TCONS_00064502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064502
Unique NameTCONS_00064502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1436

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064502 ID=TCONS_00064502|Name=TCONS_00064502|organism=Clytia hemisphaerica|type=transcript|length=1436bp
aaaaaagaaaataattttcaaatttttataaaactttcAACAGATAACAG
ATGATTCAACAGCTCATCACAATGTAAGAGtgaAGAATAATAATAAGAAG
AAGATAATCTAATAAATTGTTTTTGGAGACAATCAAAATACAAGTACAAC
ATGATGACTGAAGAGGAACAAATGAGAATGGAATTGCAAAGAATGCAGAG
GAGAGCTGATGAAGTCACAGATGAGTCTCTTGAATCAACTAGACGAATGC
TTGCATTAGCTGAAGAGACCCAAGACACAGGAATAAAAACACTAGTAGCT
CTTGATGAACAAGGAGAAAAACTGAATAGAGTTGAAGAAAATTTGGATCA
AATCAATGCTGATATGAGAGAAGCAGAGAAAAATTTGACTGGTCTTGAAA
AGTTTTGCGGTTTATGCATTTGTAGTTGTAGAAGGAAAAAAGGCTTTGAA
GATAACGAGCAGTACAGAAAAGCATATTCAAACGATAGCAGCGATGACAA
AAATCATTCGTTTGGTTCAAGCTCTGATAGAAATGCATCAGGTGCTCCAA
GTAGTGGTTACATCAAAAAAGTGACTGGAGATGCAAGAGAAGACGAAATG
GACGAAAATATTGGTCAAGTTGCAGGGATCGTAGACAACCTTAAAATGAT
GGCAATGGATATGGGAGGTGAACTTGATAAACAGAACACTCAAATTGAAC
GTATAACTGATAAGgCTACATCCAATGAGGTTCGACTTGACCGAGCCAAT
GAAAGGGCTGAAAGAATActtcgaaaataatgaaaatctgGCAATAAAAT
ACTCCTCAGTAAGATGTATAATTTATTACACTGAAGTATCACCGATTCCA
AACTTAAAAGCctcgtttcgaattttgaaagcGTGCTTCCTACCAATCGT
TTATCTTTATACGTTTTTACGCCCATACCGTAAAATCCTGCTTTGTTTAG
GTAtgttttacaattttttgtttttcctgtGTGTCTATGGGTTAAGTATG
TTAAATTTGACTATCCCCTCTTTGGAAGTCCCTGTGAGTGTCAGGGACGT
CTTCtgtcaaatctttttttcttttccttgtttattcttttcagtttttg
agtaTCGTCATTCGGTATACAATTTAGttttgataaatctttttttctgt
acttttattttttgttattttttacagattatttttataatttttttagc
ttttgtaTATTCGattattcttcaaatttttaaaataattttttaaatta
caaaGTTTATCAGTCAATTAATGGTATCgttatttcaaaattgtcaatca
ttttttaattaattcTGTTTTATACATATATTATACTTcatattttgata
caaaaaaataatccCCTATCATTGTGATCGGCAAGTTCAACGACTTTTGT
TGATGTTTACTATGGTTCGAAAATATAGGATAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_418:112094..127429-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064502 ID=TCONS_00064502|Name=TCONS_00064502|organism=Clytia hemisphaerica|type=transcript|length=15336bp|location=Sequence derived from alignment at scaffold_418:112094..127429- (Clytia hemisphaerica)
AAAAAAGAAAATAATTTTCAAATTTTTATAAAACTTTCAACAGATAACAG
ATGATTCAACAGCTCATCACAATGTAAGAGGTACTGTATACTCTGATTCC
TTCAATTGTATATTTTTGAATTTTTGTACATATTTGATCATATCTTTTTA
ACTCACAGACACAGACAAAAATATTTTTTCTGTCTGGCTGGATCAGATTC
TTTTAATAAAAGTAAAAGACAAAGCTTTCTTCTCACAGTTAGTGGAAGTA
CCTCCATTTTAAGCATGTTCAAAGTTCACAATAACAACTTTCTTTTTGTT
GGAAAAGGAGGAAAATGTAGTTGAAGGTTGAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTCAGGAACAGTCGCCTTATTAGGAGACGCCTCCT
GATTAGGAGACCCGTCTCCTAATCAGGAGGTTCACGTCTCCTAATCAGGA
GACGGGTGTAATTATCTCCTGAACAAGCAAATTGCGCATGATTTGATTGC
TCCCAATGGAAAGAGCACAAAAAATTGATTCCATATGCAGTTAGGGAAAC
