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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064445 ID=TCONS_00064445|Name=TCONS_00064445|organism=Clytia hemisphaerica|type=transcript|length=835bp
GGCATTTTacaattacaaaaaataaagaGGTTGTAACCTTCGATTAGAGG
AACTTTACTGGAAAAATGACTGTATAGCTGGGAACCAGGAGActtcaaaa
tttaaagTGAAGCACCAAACAATGATCAATAGCAATCTTCTCGATGACAG
GATGATGGAAAGTGTAAATAGGGGTTCtttattttgattaatttatacCA
CGGCGATCTTCAGATTAATGTTCGAAAATCGGTAAAATCCTAAGTTGATT
TTTGTAATAAGTACCGTACTGCCGTTTCTTTAAaggacccgggggggggg
tcgaTTCAAAAACCACCTTATGTGTGGTCCAAAATAATACCTTTGAAATC
GGATCCTTaaagtgcagagaaaatttagccaattTCGATCCAATTTTGGC
GAGAAATCGatccttacggtgcattttcttgaacattttttatcatttta
aggcaaaatatggtcagttTTTCCAAATTCTACATCGTTAGAGTACACTT
TTTTCCAATCTTTGCTAATTTCAacacccttatagtgcactttGTTTAGT
TTGCGAAAAGGACCCGAAAGGGCCGCATGTACGGTAGGTCATTTACGTTG
AGTTCCTCCCCCCTCCCCACCTGGAAAAGGACCTCATTAAAGGATCGAAT
TCATTGGTTTAATGAAGTCCTTATGTTTAAAattgaaccaaagaaatttg
ttttaaaaaagacttttcaaAATTAGTTAATTTTGGACAttccaaaaata
aacattatttGAATTCAACAAATCCGACTCAAGTTCGTCGTGTACTTTta
tatttattaaaatttctttttgtaattgtatattt Run BLAST on NCBI transcript from alignment at scaffold_415:122204..123359- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064445 ID=TCONS_00064445|Name=TCONS_00064445|organism=Clytia hemisphaerica|type=transcript|length=1156bp|location=Sequence derived from alignment at scaffold_415:122204..123359- (Clytia hemisphaerica)
GGCATTTTACAATTACAAAAAATAAAGAGGTTGTAACCTTCGATTAGAGG
AACTTTACTGGAAAAATGACTGTATAGCTGGGAACCAGGAGACTTCAAAA
TTTAAAGGTTAGATTTAAAAGTTTTGAAAATTTGAACAAAATGAAGTTTT
GTAGCATGGAAAAAAAGTTTATTTTTTTCTTCTTCGTTTTTCATCTTGAT
TTTCTAAAAAAATTATTTACTCTTACTTATTAAAGCACTACCTAGTATTT
ATTGAAGTACTCTAAATCATCTTTCCAACGGTATATAATATGCTAATATT
GAATCATTCCTTGAGAAATAGCAAGCAAAACAAACATTAGTGCGCAATTA
ATGAATTTGCTTATTTGAAGCCATACATACATACATGTATAATTGCGACT
CTGCAATTCTATTTTTCCTACCTTATAGTGAAGCACCAAACAATGATCAA
TAGCAATCTTCTCGATGACAGGATGATGGAAAGTGTAAATAGGGGTTCTT
TATTTTGATTAATTTATACCACGGCGATCTTCAGATTAATGTTCGAAAAT
CGGTAAAATCCTAAGTTGATTTTTGTAATAAGTACCGTACTGCCGTTTCT
TTAAAGGACCCGGGGGGGGGGTCGATTCAAAAACCACCTTATGTGTGGTC
CAAAATAATACCTTTGAAATCGGATCCTTAAAGTGCAGAGAAAATTTAGC
CAATTTCGATCCAATTTTGGCGAGAAATCGATCCTTACGGTGCATTTTCT
TGAACATTTTTTATCATTTTAAGGCAAAATATGGTCAGTTTTTCCAAATT
CTACATCGTTAGAGTACACTTTTTTCCAATCTTTGCTAATTTCAACACCC
TTATAGTGCACTTTGTTTAGTTTGCGAAAAGGACCCGAAAGGGCCGCATG
TACGGTAGGTCATTTACGTTGAGTTCCTCCCCCCTCCCCACCTGGAAAAG
GACCTCATTAAAGGATCGAATTCATTGGTTTAATGAAGTCCTTATGTTTA
AAATTGAACCAAAGAAATTTGTTTTAAAAAAGACTTTTCAAAATTAGTTA
ATTTTGGACATTCCAAAAATAAACATTATTTGAATTCAACAAATCCGACT
CAAGTTCGTCGTGTACTTTTATATTTATTAAAATTTCTTTTTGTAATTGT
ATATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064445-exon-scaffold_415-1575043694:123253..123359 | TCONS_00064445-exon-scaffold_415-1575043694:123253..123359 | Clytia hemisphaerica | exon |
| TCONS_00064445-exon-scaffold_415-1575043694:122204..122931 | TCONS_00064445-exon-scaffold_415-1575043694:122204..122931 | Clytia hemisphaerica | exon |
| TCONS_00064445-exon-scaffold_415-1510915933:123253..123359 | TCONS_00064445-exon-scaffold_415-1510915933:123253..123359 | Clytia hemisphaerica | exon |
| TCONS_00064445-exon-scaffold_415-1510915933:122204..122931 | TCONS_00064445-exon-scaffold_415-1510915933:122204..122931 | Clytia hemisphaerica | exon |
| TCONS_00064445-exon-scaffold_415-1491911889:123253..123359 | TCONS_00064445-exon-scaffold_415-1491911889:123253..123359 | Clytia hemisphaerica | exon |
| TCONS_00064445-exon-scaffold_415-1491911889:122204..122931 | TCONS_00064445-exon-scaffold_415-1491911889:122204..122931 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_415 | supercontig | scaffold_415:122204..123359 - |
Blast
The following BLAST results are available for this feature:
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