TCONS_00064456 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064456
Unique NameTCONS_00064456
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064456 ID=TCONS_00064456|Name=TCONS_00064456|organism=Clytia hemisphaerica|type=transcript|length=279bp
TGTCACTGATCATTACCAGAAACAAGAGGGGGCCCAGAACTGAGCCTTGT
GGAACTCCGCTTGTAACTTTCGCTTCATCTGATAGGAACGTGTTTATGGA
AACTTTTTGGTATCTCTCAGTAAGGAAGGATTGTATCCAGTTCAATAGTT
GTCCTTTGATTCCATTGATTTTTAGCTTGTGTAGCAAGATGTGATGGTCC
ACCTTGTCAAAGGCCTTGCTGAAGTCAAGGTTGATtatatcaacattttc
attgttttgtagGTGAGATATCAGTCTTT
Run BLAST on NCBI

transcript from alignment at scaffold_415:51..329

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064456 ID=TCONS_00064456|Name=TCONS_00064456|organism=Clytia hemisphaerica|type=transcript|length=279bp|location=Sequence derived from alignment at scaffold_415:51..329 (Clytia hemisphaerica)
AAAGACTGATATCTCACctacaaaacaatgaaaatgttgatataATCAAC
CTTGACTTCAGCAAGGCCTTTGACAAGGTGGACCATCACATCTTGCTACA
CAAGCTAAAAATCAATGGAATCAAAGGACAACTATTGAACTGGATACAAT
CCTTCCTTACTGAGAGATACCAAAAAGTTTCCATAAACACGTTCCTATCA
GATGAAGCGAAAGTTACAAGCGGAGTTCCACAAGGCTCAGTTCTGGGCCC
CCTCTTGTTTCTGGTAATGATCAGTGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040419XLOC_040419Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064456-exon-scaffold_415-1491911889:51..329TCONS_00064456-exon-scaffold_415-1491911889:51..329Clytia hemisphaericaexon
TCONS_00064456-exon-scaffold_415-1510915933:51..329TCONS_00064456-exon-scaffold_415-1510915933:51..329Clytia hemisphaericaexon
TCONS_00064456-exon-scaffold_415-1575043694:51..329TCONS_00064456-exon-scaffold_415-1575043694:51..329Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_415supercontigscaffold_415:51..329 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.00032	3.23766	3.48177	3.69331	3.47024	5.75485	4.89707	3.83104	8.29333	5.81453	5.4392	1.99086	0.613171	3.26661	1.68298	1.10962	3.15794	1.50865	6.96167	1.69708	2.02339	0	1.35466	0	1.51857	4.10492	3.66077	2.27575	2.33005
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064456 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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