CATCCAGGATCCTGCCATCCTATAAGCCAGCAAAAACTGAATGCCACTTG
TAAACTTAAGTTTCTTACTATTTTCCATCAATAACAACCAAAAACATTGC
TACTTCCCAAAGCTGGAGACCAAAACAAATTATCTTCCAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAGTGCGAAAAGACACGAACGTCATTTTTTAATGAGTGTT
GTTATGATTTTTTAGATCGCGGTCGCGTACAGGAACTCGCCAAATGTTCC
TAACTGATATGGTGATTTTCAGAAAAATCCACCGGTGGAATCAAATAATA
CAATTCTAATAATCCATAAGAACCAATCAGAAGTAAGAATCTATCTTCTG
AACAAAAGCGTCTCTAAAAGAAAAATGGCGGACATGAAAAAAATCAAGGG
GGTCTTCCTTGCAGTGCTTTATATTAGGATTGTGATCGATTGCACCGAGA
AATGTTGATAATTTTTTAAAAACTTTACCAATTCGAGGCTGCTCTTTCCG
TTAAAACTAGTTTCAAAATGTGCGGAAAAGCCTATAGCCCTTGGTTAAAA
CATAGCTGTCAACTTTGCCTTGCAAAAATGCGGGAGAGCTCCAAGTCGGA
AAAATTTTCTCGATAATTCAATTTTTCCGAATCGGAAAATCAGGAAATCG
AGGTAATTTTCCTGCAAAATCCGATTTTATCAGAATTTTTTTTCCGGAAA
TAGGGGAAATCGGGAAATTTTACGTCTCAATTTTCCAAATTCAGGAAATA
TAGCCATTCCGCTCTTTCAAATTCTGATTTTTTTTTAAGAAATCGGAAAC
TTTTTGGAAATGCGGGAGATGCGGGAGAAAATTCTGAAAATGCGGGAGAT
TTGGCTGAATTTTTTTCCCGCGGGAGAAAGCGTTGGCATGTGGGAGTCTC
CCGCCCAATGCGGGAGAGTTGACAGCTATGCTTAAAATAGACCTTTTTTC
AAAGAGGACGTCCTGTTGAATAATTATGTAGTCCTGCCATAAAAACAATG
AAAGAGCCATGCATAATTACTGTATCATGCATATTGTAATAATTATGCGT
GGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGG
CCTCTTTGAAAAAAGGTCTATTGAGATCAAAGTTTTATGTCTCCTAATCA
AACGACCCCAAGCGACCTACATGTCTCCTAATCAGGAGACGTCTCCTAAT
CAGGAGGCGTCTCCTAATAAGGCGACTGTTCCTGACTGTTGTACCTCTNT
CCTAATCAGGAGACGTCTCCTAATCAGGAGGCGTCTCCTAATAAGGCGAC
TGTTCCTGACTGTTGAAACTTTGTATGTTTATCAGAAAAAGGGTTAGGAA
TTCATATCAAAAATCACAATCGCTAATTTTAGTTCTTTGATTTTCATGTA
GTTTTTTTCACTTTTTTGCTTCTTTAGCATGAGAATGTCCCAAAAAAAAG
TTTATATTTCTGCCAAAATGAATTTTCTTTTCCTTTGCGTGGGGTTTCTC
CTCAGAATTAAACTTATTCTTTACTTATATATAACTAACTTTTTGTTTTG
CTCCTCCATTTCCAGAGGCCCCTTGCTTGAAAATGGGTCCTATCACCTTT
TTTGACTCGTTTCAACCTTTTCCAAGCTAATTTTCTTCAAAAACAAAAAT
AAAACAATGCGATGTCTTCTTTTTTCAAAAAGAGATATATTTTTTAACTG
TTTGCGAAACATTTTTAGGCGGCAATCACAAATATCTTTGTTTCACATCG
CCCGACCGACTCTCGAAAATTGAGTAGAATTGAGTCGGTGATTTGGTAAA
TTTGTCGGACTCTTTATGTCAATGACCTTTCCTTCGTTCAAAAATTTTAT
TATTCCCGATTTTTTGCGAACGATTTCTAGCGCATTCGCAGCATTTTGAC
TTTGTTTATCATACATGCGCCATTTTGGGTCAGAGGTCACAGTGTTCAAA
GGTCATAATTTTAAACCACCCATATAACACGCAGTTGTTTTAGCTGCTGG
CTGGCTGGCTGGCAGTATCAAAGAATGTACTCCAAAAATGGATGGAAAAA
TAGAAACCCGAAAAATTTTTACGACCGACCGACCGACTCACTTTTTAGAC
CCAACGAGGACGCGAAATGAAGATATTTGTGATTGCCGCCTTAGTATTTT
GCGATGTTGTTTGGAACAAAATGCGAAAGTATCACCAATTCATTTCTCTA
GAAATTCTCTAGAAAAGCAAAGTAAAACTTGAAGTATAAGAGATTAAAGA
CAAAGCAATGTATAGTGAAGTTTTGAAGTAACGAGTAGATAAAGCAATAG
ATAAATACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATATTAACCT
CTGAAGACCAATAATAGAAATTTTATTGCGCATGTGTAGAAAGAATCAAA
GATGAAGAGCAAATATTACCATACTAATGTCTAGCAGACTGTATCAGTAT
GCAGTTTACTATTTACGAATTCCCCAGAAACCTCCAAGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGAAACCTCCAAGTGTAATTGAAATGAGTTTATTTCAAAAGAAATCTTT
