XLOC_040456 (gene) - C. hemisphaerica

Overview
NameXLOC_040456
Unique NameXLOC_040456
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_418:171877..177681-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040456 ID=XLOC_040456|Name=XLOC_040456|organism=Clytia hemisphaerica|type=gene|length=5805bp|location=Sequence derived from alignment at scaffold_418:171877..177681- (Clytia hemisphaerica)
GCGGGTCAATGAAGGGTGGAAATTATCATTTGACGTCATGATCAAAGGAA CAGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGT GGAATAGGTATCTTCATGTTTAAGTTTACCCCTCTTTCATTCTTTGCAAA CTTATCTAGAGTAGAAGCTCAGTAATTTAGGACTTCCCGACATTGGTCTT TCTTTGCGCATGGTCCACGGCCAGCCGGTTCGTCCAGCTGTGAGCCGAAT AGAATAGTGGAAGAAACTTAAATTCGAATCGGTAACCCCTGGTTTGTGGC ACCAACGCCTCAGACGCCATCATAATGTTAATGTTGAATTTACACTGTAA AGAATAGTCTACCTACATGCTAGTGCTACCACTAATCCAGAATCCTCAAC CTATCAAAGGAGCAACGAGGTTTTGCTCCTTTTTCCTTCTACACTGTATT TTTTAAAGTACTATATACGCACATCCTTCATCATACTTTCATTCCCATCG TTAATTCTAAACTAGAAGTGAGAAATTGGATCTAAATCGGGATGAAAGAC ACACGGATAAGGATGAGAGTTTGGCCGGGTCCTTTCAATTTGGATTTTTT CCTACAGGGGATGGTTTCTTGGCCTAGCTTTCAAATGAGGGGGGGGGTCC ATATCGAATCTACGATTCGAAGTTATTCCTGAACCTTACAATATGTTGAC GAACTAACATATTGACCGTGGGTTTCTTTTCTATAGGTGCTCGTGTTCCT TCCATTTTTGTTCGCCCAAGAGAAAGTCGATTACATATTTGCACCAACAT TGAAAGTTCCTGGAATTGGTGTAAAGATTCAGCCTCGTTGGCGCTAAACA AGTATTATTCCGTCGAGCTGGAGCAGAAAAGGGTCAGTATTTGTTATAAA ATCTTCAAAAGTTGAATTTTCTTGGTTGATAGAACAATTAATCACACTAA TTTTATAATAGAATCCACTCTACCAATTTATTTTCTTAAAATTCTTAAGA CATTCAGAGGTTTACCGTGTCCGTAAGAAAATTATTACCAGCTGTTATCA GGTTAGCGCATGCCACGCTCTGGTCTTATAGGGATGTGGCGAATGAAACG ATTTGACCTGGTTGTTCAGCAAAAAAAATCAAAAACGCGTTGCTTTTTGA TTGAAAACGATAGCGAAAGTGGCCTATATAGAGTGAATACGTGCCACGCA TAGAGTATTACACCATATGCTCAGCGATAAGGAGCTAGGTAGAGTAAATC ATAAATATTTTCACTTAATTCATACATCATCAATCTTATAGGATGGTGGT ACTTTTGTTTACACAATCAAAATCGACGGAAAGCAATTGGCTACTATTAA CAATAGATATCCTCAGTCCCATGATAACATGAAAGCATATTTCTCCGATC AATTCAATCCGGCATCAAATGCTGTTGTTAAAAACATCATCTTCCAAAAC ACTGACTGTAAGTTACACCACCTTCTCACGAAACCACTGGGAGCTCTCCT CACTGGAGAAATTGGCCAAAATATCGCCCCCGGTGGAAAATTATTCTCCA ATTTTTGTCCCCACTAAAATATTCAGATAATTGAATCCTCACTGCAAAAT ACACGTTTTTTCATTTAGAACCCAGTTTATAAGAAAATTTAGGCTGCAAT TCGTCGAAAAATTAAGAACATCGTAAGAACATGCCCAGCCTCAGTTTGAA AAAAATGAAAGAAACTACAACTTTTTCATCTTTTTAAAGAGTTTTAACCG AACTAAGGGATGTATTTTCTAAAATCGAGAGTCAAATATTGTCCAAATTT