TCONS_00064505 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064505
Unique NameTCONS_00064505
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1210

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064505 ID=TCONS_00064505|Name=TCONS_00064505|organism=Clytia hemisphaerica|type=transcript|length=1210bp
GCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGATCAAAGGAA
CAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGT
GGAATAGGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGAAAGTCG
ATTACATATTTGCACCAACATTGAAAGTTCCTGGAATTGGTGTAAAGATT
CAGCCTCGTTGGCGCTAAACAAGTATTATTCCGTCGAGCTGGAGCAGAAA
AGGGATGGTGGTACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATT
GGCTACTATTAACAATAGATATCCTCAGTCCCATGATAACATGAAAGCAT
ATTTCTCCGATCAATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATC
ATCTTCCAAAACACTGACTCAATATTACGTTGTGGTGACAAATGTACACC
AATCAGAAGTCAAGAAAATGTTCAAGGAGAACAAACCGAAGTATTGACAT
TCGACAAATACCAATGTACGAAAGAAAATGAAATCCATATGAAGTTGAAT
CTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGTTGAAATCACATA
CAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACTTCATTGTCT
ACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGTCAAAagaaa
acatccttccaagaggGTTGGGTCACAACCAAAATTGATTCTTCCTACAG
ACTTGCAGATAAACCATCGGTTGGCTTATTCCTGAAATCATATTTCAATG
ATAATTGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCT
TGCTGAACCAATTATGGTTAAGTTTGGGTATGGATTTCAACCCTGGATAA
TGAATTTGGTATATGTAATCATCGATCCTTTTCTTCACGAGTGTGATCGG
CGATGCTATCAAAAGGTCatgatttttctaatttttatttcCTAATNTGC
GATTGGCGATGCTATCAAATGGTCatgatttttctaatttttatttctta
agTTTTATCTTGATATTGGTTATGATTTATTGAAAGCATAATCCTAATGA
GATTTTTTTGATAATCTTTCGTGATAAATAAGTTCGGGGTTAATTTTTTA
TATCCACACTATGGGAACGATAGTTTTTAGTTTCTTCAAATATATTAAAA
ACAAATGCTA
Run BLAST on NCBI

protein sequence of TCONS_00064505-protein

>TCONS_00064505-protein ID=TCONS_00064505-protein|Name=TCONS_00064505-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
RVNEGWKLSFDVMIKGTVRSWTNLISFNNGKSSGIGARVPSIFVRPRESR
LHICTNIESSWNWCKDSASLALNKYYSVELEQKRDGGTFVYTIKIDGKQL
ATINNRYPQSHDNMKAYFSDQFNPASNAVVKNIIFQNTDSILRCGDKCTP
IRSQENVQGEQTEVLTFDKYQCTKENEIHMKLNLPKKPQLIRGSCVEITY
KVGRPRNNNRNCDFIVYQRRADNNKLEYLGQKKTSFQEGWVTTKIDSSYR
LADKPSVGLFLKSYFNDNCPLVSFAAFKLLDGPC
Run BLAST on NCBI

transcript from alignment at scaffold_418:171877..177681-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064505 ID=TCONS_00064505|Name=TCONS_00064505|organism=Clytia hemisphaerica|type=transcript|length=5805bp|location=Sequence derived from alignment at scaffold_418:171877..177681- (Clytia hemisphaerica)
GCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGATCAAAGGAA
CAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGT
GGAATAGGTATCTTCATGTTTAAGTTTACCCCTCTTTCATTCTTTGCAAA
CTTATCTAGAGTAGAAGCTCAGTAATTTAGGACTTCCCGACATTGGTCTT
TCTTTGCGCATGGTCCACGGCCAGCCGGTTCGTCCAGCTGTGAGCCGAAT
AGAATAGTGGAAGAAACTTAAATTCGAATCGGTAACCCCTGGTTTGTGGC
ACCAACGCCTCAGACGCCATCATAATGTTAATGTTGAATTTACACTGTAA
AGAATAGTCTACCTACATGCTAGTGCTACCACTAATCCAGAATCCTCAAC