TACATGATCCCCAAATGTATAACAGTAATTACTAAACTTTTAATTATGGA
AAGATCACTTTAATTGAATCGAAATAATAGACAGACTTTATGTTATGATT
CTCTATCATTGACTCTTTTTACAAAGCATTGATGACTTTTTTAAGTTGTG
CTTTCAATGACGGGAATAAAAATATCAACTTTGAACTTCATCCAAGATCT
TGGATGGTCGTCATGGTTAGTTTTGTCTTCGTTGATTGCGCGCTGAATAG
AATCTCGATTCGTCGGCACAGCATCAATATATGATTTTGACCTGTGCTAT
TCACGCCACGGTAATAGATAAACAAATGAGTAAAATAGCGAAGTGGCGAG
TTGATAAAGCAATAGATAAACGAGTGAATAAATTAGCGAGGTAGCAAGTT
TATAAAGCAATAGATAAAAGAATGAAGAAAGTTGGAAGGTAGCGATCATA
GTGTCCTCCCCCCCTGGATTCAGGGGGGAATGGGTTTTGAGGTCAAAAGG
ACGTATAGGGGGGAAAGAATTTTTTTTGAAGCCAGGNTTAGGCATGGGGG
GAAGAGACCCTGAAGGACACTATGGCGATTTTATAAAGCAATAGATAAAC
AAATGTGTGGAGTAGCGAAGTGGCGAGTTGATAAAGCAATAGATAAACGA
ATGAATAAAGTAGCGAAGTGGCTAGTTGATAAAGCAATAGATAAACAAGT
GAATAAATTAGCGAGGTAGCAAGTTGATAAAGCAATAGATAAACTAATGA
AGAAAGTTGCAAGGTGGCGATTTTATAAAGCAATAGATAAACAAATGTGA
GGAGTAGCGAAGTGGCGAGTTGATAAAGCAATAGATAAACAAATGTGTGG
AGTAGCGAAGTGGCGAGCTGATAAAGCAATAGATAAACGAATGTGTGGAG
TAGCAAAGTGGCGAGTTGATAAAGAAATAGATAAACGAATGAAGAAAGTA
GCAAGGTAGCAAGTTGATAAAGTAATGAATAAACAAATGGGGTTCGGTTA
TTATCAGTTAGGGTTAGGGTCTGAGCTCGAGAGTCGCAATATAAGGCTGA
AGGCCTTCTTAGGGGCATTTGTACCCTGTGACTTAACTTAGGATCCCGTA
GGCGCACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGTCTGTAAATTACA
CGCTATAGGTATCTTTAGGTATTTGTGAATGACAGCTTCCTGTCGTGTCT
CGTTGGCGCAAGTGGTTAGGCATCAGGTTTGTAAACCAAGGTTGCTTGCA
TTTTGGTGGTTCGACCCGGGGTTGGAGACCTGTTTCAGGCCGGAGACCTG
TTTCAGGAAAATACAATTAGAAAACAACTAGAAACACTTGAGAAAAACAG
AAAATCAGGATAGAAGATAAGAAAGTAGAAAATAGGGGGGAAATAAAGAC
GATGCATCCTGGAGTATGATATTGTTTGCCAACCAACAGAACAGGTTTTA
GGTTTTTTATCCAGGCAAAAATGCCTGAAATTGGCCCATTTTGGGCATAA
AAACAACCGGAGAATCGTCAAAAATTGAAAAAATCAAAAAATATCTCAGA
TTTGTGTTATTTGGGTCCAAAAAAATTAAGAACCACTAATTTTGAGAAGA
AAAGTCTCTACAGCCCACTGCTAGTGGTATAAAAATCTGAACTTTATTTT
TTAACGTACTTTGAAGACCTCATAATATTTTAGGACCCTCCCGGCACTCC
GGAAACGTCCAGAGCAAAAAGTGCCGTTTTTCGTGCTCACTTCCAGTGTT
CTGTAGCACAACTTTCGGTAGTCTGAATTGCAGAACTCTACAAAACCGCA
GGTACAGTGATCTACCACCCGCTTTCCAGTTCGGTTATTTTATTTCAGTG
TATTTTATACAGAATCTTGGTGAGTTAATAATTTCTTTGATTGACATTGA
TTTGCGCTCAAAAACAATAATTTCAAACGTTTTCAATAGAATGTTTATGA
ACCTATTATGCCTATTGACATGGTCATTGACCTTTATAAACTTAATTTCA
GCAAAAATTCTTATTGTGCTTTCAGTATCGCCAGATAGAAATTTTCACTA
GGAAAATACTTCAGAGAGTTTTAGAGGTGTAAATTTGACTATTGTCATTG
ATTGTCATGGTATTGACAAAATGACATTTACTTTCACAAATTCAAGGACA
AAATATTTTTCACGAATATAAACATTCACGAATCAGGTGACCAAAATGAA
AATTTTTACTTGAAAAATGGCTTTAAAGTTTCCAATAATTCATTGCGAGT
ATGAACCTTCGCGAATCACCTCTTTAAGAATATTCAAAGAGATATATATA
AATTACTTTTACAAAAAAGGCCAAAATGCACAAAAAATTGCGAAAGTTTG
TACGCCTAATGTATAATGAAATTAAGATATTTTTACCCTGAAGCTTTGAA
AATCACAACGAAATTCTCTTACTGGTATATCGAAAATTAGAACCCTCATA
TGCATCCTATTCTAGCCTAAAGCTTTTGCAATTTTTGACTTGCTGCAACT
