCAAACCATAACCCCTTGGAATGGAAATGAACCTCCTc
gacagggggtgcacggtttttttctggaaaaacccgATGAAAAGAATTAA
ACCACAAGGCTACGGATGACGTAACGTAACTTTTTGGTTGAGTATTATGT
TTAACGGGATACTTTTCTTGAAAACAAGTAAAAGTAACTCGCATATGGCA
TAAATAGTGAGTTTATGCATGTGTGTtattcagcgacggagacggttaga
TTCTGATTTGTCTAGACCCTGATCAACCGAGAACGACGGTAAACAAGCAT
ATTTACTGGTCCACGAATTAGAACTGCGtattattccaaatcgcttcagt
cacaacgccgtcctcaaaagtacaAAACATGAAATTGGTAGTGTTTGATG
gcaaggtctgtaaattatgtTTTCAATGTTAAAATACTAAGATATGGTTT
ATAATAATGAATACGAGATTCGTTTCGCCCGAGGACGAAATCATCAAGTA
AAAGTGAATGTATTACACAAAATGaatataaaaaatgattgaTTACAATT
AGTTTGGTTTAAACAGATTCAATCATTGAGCCTTCCCTTCGTATTAAAAA
GAAACAAGCCAATAAAAACCTTTCGTTTATTAAGAACCGTTTGATATGGT
AAATATTTGGTATAGA
Run BLAST on NCBI

transcript from alignment at scaffold_423:53736..61367+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064716 ID=TCONS_00064716|Name=TCONS_00064716|organism=Clytia hemisphaerica|type=transcript|length=7632bp|location=Sequence derived from alignment at scaffold_423:53736..61367+ (Clytia hemisphaerica)
GGCACCAAAGAATACGAATATCCATCAATGTCAACTCAAGAAGACATCAA
ACGAATTTTGTGGATGTTCAATGATTTCTTACTCAAAGATGGTACATTTG
CACAAAAAGCTTTTCTTCTCATGTCGGATACAGACCGTAAGGTAGTCCTT
CTTGGTAGAAAATTGATactttctttaaaatgttttcattgatgattaaa
atgttttcaatgatttCTTACTCAAAGATGGTACATTTGCACAAAACGCT
TTTCTTCTCATGTCGGATACAGACCGTAAGGTAGTCCTTCTTGGTAGAAA
ATTGATactttctttaaaatgttttcattgaTAACTGAACGTTTGTTTTG
TTGTTCACTAAAGCTATTTCTAGATACTCTTGAAATGGATTTAATCAAGA
TTAATTAAGAtaaagttgttttttgaaaCGCCTGTCCAAGAAATTCAGAA
TTCAACTCCTGTGTTGAGATCATTGGAAAAAGTAATCTAATAATTGATTC
AGTAGGCGTTTCCAAGAATTGGAAAGTTTGTTCAGTTTATCCAACTTTGA
CGATGTggagaaaaaagttaaaaaaacctCATCTTTATGTTCCTAGTGTT
CATCTGTTTCAGTTCTCGTCTTCGGctctaaaatgttgtttttacaTCAC
ACTGGCAAGAAAACTTGGCCTCGATGTCAATGCTGTTAGGGTAAGAATAA
GATATTCATAGAATATTCTAAACTGGCGCTCAAATGAAGTGACTATTCGA
CCCCATCTAGGTGACATTCATGATTCTAGAAAAGAAACATTCTCCACaac
cacagcccttcgcatgtctcacaaagtttcaacaacaaaaaaacataaca
taatttacatttttttctttagattgaTGATACCAGTGCtcgaaaaagtc
aattttttacaTCAATAAAACCAAGCATCGGGTATCTAATTCTTGTTGAC
TTTATTATACCTACTGAGTGCGCCAAGAGAAAGTATAAATGTTTGTCAAG
ATATTGCGAGCTTAcggttaaaaattttttattgattcttttttggacct
acctcggaggtcctttaaattaactgcatgccggaaatatgctggaaaaa
ccagttttttggcactttctcgagatttcatcattagttttttctgatgt
tttgcaAAGAAAGATGCGTATCAgtaatgcccaaaacatggccgaggctg
atttttgagaaaaatttgctGAAAATCCCTGTTTTTGCAGGACTTTTTCT
Taatatgtctttgtttttttcacacaaaaacattattgataacaatgctc
aacATCAAGCAATTGTCaacaaaactgatttttgaagccgaaaCTTTCTA
AATTCACCGGAACAGTTGAGAATTGCCGGAAAAACggtttctcttgaatt
ttttgagctgtactttatattttttcatgaaattttggacACTGATGCAA
AAATGGCAATACCtgaaatgtgacagagcccgattttcaataaacatacA
TATNATTCACCGGAACAGTTGAgaatcgccggaaaaacggtttctcttga
attttttgagctgtactttatattttttcatgaaattttggacACTGATG
CAAAAATGGCAATACCtgaaatgtgacagagcccgattttcaataaacat
acatatttcttttttccctactccccttccctctcccccaacaacaatca
atgatgaaatttaatgcattttcgctaaacgcggattgtttttatttttc