CTATCAAAGGAGCAACGAGGTTTTGCTCCTTTTTCCTTCTACACTGTATT
TTTTAAAGTACTATATACGCACATCCTTCATCATACTTTCATTCCCATCG
TTAATTCTAAACTAGAAGTGAGAAATTGGATCTAAATCGGGATGAAAGAC
ACACGGATAAGGATGAGAGTTTGGCCGGGTCCTTTCAATTTGGATTTTTT
CCTACAGGGGATGGTTTCTTGGCCTAGCTTTCAAATGAGGGGGGGGGTCC
ATATCGAATCTACGATTCGAAGTTATTCCTGAACCTTACAATATGTTGAC
GAACTAACATATTGACCGTGGGTTTCTTTTCTATAGGTGCTCGTGTTCCT
TCCATTTTTGTTCGCCCAAGAGAAAGTCGATTACATATTTGCACCAACAT
TGAAAGTTCCTGGAATTGGTGTAAAGATTCAGCCTCGTTGGCGCTAAACA
AGTATTATTCCGTCGAGCTGGAGCAGAAAAGGGTCAGTATTTGTTATAAA
ATCTTCAAAAGTTGAATTTTCTTGGTTGATAGAACAATTAATCACACTAA
TTTTATAATAGAATCCACTCTACCAATTTATTTTCTTAAAATTCTTAAGA
CATTCAGAGGTTTACCGTGTCCGTAAGAAAATTATTACCAGCTGTTATCA
GGTTAGCGCATGCCACGCTCTGGTCTTATAGGGATGTGGCGAATGAAACG
ATTTGACCTGGTTGTTCAGCAAAAAAAATCAAAAACGCGTTGCTTTTTGA
TTGAAAACGATAGCGAAAGTGGCCTATATAGAGTGAATACGTGCCACGCA
TAGAGTATTACACCATATGCTCAGCGATAAGGAGCTAGGTAGAGTAAATC
ATAAATATTTTCACTTAATTCATACATCATCAATCTTATAGGATGGTGGT
ACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATTGGCTACTATTAA
CAATAGATATCCTCAGTCCCATGATAACATGAAAGCATATTTCTCCGATC
AATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATCATCTTCCAAAAC
ACTGACTGTAAGTTACACCACCTTCTCACGAAACCACTGGGAGCTCTCCT
CACTGGAGAAATTGGCCAAAATATCGCCCCCGGTGGAAAATTATTCTCCA
ATTTTTGTCCCCACTAAAATATTCAGATAATTGAATCCTCACTGCAAAAT
ACACGTTTTTTCATTTAGAACCCAGTTTATAAGAAAATTTAGGCTGCAAT
TCGTCGAAAAATTAAGAACATCGTAAGAACATGCCCAGCCTCAGTTTGAA
AAAAATGAAAGAAACTACAACTTTTTCATCTTTTTAAAGAGTTTTAACCG
AACTAAGGGATGTATTTTCTAAAATCGAGAGTCAAATATTGTCCAAATTT
TACCAATCTTAAGTGCTCTTTTTTTTGCATGATATTGTCGATTTAAAGTA
GTTTGAAAAAATAAGAACGCATGTAAGAACAACATTTTAGGCTGAAAATT
GCTAAAGAAATAAGCACATCCAGGCTCAGCCAAATTTTAGGTGTTNNTGT
TAGAACGTTGCCCACAAACTGCTAATCAGAACAGATCAGAAAGCAAAGTA
ATAATTCTATTGCAGAGNNNNNNNNNNNNNNNNNNNNNNNAATAAACCAG
CTGGAAGTTTAGCTCTTCTAAGTGATTACACATGCACTTTCTTGCCTAAA
GAACCAACCCCACCCCCCGCCCACTCATCCNNNNNNNNNNNNNNCATTTA
GAAGTCAATATTTCCAAGTTCTTGATTTGATTGTCCAGATAAAATTTCGG
GGAGAAAAATAGCCTAAATTAGAGGCCACGGGCTTTTAGCTAAGCATTAG
TTTTTCTGTTGGGATAATACTTGGGGGAGAGTAGGATAAACCAAATAAAA
TGGTAAAATAGTGTGTATGTAATAAATAGTGGTATATTTGGAAAAAACCT
GTTTCGGGTTTGAAAAATCTTAAAAAGGAACGGTCGCCCTAGCCAATGAA
ATTACGACAAAGTCCAAAAAATATCATTTTCAGTTATAACACTGAAAATT
TCTCCGATCTTGTTCAAATTTACACAGGAATTGTGTTTTAGTATCCTTTA
GTGAATTCTCATAGTGATATGTTTGTATAAAATCTGTGTCGGGTTTGAAA
AATTAAAGGAACGGTCGCCAGCAGCGATGAAATTACGACAAAAAGTCCAA
AAACAATCAATTTCAGCCATAACACTGTGAAAATTTCTCCAATCTTGTTC
AAATTTACACAGGAATTGTGTTTTAGTATCCTTTAGTGAATTCTCATAGT
GATATGTTTGTATAAAATCTGTGCTGGGTTTGAAAAATCAAAAGGAACGG
TCGCCAGCCGCGATGAAATTACGACAAAGTCCAAAAACGATCATTTTCAG
CCATAATACTGTGAAAATTTCTCCAATCTTGAATTCAAATTTACACAGGA
ATTGTGTTTTAGTATCCGTTATTGAATTCTCATAGTGATATGTTTGTAAA
ATATCTGTGTCGGGTTTGAAAAATCAAAAAGAACGGTCGCCCAGTCAAAA
AATGATGAATAATAAAACAACAAAACAGGATCATTGGGCTCTTCCAGTTA
AAGTCCGTTATAGGGGGGTGGACGACAGCGGAATTCCGAGGCAAAATGCT
TTTTTGAAATTCCTGGATTTCCAATACAAAAGCAATTGAAACTCCTGGAT
TTCCGATACAAAATCAATTTTTTGGTGCAAAAATCTGGAATTTCTGATAC
CTTTTTCAAAACTTTGACAAATTATGTGGAATTTCCAAGGGTTGAAATAA
AAAATTGAGCAGAATTTCCGAAGCACTTTGACAAATTATGTGGAATTTCC