TACCAATCTTAAGTGCTCTTTTTTTTGCATGATATTGTCGATTTAAAGTA GTTTGAAAAAATAAGAACGCATGTAAGAACAACATTTTAGGCTGAAAATT GCTAAAGAAATAAGCACATCCAGGCTCAGCCAAATTTTAGGTGTTNNTGT TAGAACGTTGCCCACAAACTGCTAATCAGAACAGATCAGAAAGCAAAGTA ATAATTCTATTGCAGAGNNNNNNNNNNNNNNNNNNNNNNNAATAAACCAG CTGGAAGTTTAGCTCTTCTAAGTGATTACACATGCACTTTCTTGCCTAAA GAACCAACCCCACCCCCCGCCCACTCATCCNNNNNNNNNNNNNNCATTTA GAAGTCAATATTTCCAAGTTCTTGATTTGATTGTCCAGATAAAATTTCGG GGAGAAAAATAGCCTAAATTAGAGGCCACGGGCTTTTAGCTAAGCATTAG TTTTTCTGTTGGGATAATACTTGGGGGAGAGTAGGATAAACCAAATAAAA TGGTAAAATAGTGTGTATGTAATAAATAGTGGTATATTTGGAAAAAACCT GTTTCGGGTTTGAAAAATCTTAAAAAGGAACGGTCGCCCTAGCCAATGAA ATTACGACAAAGTCCAAAAAATATCATTTTCAGTTATAACACTGAAAATT TCTCCGATCTTGTTCAAATTTACACAGGAATTGTGTTTTAGTATCCTTTA GTGAATTCTCATAGTGATATGTTTGTATAAAATCTGTGTCGGGTTTGAAA AATTAAAGGAACGGTCGCCAGCAGCGATGAAATTACGACAAAAAGTCCAA AAACAATCAATTTCAGCCATAACACTGTGAAAATTTCTCCAATCTTGTTC AAATTTACACAGGAATTGTGTTTTAGTATCCTTTAGTGAATTCTCATAGT GATATGTTTGTATAAAATCTGTGCTGGGTTTGAAAAATCAAAAGGAACGG TCGCCAGCCGCGATGAAATTACGACAAAGTCCAAAAACGATCATTTTCAG CCATAATACTGTGAAAATTTCTCCAATCTTGAATTCAAATTTACACAGGA ATTGTGTTTTAGTATCCGTTATTGAATTCTCATAGTGATATGTTTGTAAA ATATCTGTGTCGGGTTTGAAAAATCAAAAAGAACGGTCGCCCAGTCAAAA AATGATGAATAATAAAACAACAAAACAGGATCATTGGGCTCTTCCAGTTA AAGTCCGTTATAGGGGGGTGGACGACAGCGGAATTCCGAGGCAAAATGCT TTTTTGAAATTCCTGGATTTCCAATACAAAAGCAATTGAAACTCCTGGAT TTCCGATACAAAATCAATTTTTTGGTGCAAAAATCTGGAATTTCTGATAC CTTTTTCAAAACTTTGACAAATTATGTGGAATTTCCAAGGGTTGAAATAA AAAATTGAGCAGAATTTCCGAAGCACTTTGACAAATTATGTGGAATTTCC AAGGGTTGAAATAAAAAATTGAGCAGAATTTCCGAAGCACTTTGAAAAAT TGACTGGATTTCCGAGTGCTTTTTTTATCTGAAAATTCCCGTGTCATCCA CCCCCTATATCAAATTTTTTCTGGAAGAGCCCATTTTCAACCATACACAT AACACCACAAAAACTGCTCAGATCGTTTTCAAATTTGCACTGTAATGTTG TAATTTGAGTATTCTCTTTCGAATTCCAATGGATGTGTGTTTGAAAGTTT CACAGAGTTTTATGGTTTTGTGGTTGTTTTGTTAGTTTGTGCGTCCATAA AACTAGAGAAGTTATAGCCATATGCAAGATTTAATTCATGGCCAAAATTT CTCCAAAGTCTTTCCGCATTGTTATAGACCAGTATGCATCAGAATTCTCA TAAATCATGTCCAAAACATCATGAATAATGATGAAAATGATCACTATCTT TCACTGAGATTTGCAGCTAAGCCCACTTTCGGCAGTCATCTTTTTCTAAA TACTTTCGCAATATTATCGAAATCCAGATATCCGTTTTTATTAAATCGGA ATAGATTATCGGATTAGATAAACAAACAAAAAATGTCTTGACCGTCGGAA GAGAGAATTAAAGGCTCCTAGGCCGGAGCAAAAACGTGTATTGTGCTATT TTGTATATTTTTTCCATCCCCACTGACTTTTCTGGCTCAAAAATAATGGA ATTCAAATCCCCAGCCATACAAAAGCATGGAAATATCCTGAAATCTAAGG