tccttgttctgctatctaactttcatcgtcaggtaggtccattcagcatc
tagcttgtttattCTATGAATGAAAGctcaacttaaattttggtttaCAA
AACTTTAATCACTCAGTCAAAagttatgtttaaaaaattggaaattttga
aaattttaactacccaaaaaattcattaaaaatttgGTGGTTAATTGGAT
GAAAGGTTATAATGGTATTTTANatcaaaagttatgtttaaaaaactgga
aattttgaaaattttaactacccaaaaaattcattaaaaatttgGTGGTT
AATTGGATGAAAGGTTATAATGGTATTTTAAGATGAACGAAAAAGTCACG
TTCAGAAGTTGGTAAAAACGTCAAATATTGACCTTTCAAAATGAAATGGA
TGCGTATTTCAAGACTATAAGAGTTGgggaaaattttcttcaaagagaaa
tttttttttgtggcgcacctattaaattattattttttcaccaTTCTAGA
GACACaatttacattgaatttcgTTCTGGTATGTTAAAGATGGTTGATGA
ACAAAGTAATCTCCTTGCTAGACTTAAAGCAACTGAAAATGCTACCAAAA
AAGATGTAAGGTCCTACTAATAAATGTTTTtagattaaaaatttgaaata
tgctAACCACCTTTTTAGTATGTCAGTCAGTCACCTCAAAACTTTGGGAC
AGGCTGGTAacctcaaaaatggtcggattcggctgaaatttgggtgaata
tctgggggtatttttttttctccaagattttgatttttaggggcTTGGTC
ACAAGTTTCAtcctcaaaacgaggctaaaaactttTGGGCAGGctagaga
cttcaaaaattggtcttgcacacttgttcattgggtgaatatctgggggt
gttttttttcttctttttttcggaattttgatttttaggggtgTGGTCAC
GAGCTTTAGCCTCAAAACGATgctaaaaactttggggcacgctggagact
tcaaaaatgattttggtGAAATTTAGCTTactgttccttgggtgaatacc
tgaggttgattttttccttttttcgaaattttcattttcaggggcgtggt
cacgactttttcaccaaaacgaggctaaaacttttcttttatcaaaaatc
ttattttttaattttttttcttatgtttacAATGGGCCTACGAGTaatgc
ggttagcacgttcgaccaTGGATATAAGAACATAAACTAGAAAACAAAAC
TTATTTTACACCTGCTCAATTCTTTAATTTACTTGCAGCATATACAAATA
TAGTACGTGAGACGTGAGACGTAATAAAATTATAGAGTGTACAATTCAAT
CCCTTGTTCTGATAAAGTTTGAAAGGCGACTTTCCTATGTCTGTTTGTCT
GAGTAAAGTTTTGACATATGCTCACTCAAATAATCGCAATATTATTGCTT
GGGTAGTTTGGTTGAAAAATAGTTGTTCGTAGTGAGACTGATACGGTGAA
AATTAAAGGTAAttagttttgaaatgttttttgtgTTTCTTGTTTTGTCA
GATCTTCGTATGTTTACTGCACGATGTGATTGAGTTTTATAAACACGGAG
GACAAATTAGTGGCAGGTATGTGTACGATTTACAAACTTTATTACTTACA
ACtattcttcaaaaataatttcatgaaaattggCTTCTTACAccgttctt
acgttgaaatgaATCCTCTATCTTTGAGGAAGCCGTACACGTttcctttt
ataagaacaaattatataagaacataaggcttcgatggccaaaatgttaa
gaacatttttaaggctttgtggactcaaaacaccctttttcttaggaaaa
tggtcaaaacgaatactcacaaaatggtggaaataagaacatgttaagaa
catttttaggcttgaaactcaaaaaaagttaagaacattcgaaggcttca
aaatttttggatgttttttaaaattttaggcAAATCCAGAAGATACAATG
TAACCCATTTGATGAttgttttttaacattttaggcAAATCCAGAAGATT
CAATGGCTCATTGAAACACTTTTACAACTTTCACCTACAGAAGATGAATC
TAGGTTGTTTTTGACACGGATTTATTTACACCAAAACTCCAACATAGATG
AGGTTAAAAAACATTTCTAGAACTTGTCATGCacttaaaaatgttttctt
ataTATCTTCATTCTGTTTACAAAGTAGCAGGAAAGTCTGGTTTCAcgcc
aaaatgaaaaaagagtaaagatgaatcttccaattttttgagaaatagtA
TAAAGAACCCTGTTTTAGCAAAAATAGTCTTTTTGTTTTAGTTTgctatt
tttaacttttaattcCTTTTCCAGACATTGGAACATTTGACTTATTTAAT
ATCTCATGGGAATTTGCCAAGTGAACCAATACATCAATTGTTAACTGTCA
CCAAACGTCTCGAGGAAGAGAAAAAGAACGAAGAAAAAACTCAACCAGTT
TGTATCAGACAAAGTTTTTACCATATCATAATTCTCATTTTAAGCCGTAG
TCTAATGATCACCAATCACCTTTATGCGAATTTTTGCATTCTTTATTGAT
TTAATATTATCATTTATATTTAAGATTTCAGTTAAAATAACCAATTTTGA
ATTCGAATTTGGACGACTCATTTTGATATGAATGTTTCTGTCATAGTCCT