AAGGGTTGAAATAAAAAATTGAGCAGAATTTCCGAAGCACTTTGAAAAAT
TGACTGGATTTCCGAGTGCTTTTTTTATCTGAAAATTCCCGTGTCATCCA
CCCCCTATATCAAATTTTTTCTGGAAGAGCCCATTTTCAACCATACACAT
AACACCACAAAAACTGCTCAGATCGTTTTCAAATTTGCACTGTAATGTTG
TAATTTGAGTATTCTCTTTCGAATTCCAATGGATGTGTGTTTGAAAGTTT
CACAGAGTTTTATGGTTTTGTGGTTGTTTTGTTAGTTTGTGCGTCCATAA
AACTAGAGAAGTTATAGCCATATGCAAGATTTAATTCATGGCCAAAATTT
CTCCAAAGTCTTTCCGCATTGTTATAGACCAGTATGCATCAGAATTCTCA
TAAATCATGTCCAAAACATCATGAATAATGATGAAAATGATCACTATCTT
TCACTGAGATTTGCAGCTAAGCCCACTTTCGGCAGTCATCTTTTTCTAAA
TACTTTCGCAATATTATCGAAATCCAGATATCCGTTTTTATTAAATCGGA
ATAGATTATCGGATTAGATAAACAAACAAAAAATGTCTTGACCGTCGGAA
GAGAGAATTAAAGGCTCCTAGGCCGGAGCAAAAACGTGTATTGTGCTATT
TTGTATATTTTTTCCATCCCCACTGACTTTTCTGGCTCAAAAATAATGGA
ATTCAAATCCCCAGCCATACAAAAGCATGGAAATATCCTGAAATCTAAGG
ACATTTTTTTGGTAGAGGTCGATCAAGGGATCGATCCTGCGCACATGTAA
TTTATGTAGTTGGCTATGAAAATCAAAATAATAAAAACGACAATTTTCGA
TTTTAGCAATATTACGTTGTGGTGACAAATGTACACCAATCAGAAGTCAA
GAAAATGTTCAAGGAGAACAAAGTAAGTCCATAATACTTACTTTGATTTG
TTACTGTCAATTTCCTATAATTTGACCCACTATTATTTAAAAATCTTTCT
GTTAATCAACCAAGCAATCTGAAATAAGAAACGTCTTACTCATCATTTTC
ACTTGCCTTAAGAGAGGCTCCACTGGAATTTGTCCTATAAATCTTTTGGT
TAAATGTAATAGAAATGTAAAAGAAATTATATTTGGAACCTTTTATCTGT
TTCCCATTGAGAATAGATTATAATAGATTGTAGGTAGCATGACACACATT
AGGATGTCTTTCTTATTTTGCTCATAGAGTCCAATAGATAGGTCTGATAT
GTTTGATTTGGATAGCTCAGTAATCTTGGACGTTTAGATAGTCTTTTGAT
TGCTTTAACTATGAACTGAACGTTCGTTCTTCGTTCGTTTAGTATTTCAT
ATATACTCACTATATATTACGACTTATTCTTCTCTTCACAGCCGAAGTAT
TGACATTCGACAAATACCAATGTACGAAAGAAAATGAAATCCATATGAAG
TTGAATCTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGTTGAAAT
CACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACTTCA
TTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGTCAA
AAGAAAACATCCTTCCAAGAGGGTTGGGTCACAACCAAAATTGATTCTTC
CTACAGACTTGCAGATAAACCATCGGTGAGTTAGGATATTTTTCTAAATA
GTCGGTTCAAAGAAATCTTTTATTTAAGATTGTATCCAATTTTTGCCACA
CAACATACGCATCTAAAAAGTATCACAGTTTCCTTGTTCACACGAACAAC
ACTGACACCACCGTGCCACAGATCTGCCTATCCCAAAAAATGAAAAAATG
TTTCATTTCCACTCTACTCAAAACCACTCTGACTTTTATCCCCACATGAT
AGGAAAGGTACTAAAATTTTGGGATTCTGATTTTCAAGCCCGATGGATTT
TGTCTCCTTTTTGGATTTGAATGCTCAATTTCATCCTCGATTTTTATTAC
AGAATTTCACCATTATTCCACAAAGTTATAAAAGATCATGACAACTATAC
CTTTCATTCATTCAGCATTATATTTTGCAGCCTAAAACGACTAATTTATG
TTTTACCTTTACAGGTTGGCTTATTCCTGAAATCATATTTCAATGATAAT
TGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCTG
AACCAATTATGGTTAAGTTTGGGTATGGATTTCAACCCTGGATAATGAAT
TTGGTATATGTAATCATCGATCCTTTTCTTCACGAGTGTGATCGGCGATG
CTATCAAAAGGTCATGATTTTTCTAATTTTTATTTCCTAATNTGCGATTG
GCGATGCTATCAAATGGTCATGATTTTTCTAATTTTTATTTCTTAAGTTT
TATCTTGATATTGGTTATGATTTATTGAAAGCATAATCCTAATGAGATTT
TTTTGATAATCTTTCGTGATAAATAAGTTCGGGGTTAATTTTTTATATCC
ACACTATGGGAACGATAGTTTTTAGTTTCTTCAAATATATTAAAAACAAA
TGCTA

Coding sequence (CDS) from alignment at scaffold_418:171877..177681-

>TCONS_00064505 ID=TCONS_00064505|Name=TCONS_00064505|organism=Clytia hemisphaerica|type=CDS|length=5130bp|location=Sequence derived from alignment at scaffold_418:171877..177681- (Clytia hemisphaerica)