GATTTGACATGAGGATCTACTGTATAACCCTCGTTTTAGTTTAAATAAAT
GTAGGTGTAGGTGGCCCTTTAACGAAAGCTATTTGAATTTGTTGGTACCA
GCGACTATGGAACCTTTTAGCTCTCTCCTAGCAGCCAGAGAGTGAAGCCA
CTTTACCATTTCCATGTAGGTTTTTTGTCTAGTGCTATTGTCTTAGTTCT
GTGAAATTTCTTTTTCAGTGAAGAATAATAATAAGAAGAAGATAATCTAA
TAAATTGTTTTTGGAGACAATCAAAATACAAGTACAACATGATGACTGAA
GAGGAACAAATGAGAATGGAATTGCAAAGAATGCAGAGGAGAGCTGATGA
AGTCACAGATGAGGTTAGATGTTGTTTTTAAAATTCATACATTGTCAATG
CTTAATTGAAGTTTATACAGGGTAGATTTCCTTTTTGAAGACTCTATCAA
AAATAAAAGGGTTGGAGTGCTCTTTTGACGTAAATAGTAACCACATGCTT
CCATTGGACTAGAGTGGTAAAGTAACATCATTTTATTTGGACATATTGCT
AAATATTATTTGAAACACTCTGCTCTGTTATTAATCTTTTATTTTTTCAT
ATTCTTAGTCTCTTGAATCAACTAGACGAATGCTTGCATTAGCTGAAGAG
GTAGGTACAATATTTTTAACTAGCGCATGGTATATTTCAGCATTTTACAA
AAAAAGATGAATCGCAAAAACATTATGCATTTGAAATGATTCAATATAAT
TGCGCACCGCATCAAATGTAGAATAATTTTCTTAATTTCTCTTTTAGACC
CAAGACACAGGAATAAAAACACTAGTAGCTCTTGATGAACAAGGAGAAAA
ACTGAATAGAGTTGAAGAAAATTTGGATCAAATCAATGCTGATATGAGAG
AAGCAGAGAAAAATTTGACTGGTCTTGAAAAGTTTTGTGGTTTATGCGTT
TGTAGTTGTAGAAGGTAACAGATACTCTTGATGACTGCACAATTAAATGA
ACATGATCAACACAAAACCTCAGCACAATCTGGCACAATGCATTTTGTCC
ACGATATACAAAAAATTATCAAATCTTTGAATTATTGGTCGTTGCTGCAA
GCTTTTATGAAACTTTCAATATCAAAAATTATTAAATGGTTTACAAAATA
AGTTTCCGTGCATAGTAAGATTGAATTCTTACTTAAGGAGATTTTCATAT
TAATTTAGCTATTATATACTATATAATAACCCCTGGTTATATCTATAATC
ATTGCATTTTATTGTTTACTTTCCAGGAAGCAAGACTTTGAAAGTTCTGA
ACAATACAAGAAAGCTTACAGTAAAGGAGACTCAAGTGGCGGAGGAGCCG
GAAGTTCTGGACGGAACAATATGCAAGGAGGTTATGATAAAGCTCCGGCT
ACAGGATACATCCAAAAGTATATATCTTTACTGTTGAGAGAGAAAGAAAG
GCACATGTGTTTGAATAAATTTATCACACTTTGGAGTTTTCAGTATGATA
AGAAATTGCTTACAATTCTATCAAAATTACCTGTAACTTTGAAATAAAGT
GGTTGCATTTTCTTCCTTATTTTTTTAGAGTGACTGGAGACGCAAGAGAA
GATGAGATGGATGAAAATATCGGGTTTGAATTTTTCAATATGCATTTTTT
TTCTTGTGTGATTCATTACTACATAAATCTGCTGTTCATGTTCATGCTTG
TTTTTTCACATTTAACTATGTATTCTTGTATTAAAACTATATTTCTTTTA
GCCAAGTTGCAGGCATTGTTGATAACTTGAAATCTATGGCAATGGATATG
GGAGGTGAACTTGATAAACAAAATACTCAAATTGATAGAATTACTGATAA
GGTAACATTATTTCATATTCTTCATTTTACACAACTTCTTCTTTTACTAA
ACTACAAGATGTGAAATTTTCTCCAACCACGTCGTTAATAATGGTTGGTT
CTGTAGTCTAAATTATATGTTTTAGATTTCCTTAAAGATGTTTTGCTCTT
TTTGTAAATAAGGGACTGGATTTATTCATTTGATTAAACAGAATTCTTTC
AAGTTTCCTTTGATCAGGAATGTCAAACAGAGAATTTGCTAACTCTTGTA
ATATTTTCCTTATGTAATTAATACACTATAGTATAATTTTTTTCTGATTT
CTTTTTCTGCCTCAAACATTGTGTTTTTCATTCTTTAGGCAACTGCTAAT
GAGTCAAGAATTGATGTTGCCAACAAAAGGGCTGAGAATATTCTGCGAAA
GTAGATTGGGCTCGAATTGAAAATATGGTTGCGGGCTCACAAAATCAAAT
TATGCCAAATAAATTAGTCCAGAGAGACGCACATTTTAGAATGTTTTTAG
AAGTAGATATTAATTTTCCATTCATGTGCTTCCTTAACCACAGCCAATAT
GTAGGTTAAAGGAAGTGCTATAGTACACCCACTAGACATTTTCTACATTT
ATCACGTGTAGCTTCGTTGAAGAAGGAAGTAGGATTGTCTATCAATTTGC
ATTGTGTGTTTATTCTTTTGGTGTCTTTGAAGTTTTTTTTCGAGGCTCTC
TTCTATATGTACAAATTATAGAATGTAGATTTTTTGACATCGAAATTATT
