TCONS_00064621 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064621
Unique NameTCONS_00064621
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064621 ID=TCONS_00064621|Name=TCONS_00064621|organism=Clytia hemisphaerica|type=transcript|length=151bp
AGTTAGTGTCATACATttgcttcattttcaattttggcaTACAACGTATG
TGTATGTATGGAGAATATTGCTCTCAGAAGTGAAAAGTAGCCCATGTCAG
TTGATTGTGATAATCCTGATTATTACCCCTCTTGATATATAGATCTTTTT
G
Run BLAST on NCBI

transcript from alignment at scaffold_419:429120..429270

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064621 ID=TCONS_00064621|Name=TCONS_00064621|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at scaffold_419:429120..429270 (Clytia hemisphaerica)
CAAAAAGATCTATATATCAAGAGGGGTAATAATCAGGATTATCACAATCA
ACTGACATGGGCTACTTTTCACTTCTGAGAGCAATATTCTCCATACATAC
ACATACGTTGTAtgccaaaattgaaaatgaagcaaATGTATGACACTAAC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040530XLOC_040530Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064621-exon-scaffold_419-1491911889:429120..429270TCONS_00064621-exon-scaffold_419-1491911889:429120..429270Clytia hemisphaericaexon
TCONS_00064621-exon-scaffold_419-1510915933:429120..429270TCONS_00064621-exon-scaffold_419-1510915933:429120..429270Clytia hemisphaericaexon
TCONS_00064621-exon-scaffold_419-1575043694:429120..429270TCONS_00064621-exon-scaffold_419-1575043694:429120..429270Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:429120..429270 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064621 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top