GTTGGCTTATTCCTGAAATCATATTTCAATGATAATTGTCCCTTGGTTAG
TTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCTGACCGAAGTATTGAC
ATTCGACAAATACCAATGTACGAAAGAAAATGAAATCCATATGAAGTTGA
ATCTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGTTGAAATCACA
TACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACTTCATTGT
CTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGTCAAAAGA
AAACATCCTTCCAAGAGGGTTGGGTCACAACCAAAATTGATTCTTCCTAC
AGACTTGCAGATAAACCATCGCAATATTACGTTGTGGTGACAAATGTACA
CCAATCAGAAGTCAAGAAAATGTTCAAGGAGAACAAAGATGGTGGTACTT
TTGTTTACACAATCAAAATCGACGGAAAGCAATTGGCTACTATTAACAAT
AGATATCCTCAGTCCCATGATAACATGAAAGCATATTTCTCCGATCAATT
CAATCCGGCATCAAATGCTGTTGTTAAAAACATCATCTTCCAAAACACTG
ACTGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGAAAGTCGATTA
CATATTTGCACCAACATTGAAAGTTCCTGGAATTGGTGTAAAGATTCAGC
CTCGTTGGCGCTAAACAAGTATTATTCCGTCGAGCTGGAGCAGAAAAGGC
GGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGATCAAAGGAACA
GTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGTGG
AATAGGTTGGCTTATTCCTGAAATCATATTTCAATGATAATTGTCCCTTG
GTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCTGACCGAAGTA
TTGACATTCGACAAATACCAATGTACGAAAGAAAATGAAATCCATATGAA
GTTGAATCTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGTTGAAA
TCACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACTTC
ATTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGTCA
AAAGAAAACATCCTTCCAAGAGGGTTGGGTCACAACCAAAATTGATTCTT
CCTACAGACTTGCAGATAAACCATCGCAATATTACGTTGTGGTGACAAAT
GTACACCAATCAGAAGTCAAGAAAATGTTCAAGGAGAACAAAGATGGTGG
TACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATTGGCTACTATTA
ACAATAGATATCCTCAGTCCCATGATAACATGAAAGCATATTTCTCCGAT
CAATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATCATCTTCCAAAA
CACTGACTGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGAAAGTC
GATTACATATTTGCACCAACATTGAAAGTTCCTGGAATTGGTGTAAAGAT
TCAGCCTCGTTGGCGCTAAACAAGTATTATTCCGTCGAGCTGGAGCAGAA
AAGGCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGATCAAAG
GAACAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCC
AGTGGAATAGGTTGGCTTATTCCTGAAATCATATTTCAATGATAATTGTC
CCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCTGACCG
AAGTATTGACATTCGACAAATACCAATGTACGAAAGAAAATGAAATCCAT
ATGAAGTTGAATCTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGT
TGAAATCACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTG
ACTTCATTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTG
GGTCAAAAGAAAACATCCTTCCAAGAGGGTTGGGTCACAACCAAAATTGA
TTCTTCCTACAGACTTGCAGATAAACCATCGCAATATTACGTTGTGGTGA
CAAATGTACACCAATCAGAAGTCAAGAAAATGTTCAAGGAGAACAAAGAT
GGTGGTACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATTGGCTAC
TATTAACAATAGATATCCTCAGTCCCATGATAACATGAAAGCATATTTCT
CCGATCAATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATCATCTTC
CAAAACACTGACTGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGA
AAGTCGATTACATATTTGCACCAACATTGAAAGTTCCTGGAATTGGTGTA
AAGATTCAGCCTCGTTGGCGCTAAACAAGTATTATTCCGTCGAGCTGGAG
CAGAAAAGGCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGAT
CAAAGGAACAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAA
AATCCAGTGGAATAGGTTGGCTTATTCCTGAAATCATATTTCAATGATAA
TTGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCT
GACCGAAGTATTGACATTCGACAAATACCAATGTACGAAAGAAAATGAAA
TCCATATGAAGTTGAATCTTCCAAAAAAACCACAACTTATTCGTGGCTCA
TGCGTTGAAATCACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAA
CTGTGACTTCATTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGT
ATTTGGGTCAAAAGAAAACATCCTTCCAAGAGGGTTGGGTCACAACCAAA
ATTGATTCTTCCTACAGACTTGCAGATAAACCATCGCAATATTACGTTGT
GGTGACAAATGTACACCAATCAGAAGTCAAGAAAATGTTCAAGGAGAACA
AAGATGGTGGTACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATTG
GCTACTATTAACAATAGATATCCTCAGTCCCATGATAACATGAAAGCATA
TTTCTCCGATCAATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATCA
TCTTCCAAAACACTGACTGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCA
AGAGAAAGTCGATTACATATTTGCACCAACATTGAAAGTTCCTGGAATTG
GTGTAAAGATTCAGCCTCGTTGGCGCTAAACAAGTATTATTCCGTCGAGC
TGGAGCAGAAAAGGCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTC
ATGATCAAAGGAACAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAA
TGGAAAATCCAGTGGAATAGGTTGGCTTATTCCTGAAATCATATTTCAAT
GATAATTGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCC
TTGCTGACCGAAGTATTGACATTCGACAAATACCAATGTACGAAAGAAAA
TGAAATCCATATGAAGTTGAATCTTCCAAAAAAACCACAACTTATTCGTG
GCTCATGCGTTGAAATCACATACAAAGTTGGGCGACCTCGCAACAATAAC
CGCAACTGTGACTTCATTGTCTACCAGAGACGTGCCGACAACAACAAATT
GGAGTATTTGGGTCAAAAGAAAACATCCTTCCAAGAGGGTTGGGTCACAA
CCAAAATTGATTCTTCCTACAGACTTGCAGATAAACCATCGCAATATTAC
GTTGTGGTGACAAATGTACACCAATCAGAAGTCAAGAAAATGTTCAAGGA
GAACAAAGATGGTGGTACTTTTGTTTACACAATCAAAATCGACGGAAAGC
AATTGGCTACTATTAACAATAGATATCCTCAGTCCCATGATAACATGAAA
GCATATTTCTCCGATCAATTCAATCCGGCATCAAATGCTGTTGTTAAAAA
CATCATCTTCCAAAACACTGACTGTGCTCGTGTTCCTTCCATTTTTGTTC
GCCCAAGAGAAAGTCGATTACATATTTGCACCAACATTGAAAGTTCCTGG
AATTGGTGTAAAGATTCAGCCTCGTTGGCGCTAAACAAGTATTATTCCGT
CGAGCTGGAGCAGAAAAGGCGGGTCAATGAAGGGTGGAAATTATCATTTG
ACGTCATGATCAAAGGAACAGTACGAAGTTGGACCAACTTGATCAGTTTC
AATAATGGAAAATCCAGTGGAATAGGTTGGCTTATTCCTGAAATCATATT
TCAATGATAATTGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGAT
GGTCCTTGCTGACCGAAGTATTGACATTCGACAAATACCAATGTACGAAA
GAAAATGAAATCCATATGAAGTTGAATCTTCCAAAAAAACCACAACTTAT
TCGTGGCTCATGCGTTGAAATCACATACAAAGTTGGGCGACCTCGCAACA
ATAACCGCAACTGTGACTTCATTGTCTACCAGAGACGTGCCGACAACAAC
AAATTGGAGTATTTGGGTCAAAAGAAAACATCCTTCCAAGAGGGTTGGGT
CACAACCAAAATTGATTCTTCCTACAGACTTGCAGATAAACCATCGCAAT
ATTACGTTGTGGTGACAAATGTACACCAATCAGAAGTCAAGAAAATGTTC
AAGGAGAACAAAGATGGTGGTACTTTTGTTTACACAATCAAAATCGACGG
AAAGCAATTGGCTACTATTAACAATAGATATCCTCAGTCCCATGATAACA
TGAAAGCATATTTCTCCGATCAATTCAATCCGGCATCAAATGCTGTTGTT
AAAAACATCATCTTCCAAAACACTGACTGTGCTCGTGTTCCTTCCATTTT
TGTTCGCCCAAGAGAAAGTCGATTACATATTTGCACCAACATTGAAAGTT
CCTGGAATTGGTGTAAAGATTCAGCCTCGTTGGCGCTAAACAAGTATTAT
TCCGTCGAGCTGGAGCAGAAAAGGCGGGTCAATGAAGGGTGGAAATTATC
ATTTGACGTCATGATCAAAGGAACAGTACGAAGTTGGACCAACTTGATCA