TATTAAGCAATCCTTTTTGCTTCTCTTTTAAATATTATTTAGCAATATTA
TAACCCATCCAGGGACAAAGTTAATCATCTAATTTTGAAACACTGACAAT
TATTATATTTATTCATATNAGCACAGTTAATCATCTAATTTTGAAACACT
GACAATTATTATATTTATTCATATTGTTTTGATTTAAACTAACAACGTAA
CGGTTGGGGTGCATGGTTTTGATTTGTATCATCTTGTTCTTCTATTTAAC
TATTTAGGCCATAGTTTATAATTTTTAGGTTCAGTTTATTATCTTGTTGT
CAATATCAAGTTTGAATGGGTGCACCTGTTATATTTATTTTTCCTATTTT
TTTATTATTTTACCTTAGGTCAATGTTTGGTATTCTTGTTGCCAAAATTT
GTACAATAAAAGTTAATGTCTGATTTTTTTTCTTAAAAAATTCAATATAT
ATTTTTACACTGAAACTTTGAGGAATACATTTATGCAGTTTTTATTGTTC
TAGGGGATTTTTAATGAACAATATTATAATGTTTTTGCGATTCAATATCA
TATTAATAATTTTGCGAATTCGCCTCCAAAGCAATATCAAGGCTGAGAAT
AATCTGAAATAGCACTGGTTCGTTTAATAATTGTAACCTTAGTAACAGAT
GCTCTATTGACTGGACTAACAAAACAAAAAAGGTATGTTTAATAATAATT
ACTCATTAATTTCAGTTAATTAATTTCAATTTCATTTTTTTCATATTACT
TGTTGATTTTGCAATCTTATAATGTTTGAAAACTGTACGGTAATTTCATT
GAGGTAGCTGTCTTCCTGACTAAACCAAGAACTAATTACAATAGCTAATG
AAATTCTGGTTTGGGGATCTCATTAATTTTGATTCAATAGTGATATTGTT
TGAATTGTATGAATTGTTTTGTCCACAGAAAAAAACGAATAAAAAGAAAA
CAATAAGAACAACAGGAAAAAAAATCAAGGAAGATGTTATCTGAAGATGA
GCAAATGCGCTTGGAATTGCAAAGAATGCAACGTCATGCTGACGTCATCA
CCGATGAGGTCTAATATAACTCTTTTTTTCTTGATTTTTGTGATCATAGA
AAAATACATTGCTTGGATTTTATGATAATACCCAGGACAACTTAGACCAA
TTTACATTTTTATTTAAAAAGATTTGAAAGGTTTCATAATTCTAAAGTTT
ATTAACTTGTAAGTGTTATTAAAAAGCTTAACTCTTTTGATATATTTTTT
CAGTCACTTGAAAGCACACGGCGCATGGTCCGCTTAGCAGAAGAAGTAAG
TATTATTTTTCTTATAATTTGAGTATACTCCGTCGAAACTCATACCACAG
ACATGACTAATCCACGGATCTTAGACTGGCGAATTCCTAGCAGATGTATT
GTAATGCCATTGATATGCCCTTGGCAGTAAATCAATCTCTACACTCGTGA
ATCGTAATATTTTATTTAGGTCAAAATAAGACCCTTGAATACCTAGGCGA
AAATAATTATCCAATATTTATGATCTTTAAGGTTGGGCTTTTTTTAATCA
TCCTAAAGTATCCAAGGTTTGTTAATCAGACAAAAATCGAAATCTTTCCT
TGCTCAAATTCTTTTTATTCTACTTTAGACCCAAGACACAGGAATAAAAA
CACTAGTAGCTCTTGATGAACAAGGAGAAAAACTGAATAGAGTTGAAGAA
AATTTGGATCAAATCAATGCTGATATGAGAGAAGCAGAGAAAAATTTGAC
TGGTCTTGAAAAGTTTTGCGGTTTATGCATTTGTAGTTGTAGAAGGTATT
ACCTCTTAAAATCTCAAGACGGCCTATTAAGAAATGCTCAAATTTTAGGG
GACTAGCGTGTGATTTATGAGATAAATGTTTTTCCAAATCCTAATCATCC
ACTCTAGCCAGTCGATAAATTTGTTAGATTCCAACCGACTAAGCAGTGCA
AAAGAATAATCTGTTGAACCAATCATGTACCACTATGAGATTGCTTTCGT
TTCCGATGTAATATCCTTATTTAGTTTACGATTCACAGTTGTGGAAAGAA
TGATTTCCTGAGTTCAGGAAAGTTGATCTTGTGCTTTATATTGACGAATT
CCATGTATCTCTAAACAAATCTTTAAAAATATAAAAATACAAATTCTAGT
CTTGTAATACATTGAATTCTTTTCCGCAGGAAAAAAGGCTTTGAAGATAA
CGAGCAGTACAGAAAAGCATATTCAAACGATAGCAGCGATGACAAAAATC
ATTCGTTTGGTTCAAGCTCTGATAGAAATGCATCAGGTGCTCCAAGTAGT
GGTTACATCAAAAAGTATGTTTTGGGAAGATCCAAGAGGATGCCTACCTA
CATTTTTTAAGAAAGAGGCACCTTACCCATAGATTTATAAAGCCCGAGGG
GCTAGATGTAAAGCTTTTGCTGAAAAGTGTGGCGTGGTTAGGTAGGAAAT
CCTACCTAAGTCACGTGACAATACAATAGAATGTCAGCGATTGACCTATC
AGAAGATTCGCGGGTTTTCGAAAACAATAGCAACAATATTTTTTTCGATA
TTCACTTTTTTTTGCCTGCGATGGCTTAAAGCCCGACATCTAGCCATTCG
GGCTTTATAAATCTATGGCCTTACCCCAAGTAGACTTTATTGGCGTGGTT
