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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064581 ID=TCONS_00064581|Name=TCONS_00064581|organism=Clytia hemisphaerica|type=transcript|length=260bp
gtaaaaacaaaaattctcgATCCCGATACGTTCGACAAATATCTTGACAT
AGGAGTAGATTTCCTTGGGGATTTTGTAAAACAGCTGGCAAATGGTATGT
TTAGAATGTTTTGCGGCAATTTAGCGACGAAActctttgaaaaagaagaa
gcagAGTGGTGGAATGGCTTCTTCAAAAATGTTATGCCAACCAACTCGTA
TAATAAAGCAGTCGAATTCGTGAAGAACTCTATTACGAACGAGTCGAGGA
AAGAGCTTNT Run BLAST on NCBI transcript from alignment at scaffold_419:406104..407126- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064581 ID=TCONS_00064581|Name=TCONS_00064581|organism=Clytia hemisphaerica|type=transcript|length=1023bp|location=Sequence derived from alignment at scaffold_419:406104..407126- (Clytia hemisphaerica)
GTAAAAACAAAAATTCTCGATCCCGATACGTTCGACAAATATCTTGACAT
AGGAGTAGATTTCCTTGGGGTAAGAAAATATCTACTATTTTTGTCTGTCT
GGTTATCCAACGATTTGAAAATAATTTCTGCGGTCATTTCAGACCAAGAG
GGTATGTCACGTTGTTTACCAAAAACCAATTTATAATATCGATTAAGGGC
TATGACCCTCGAAAAGTTGATTTTGTTATTTGAACATAACATTTATAGGT
TCCTTACAGTTTTAACAAATAATTGCCTATTAATCAAATCCCTTAAGAGT
AATTAAGAATTTAATTGCAAAAATGACGTTATGAACTTTAAAAAGACATC
GTTTTCGTCTTCGTTAATTTTTTTCATTATGTTTCCTAAATTCTCAGACT
CAAGGATAGTCGGCCTAACAGAAAATAACATGCCAAAGCTACATCATGCA
GACATTTATATTTTGTACGTGGCAAATATTAGAAACTATGGTCAGAGCCC
TTAAGGTGGACCAAAAGGACCTTGACTCTAATTGTGGGTGACTTTTTTCT
CTGAATGGCATTTAGACCTTTTAACAATTGATGCATAGTTTGAATGTAAA
AGTTAAGGTTTTCACTGGTTCTTTTTTTATTCTTTTCATACTATCACAGG
ATTTTGTAAAACAGCTGGCAAATGGTATGTTTAGAATGTTTTGCGGCAAT
TTAGCGACGAAACTCTTTGAAAAAGAAGAAGCAGAGTGGTGGAATGGCTT
CTTCAAAAATGTTATGCCAACCAACTCGGTATGTTCTATTTTTTTTCGAC
TCATTCTTTATGCCGAAGAGATCCTGAATACTGAAAAATTCTTGAAACTG
TAAAATATCTCAAGCAAAAATTATCAGATGAATTTATTACAACTAACCAA
TTCATAAGGTTTGTATAAAATTGCTGGTTTTAGTTTCATTAATTTATAAT
CTTTATTTTAGTATAATAAAGCAGTCGAATTCGTGAAGAACTCTATTACG
AACGAGTCGAGGAAAGAGCTTNT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064581-exon-scaffold_419-1575043694:407058..407126 | TCONS_00064581-exon-scaffold_419-1575043694:407058..407126 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1575043694:406349..406477 | TCONS_00064581-exon-scaffold_419-1575043694:406349..406477 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1575043694:406104..406165 | TCONS_00064581-exon-scaffold_419-1575043694:406104..406165 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1510915933:407058..407126 | TCONS_00064581-exon-scaffold_419-1510915933:407058..407126 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1510915933:406349..406477 | TCONS_00064581-exon-scaffold_419-1510915933:406349..406477 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1510915933:406104..406165 | TCONS_00064581-exon-scaffold_419-1510915933:406104..406165 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1491911889:407058..407126 | TCONS_00064581-exon-scaffold_419-1491911889:407058..407126 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1491911889:406349..406477 | TCONS_00064581-exon-scaffold_419-1491911889:406349..406477 | Clytia hemisphaerica | exon |
| TCONS_00064581-exon-scaffold_419-1491911889:406104..406165 | TCONS_00064581-exon-scaffold_419-1491911889:406104..406165 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_419 | supercontig | scaffold_419:406104..407126 - |
Blast
The following BLAST results are available for this feature:
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