GTTTCAATAATGGAAAATCCAGTGGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040456XLOC_040456Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064505-proteinTCONS_00064505-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064505-exon-scaffold_418-1575043694:177575..177681TCONS_00064505-exon-scaffold_418-1575043694:177575..177681Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1575043694:176800..176945TCONS_00064505-exon-scaffold_418-1575043694:176800..176945Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1575043694:176225..176390TCONS_00064505-exon-scaffold_418-1575043694:176225..176390Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1575043694:173510..173575TCONS_00064505-exon-scaffold_418-1575043694:173510..173575Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1575043694:172757..173040TCONS_00064505-exon-scaffold_418-1575043694:172757..173040Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1575043694:171877..172317TCONS_00064505-exon-scaffold_418-1575043694:171877..172317Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:177575..177681TCONS_00064505-exon-scaffold_418-1510915933:177575..177681Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:176800..176945TCONS_00064505-exon-scaffold_418-1510915933:176800..176945Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:176225..176390TCONS_00064505-exon-scaffold_418-1510915933:176225..176390Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:173510..173575TCONS_00064505-exon-scaffold_418-1510915933:173510..173575Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:172757..173040TCONS_00064505-exon-scaffold_418-1510915933:172757..173040Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1510915933:171877..172317TCONS_00064505-exon-scaffold_418-1510915933:171877..172317Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:177575..177681TCONS_00064505-exon-scaffold_418-1491911889:177575..177681Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:176800..176945TCONS_00064505-exon-scaffold_418-1491911889:176800..176945Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:176225..176390TCONS_00064505-exon-scaffold_418-1491911889:176225..176390Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:173510..173575TCONS_00064505-exon-scaffold_418-1491911889:173510..173575Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:172757..173040TCONS_00064505-exon-scaffold_418-1491911889:172757..173040Clytia hemisphaericaexon
TCONS_00064505-exon-scaffold_418-1491911889:171877..172317TCONS_00064505-exon-scaffold_418-1491911889:171877..172317Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:171877..177681 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.389865	0.552989	0.254239	0.549648	0.812531	0.75538	2.59817	2.32427	7.37704	6.51104	2.54781	5.57063	26.0816	17.4784	0.0603759	0.107988	1.46335	1.82714	33.6069	35.7513	3.22116	4.51293	0.812749	0.55418	1.71238	1.93579	0	0.0518656	0.354044	0.400794
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064505 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top