ACATTTTTTTGGTAGAGGTCGATCAAGGGATCGATCCTGCGCACATGTAA TTTATGTAGTTGGCTATGAAAATCAAAATAATAAAAACGACAATTTTCGA TTTTAGCAATATTACGTTGTGGTGACAAATGTACACCAATCAGAAGTCAA GAAAATGTTCAAGGAGAACAAAGTAAGTCCATAATACTTACTTTGATTTG TTACTGTCAATTTCCTATAATTTGACCCACTATTATTTAAAAATCTTTCT GTTAATCAACCAAGCAATCTGAAATAAGAAACGTCTTACTCATCATTTTC ACTTGCCTTAAGAGAGGCTCCACTGGAATTTGTCCTATAAATCTTTTGGT TAAATGTAATAGAAATGTAAAAGAAATTATATTTGGAACCTTTTATCTGT TTCCCATTGAGAATAGATTATAATAGATTGTAGGTAGCATGACACACATT AGGATGTCTTTCTTATTTTGCTCATAGAGTCCAATAGATAGGTCTGATAT GTTTGATTTGGATAGCTCAGTAATCTTGGACGTTTAGATAGTCTTTTGAT TGCTTTAACTATGAACTGAACGTTCGTTCTTCGTTCGTTTAGTATTTCAT ATATACTCACTATATATTACGACTTATTCTTCTCTTCACAGCCGAAGTAT TGACATTCGACAAATACCAATGTACGAAAGAAAATGAAATCCATATGAAG TTGAATCTTCCAAAAAAACCACAACTTATTCGTGGCTCATGCGTTGAAAT CACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACTTCA TTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGTCAA AAGAAAACATCCTTCCAAGAGGGTTGGGTCACAACCAAAATTGATTCTTC CTACAGACTTGCAGATAAACCATCGGTGAGTTAGGATATTTTTCTAAATA GTCGGTTCAAAGAAATCTTTTATTTAAGATTGTATCCAATTTTTGCCACA CAACATACGCATCTAAAAAGTATCACAGTTTCCTTGTTCACACGAACAAC ACTGACACCACCGTGCCACAGATCTGCCTATCCCAAAAAATGAAAAAATG TTTCATTTCCACTCTACTCAAAACCACTCTGACTTTTATCCCCACATGAT AGGAAAGGTACTAAAATTTTGGGATTCTGATTTTCAAGCCCGATGGATTT TGTCTCCTTTTTGGATTTGAATGCTCAATTTCATCCTCGATTTTTATTAC AGAATTTCACCATTATTCCACAAAGTTATAAAAGATCATGACAACTATAC CTTTCATTCATTCAGCATTATATTTTGCAGCCTAAAACGACTAATTTATG TTTTACCTTTACAGGTTGGCTTATTCCTGAAATCATATTTCAATGATAAT TGTCCCTTGGTTAGTTTCGCTGCATTCAAACTGTTAGATGGTCCTTGCTG AACCAATTATGGTTAAGTTTGGGTATGGATTTCAACCCTGGATAATGAAT TTGGTATATGTAATCATCGATCCTTTTCTTCACGAGTGTGATCGGCGATG CTATCAAAAGGTCATGATTTTTCTAATTTTTATTTCCTAATNTGCGATTG GCGATGCTATCAAATGGTCATGATTTTTCTAATTTTTATTTCTTAAGTTT TATCTTGATATTGGTTATGATTTATTGAAAGCATAATCCTAATGAGATTT TTTTGATAATCTTTCGTGATAAATAAGTTCGGGGTTAATTTTTTATATCC ACACTATGGGAACGATAGTTTTTAGTTTCTTCAAATATATTAAAAACAAA TGCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064505TCONS_00064505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064505-proteinTCONS_00064505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:171877..177681 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.55 0.25 0.55 0.81 0.76 2.6 2.32 7.38 6.51 2.55 5.57 26.08 17.48 0.06 0.11 1.46 1.83 33.61 35.75 3.22 4.51 0.81 0.55 1.71 1.94 0 0.05 0.35 0.4