GACTTTTGAACACGTATTTCAATTCTAGACATTTATTTAGTCTCCCTAAC
AAATCCATTAGCAAAGGGAAGGGCTTGGAGAGTAATCTAAAACTTAATTA
CTCCTCTCATTCCCTTACAGAGTGACTGGAGATGCAAGAGAAGACGAAAT
GGACGAAAATATTGGGTTTGGATTTTCTTTTTAAATGATTATTTGATTTT
TTCTTGATCCGTAAACTCTTCATAGAATATTCCTATAAATGATGGAGTAA
TATGTATTATTTAATACACGTGACCTATAGCGGTAAACACATCAGGGACT
CAGAAGAAAATTCTTTCAAGGTTACAATTATACTTAGTCTTATATCAAAT
TCATTCTTCTCGGATAAGGTCGAAAGATTTCTATTCTAGAAAATTAGTTT
TTTAAAAAGCAAAGTTTTTTAAAAAACAAACGAATCTCATTGGGCTGCGT
GGGTACATCCCTGATGAAATAGTTTTTATCATAGGGGATGCGAATTAGAC
TCGAAAAGACTTTCGCTTGGCAAATTTTTTTATCTAGGCAAGTTTTTTTG
TGATGTGACGATTTTAATTTTGTCACAAAAAATTTAATAAGAAAGCAAAT
TTACCCCCTTGTTAACCATAATATCCTTTATCGGTGAAGCAACAAAGATG
AAGGATGAGGGATGCTGGCAGCCAAAAAAGTCATGTCTCTAAATTTTCAT
TTTATTTGAATTTCATAATTATTTTCAGTCAAGTTGCAGGGATCGTAGAC
AACCTTAAAATGATGGCAATGGATATGGGAGGTGAACTTGATAAACAGAA
CACTCAAATTGAACGTATAACTGATAAGGTATTGTCTAATAGTTTAACGT
TTTTCTCTAACTTTATGCTCAGTCTGTCATTGATATAAAACTGTGACATA
GAATCAATAGAAGTTGTTATTGTTCGCACACATGCTGTTAAAATCGATTT
GCTTCCTGGAGATCTCGTAAAAAGGTCTTTACTTTAACAGTCAAGGCTTT
AAAGTTTGTCTCGAGAACCAAAAAGGTATAATTATGAAAGAAATCGAATT
AAATAGCGGTTTTGCGTTTGTTGAAAAGATTTGGCATTTTTTGTCTGATA
GACATTGTTTAGCATTTACAATAACAAATTCAATGGACCCTGCTCATGAT
TAAAAAACTTTTGCAAAGAACTTCTTTCTATCTTAATTATATTTTCCTAG
TCAAACAGTGTTATTATCTTTTTTATTTTTGGACCTACCCCGGTGGGGTG
GAGGTCCTATAAATTAACCTGTGTTCGTCCGTTCGTCCGTTCGTCCGTCC
GTTCGTCTTTTACCAACTTTTCTCAGGAATGAATCATAGGAATCTTTTGA
TTTTTGGTACAAAGGTGCAAAATGGTGGTAGGCAAAATGCGACGGAGCCC
GATTTTCGAAAAAAAAATATTTTGGGCAAATTTAATTTTTTCTGATTTTT
TGCATGAAAGTAGGGTACCATCATCATAGGTAAAAGATGGCTCAAGCAGA
TTTTTGCAAAAAAATTTTGTTGGCTCAAAAGACGCATGTTTATCTATAAG
AATCACTATTAATAAGCACACATCAATGTTCTTAGGCAAATTACTCACTT
TTTTTATGAGATAGATGTCTTTTTTGTTCATGAGGGCTTACTTTTGAAGA
ACATGTGTGTTTAGACATTTTGGTTACTTGGCGTGTTTTTATAGAAAAAC
TGACCAAATTCGATATTTTTTTATAAGCACATTATCAATTATTAGCTTTT
CTCGAGATTGGCTCTTTCATTCTTTATGCTTTTTTGCACAGAGATGCAAA
ACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAATTATGTTT
TTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTT
TTTGAAATATTGGATCATTGTTTTTTCTGCTTTTTTGCATGAAAGTAGGT
AAAAGATGGCTCAAGCAGATATCTGTAAAAAAAGAATTTTTCAGCTCAAA
AAGGCATCTTTATCTATAAGAATCACTATTAATAAGCATTCAATGTTCTT
AGCCAAATTACTCACTTTTTTAATGAGAAAGATGTTTTTTTGCTCACGAA
GTCTTGAATATGAAAGAATACTCTTAGGTGCCAAATAAACGGGGGGGTTC
GAATAAACGGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGA
CCTAATTGCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGGGGGGTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGACC
GTTTATTTGGCACCTAAGAGTATTTCAAGAGCATGAAATTTTGGTTTCGA
AACGTTTTTTTTAAGAAACAAACAACTAATTTTAATAGGCCGTCACTATT
TGTGTTCTGAATGATTGTCTAACGGTCATGCTCACGTAGATATCAATTAT
ATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTT
TCAATTATTTTTAGGCTACATCCAATGAGGTTCGACTTGACCGAGCCAAT
GAAAGGGCTGAAAGAATACTTCGAAAATAATGAAAATCTGGCAATAAAAT
ACTCCTCAGTAAGATGTATAATTTATTACACTGAAGTATCACCGATTCCA
AACTTAAAAGCCTCGTTTCGAATTTTGAAAGCGTGCTTCCTACCAATCGT
TTATCTTTATACGTTTTTACGCCCATACCGTAAAATCCTGCTTTGTTTAG
GTATGTTTTACAATTTTTTGTTTTTCCTGTGTGTCTATGGGTTAAGTATG
TTAAATTTGACTATCCCCTCTTTGGAAGTCCCTGTGAGTGTCAGGGACGT
CTTCTGTCAAATCTTTTTTTCTTTTCCTTGTTTATTCTTTTCAGTTTTTG
AGTATCGTCATTCGGTATACAATTTAGTTTTGATAAATCTTTTTTTCTGT
ACTTTTATTTTTTGTTATTTTTTACAGATTATTTTTATAATTTTTTTAGC
TTTTGTATATTCGATTATTCTTCAAATTTTTAAAATAATTTTTTAAATTA
CAAAGTTTATCAGTCAATTAATGGTATCGTTATTTCAAAATTGTCAATCA
TTTTTTAATTAATTCTGTTTTATACATATATTATACTTCATATTTTGATA
CAAAAAAATAATCCCCTATCATTGTGATCGGCAAGTTCAACGACTTTTGT
TGATGTTTACTATGGTTCGAAAATATAGGATAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040454XLOC_040454Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064502-exon-scaffold_418-1575043694:127350..127429TCONS_00064502-exon-scaffold_418-1575043694:127350..127429Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:120567..120711TCONS_00064502-exon-scaffold_418-1575043694:120567..120711Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:120280..120321TCONS_00064502-exon-scaffold_418-1575043694:120280..120321Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:116535..116701TCONS_00064502-exon-scaffold_418-1575043694:116535..116701Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:116016..116150TCONS_00064502-exon-scaffold_418-1575043694:116016..116150Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:115515..115559TCONS_00064502-exon-scaffold_418-1575043694:115515..115559Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:114852..114951TCONS_00064502-exon-scaffold_418-1575043694:114852..114951Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1575043694:112094..112815TCONS_00064502-exon-scaffold_418-1575043694:112094..112815Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:127350..127429TCONS_00064502-exon-scaffold_418-1510915933:127350..127429Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:120567..120711TCONS_00064502-exon-scaffold_418-1510915933:120567..120711Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:120280..120321TCONS_00064502-exon-scaffold_418-1510915933:120280..120321Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:116535..116701TCONS_00064502-exon-scaffold_418-1510915933:116535..116701Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:116016..116150TCONS_00064502-exon-scaffold_418-1510915933:116016..116150Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:115515..115559TCONS_00064502-exon-scaffold_418-1510915933:115515..115559Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