TTGAAAGTTTTAAGGAACCTTTTTCAGATTGTTACTACCGTATATACTAT
TTTTCATACTCCTTACATTTCTCTTTCAGAAACTGAGATCGTCTACAGAA
GACAACCAAAAGGTGGTGTACAAGATCGGAATGATCATGAGACATCGAAG
GTAACTGCAAGTTTTTATATTTAGCCCCACGTGGTTAGGTCTGGAAAACT
TTCTATTCGTAACTGCAATCAAAGAGGCTTTAATTTTGCGcaattaaaaa
agctttaattttGCGCAATTAAAGAagctttaattttgattttcaacccc
TCGGCGATTCATGATATATGCACTATAGCAATGTCTTCTGagattacatc
acggacccaaaagctgattggttgcaagtgatgAACTGAgagattttacg
tcacttacaaccaaccAGCTGTCGGGTCTATGGTGTGATATCGAAGACAT
TTCATTAATGCGTATCATGAAGAGGACCAGGTGCCCGGATTGAAAGTTGG
AAGCCAACACCCCCCATTACTTGAGGGTAATTTAATCTTATCGCTACATG
CTGCNTGGAAGCCAACACCCCAATTACTTGAGGGTAATTTAATCTTATCG
CTACATGCTGCCGCTGTTGATAGTAAAGAACGAACATTTTTTAGTTCCTC
TCCCCTCCATGTTGCCTCTTTAATGCCTATTTTCCACATATCTTCCACAT
AGCATttcttaaaatgaattttactATAAGGACTGGTAAAAACCTAAACA
TTGACCTTgcaaatattttatatatttactGGTTTTACTTTCTCAATATT
TTTGCAGGCTTGGGTACATGTGTGTTATATACGGTTGGGACAATTTTTGT
GATATGCCGTATAATTGGCAACGTCAGATGGGCGTTTTAGATATGTTGAA
TGGTCCTAATCAACCTTTCTACAACGTCATGGTCAATGATGGTTCCAACA
GATATGCAGCTCAAGGTATCCTTCCGTACTACTGTAACTTCAACAGCTTT
AAtacctttttatatttttatagaatattttcaaaaacatcatttatgta
cGTTCAATGGTCATTCTTCATATAATTTTTAACGTCAAAACAATGATCTC
AACTGAACGTTTGTAAACCTGATGAAGACCTCCACTGAggaggtcgaaat
attgtttaaaatgaaaatttatatgAAGAATGACCATTTGGGCGTACATA
AATGATTCAATAATATTCTCATCTGAAGTATGACaattcaagaattttca
aaaacaacatCGGATTTTACCCCATGTTTGTTGGAATTGGCTTTCGTATT
CGACCACGTGTTCTATTTTTGACGTTGCCTGATCTCATTTATCAATATTA
TAAAGAAAAGTAATTCTTACGTAACGcagtcactgacctttatatatccc
tggaccaagctatatccaccatctttgatcgaagttttctttgaattggt
acccacaaagaagccattgtagtgttgaAATTAACGTCTACCGGCGcttc
atcatcaaaagtattccagGGAACGTAGATCTAGCGCtatcgatgcattt
acaccactattgagtagtgtcgccattagggtaccacttatcaaaaaact
ccgatcaaagttTTTGCCTGGCCATTATTGaataacttggtccagggata
tataaaggtcagtgaacGCAGTGCGTCCGGGAGAAAATCAGTGATCGAGT
TGAATTCATGTATAGGGAAATATCAATTCAATTTATATCGCCTATTTATT
AtacttgattttgttttttcaaaaacgtGTTTTATTACTTTGGTAATTGC
TTATCCATTgataaaaatttctctctcattACAATCAAAGTATTTAAGAT
CTCCTCTGCTTTTTTCCGGACAGACTGTAGAAAGGAGTGATTTGGCAACA
GCTCTTTTTATTCATGTTAttcgtgacgtaatgttttctccGGAAATAct
ccggttttagccagtagtgacAACTTTAAACAAGACAAAacttgtataaa
atttgccactactggcaaaaaccgggttcttttcgtagaaaacattacgt
catgaatatcatgaataacattttttaaacaaatagAAAGTTTGATGATG
CACGCAAATCCTGGTGAAATCGCTCACGAAGAGATTGGCAAATACTTCTG
CTCAATCATCAATAGCTGTTACTATAAACCCACTGAAATGTTGAATGAAA
TGTACCCTGAGGATTGCGATTGGTTTGGATGCCCAGATGTTTGATTAATG
GATTAGCATGATGCTTCCTGACTTTATGTAGTGCAGTATCTTATGATTGA
TGAGATATCTCATTTGAGGACAAAAGTAATCATCTTAAATGATTGTATAT
TCCACTCCCTGTTGAGGAGCTCCAACCTTTTTGTGAACTACCCCTTGGAA
TTCCAAGCAATTTTAGAATTATACTCCTCTGGATTTccgaacttttccaa
atttttaatcattacccccatggaattgcgcttatttttgacggattttt
gtttactgctatggaattccactgtaTTTCAAACCATAACCCCTTGGAAT
GGAAATGAACCTCCTcgacagggggtgcacggtttttttctggaaaaacc
cgATGAAAAGAATTAAACCACAAGGCTACGGATGACGTAACGTAACTTTT
TGGTTGAGTATTATGTTTAACGGGATACTTTTCTTGAAAACAAGTAAAAG
TAACTCGCATATGGCATAAATAGTGAGTTTATGCATGTGTGTtattcagc
gacggagacggttagaTTCTGATTTGTCTAGACCCTGATCAACCGAGAAC
GACGGTAAACAAGCATATTTACTGGTCCACGAATTAGAACTGCGtattat
tccaaatcgcttcagtcacaacgccgtcctcaaaagtacaAAACATGAAA
TTGGTAGTGTTTGATGgcaaggtctgtaaattatgtTTTCAATGTTAAAA
TACTAAGATATGGTTTATAATAATGAATACGAGATTCGTTTCGCCCGAGG
ACGAAATCATCAAGTAAAAGTGAATGTATTACACAAAATGaatataaaaa
atgattgaTTACAATTAGTTTGGTTTAAACAGATTCAATCATTGAGCCTT
CCCTTCGTATTAAAAAGAAACAAGCCAATAAAAACCTTTCGTTTATTAAG
AACCGTTTGATATGGTAAATATTTGGTATAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040595XLOC_040595Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064716-exon-scaffold_423-1491911889:53736..53876TCONS_00064716-exon-scaffold_423-1491911889:53736..53876Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:53736..53876TCONS_00064716-exon-scaffold_423-1510915933:53736..53876Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:53736..53876TCONS_00064716-exon-scaffold_423-1575043694:53736..53876Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:54348..54425TCONS_00064716-exon-scaffold_423-1491911889:54348..54425Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:54348..54425TCONS_00064716-exon-scaffold_423-1510915933:54348..54425Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:54348..54425TCONS_00064716-exon-scaffold_423-1575043694:54348..54425Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:54608..54717TCONS_00064716-exon-scaffold_423-1491911889:54608..54717Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:54608..54717TCONS_00064716-exon-scaffold_423-1510915933:54608..54717Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:54608..54717TCONS_00064716-exon-scaffold_423-1575043694:54608..54717Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:55985..56090TCONS_00064716-exon-scaffold_423-1491911889:55985..56090Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:55985..56090TCONS_00064716-exon-scaffold_423-1510915933:55985..56090Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:55985..56090TCONS_00064716-exon-scaffold_423-1575043694:55985..56090Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:57037..57101TCONS_00064716-exon-scaffold_423-1491911889:57037..57101Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:57037..57101TCONS_00064716-exon-scaffold_423-1510915933:57037..57101Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:57037..57101TCONS_00064716-exon-scaffold_423-1575043694:57037..57101Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:57520..57637TCONS_00064716-exon-scaffold_423-1491911889:57520..57637Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:57520..57637TCONS_00064716-exon-scaffold_423-1510915933:57520..57637Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:57520..57637TCONS_00064716