:114852..114951TCONS_00064502-exon-scaffold_418-1510915933:114852..114951Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1510915933:112094..112815TCONS_00064502-exon-scaffold_418-1510915933:112094..112815Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:127350..127429TCONS_00064502-exon-scaffold_418-1491911889:127350..127429Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:120567..120711TCONS_00064502-exon-scaffold_418-1491911889:120567..120711Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:120280..120321TCONS_00064502-exon-scaffold_418-1491911889:120280..120321Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:116535..116701TCONS_00064502-exon-scaffold_418-1491911889:116535..116701Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:116016..116150TCONS_00064502-exon-scaffold_418-1491911889:116016..116150Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:115515..115559TCONS_00064502-exon-scaffold_418-1491911889:115515..115559Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:114852..114951TCONS_00064502-exon-scaffold_418-1491911889:114852..114951Clytia hemisphaericaexon
TCONS_00064502-exon-scaffold_418-1491911889:112094..112815TCONS_00064502-exon-scaffold_418-1491911889:112094..112815Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:112094..127429 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0506961	0	0	0.576995	2.89697	2.88089	7.5565e-10	2.20511	0	0.00558828	0	0.0985241	0	0	1.3871e-05	0.00821132	4.01291e-09	0	0	0	0.000172505	0.000178785	0.903655	2.6269	2.079	3.01323e-06	1.81377	0.000553283	0.00141066	0.382681
Blast
[Close]
BLAST of TCONS_00064502 vs. Swiss-Prot (Human)
Match: SNP25 (Synaptosomal-associated protein 25 OS=Homo sapiens GN=SNAP25 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.814e-64
Identity = 105/189 (55.56%), Postives = 138/189 (73.02%), Query Frame = 1 
Query:  205 ADEVTDESLESTRRMLALAEETQDTGIKTLVALDEQGEKLNRVEENLDQINADMREAEKNLTGLEKFCGLCICSCRRKKGFEDNEQYRKAYSNDSSDDKNHSFGSSSDRNASGAPSSGYIKKVTGDAREDEMDENIGQVAGIVDNLKMMAMDMGGELDKQNTQIERITDKATSNEVRLDRANERAERIL 771
            AD++ DESLESTRRML L EE++D GI+TLV LDEQGE+L R+EE +DQIN DM+EAEKNLT L KFCGLC+C C + K    ++ Y+KA+ N+             D     A S G+I++VT DARE+EMDEN+ QV+GI+ NL+ MA+DMG E+D QN QI+RI +KA SN+ R+D AN+RA ++L
Sbjct:   18 ADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKS---SDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
The following BLAST results are available for this feature:
BLAST of TCONS_00064502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNP251.814e-6455.56Synaptosomal-associated protein 25 OS=Homo sapiens... [more]
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