-exon-scaffold_423-1575043694:57520..57637Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:57860..57982TCONS_00064716-exon-scaffold_423-1491911889:57860..57982Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:57860..57982TCONS_00064716-exon-scaffold_423-1510915933:57860..57982Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:57860..57982TCONS_00064716-exon-scaffold_423-1575043694:57860..57982Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:58265..58335TCONS_00064716-exon-scaffold_423-1491911889:58265..58335Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:58265..58335TCONS_00064716-exon-scaffold_423-1510915933:58265..58335Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:58265..58335TCONS_00064716-exon-scaffold_423-1575043694:58265..58335Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:58993..59150TCONS_00064716-exon-scaffold_423-1491911889:58993..59150Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:58993..59150TCONS_00064716-exon-scaffold_423-1510915933:58993..59150Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:58993..59150TCONS_00064716-exon-scaffold_423-1575043694:58993..59150Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1491911889:60272..61367TCONS_00064716-exon-scaffold_423-1491911889:60272..61367Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1510915933:60272..61367TCONS_00064716-exon-scaffold_423-1510915933:60272..61367Clytia hemisphaericaexon
TCONS_00064716-exon-scaffold_423-1575043694:60272..61367TCONS_00064716-exon-scaffold_423-1575043694:60272..61367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:53736..61367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	5.56418e-09	0	2.96266e-07	0	1.28778	1.84928	7.24702e-09	0.0429071	1.40795	2.11973	0.900906	0.90573	1.7415	1.88821	3.08401e-07	1.39162	0	0	0	0	0	0	0	0	0.342335	0
Blast
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BLAST of TCONS_00064716 vs. Swiss-Prot (Human)
Match: FBX21 (F-box only protein 21 OS=Homo sapiens GN=FBXO21 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 3.067e-29
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1 
Query:  742 KLRSSTEDNQKVVYKIGMIMRHRRLGYMCVIYGWDNFCDMPYNWQRQMGVLDMLNGPNQPFYNVMVNDGSNRYAAQESLMMHANPGEIAHEEIGKYFCSIINSCYYKPTEMLNEMYPEDCDW 1107
            KLRS  E ++ V Y IG+IM+H+R GY CVIYGWD  C M + W R M V  + +G +QPFYNV+V DGS RYAAQE+L  +  P EI+H ++G+YF S     +Y P   L   YPED ++
Sbjct:  491 KLRSD-EKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYF-SEFTGTHYIPNAELEIRYPEDLEF 610
The following BLAST results are available for this feature:
BLAST of TCONS_00064716 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBX213.067e-2950.00F-box only protein 21 OS=Homo sapiens GN=FBXO21 PE... [more]
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