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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064429 ID=TCONS_00064429|Name=TCONS_00064429|organism=Clytia hemisphaerica|type=transcript|length=528bp
TACCGAAAGACAAATATACCAACAGTAAATATGCAAGTATAACAACATTC
AAAGATTGTgtatacaaaagaaaaagagcCTTAAATACTGACTTGAAAAG
AGACACACCTGGTGCTGAACTGTTCGCTACGGTGAACGCACCAGTAAGTT
TAAGTTCACTCTCAATTAACAATCCTATTTACCGgTTAACAACACGGTCA
TTGGAGCATCATGTGACGGTATGGCATCTTCCATACAACTCAAGGTGACC
ACTGATCCACCACGATTCCAATGTCATTGTGTTGGTTATACTCTTGTTAA
AGGTCTTACGATGGAATGTTTGCTGCATTACTGGTTATGCCCCAAGTATT
GATGTAATGGGTCGAACACTGAATCTGAAACATTAAgacgttttgttttt
aacaAAGCATCATCGTTTTCGTTGCCAATCTAGAAAGACCAACCTCTTCG
GCCTTGAATGGAATAATGAAGAAAAGTTTCCAAGCTGTAgctaataaaaa
atatatgtttcATGGGCTtgcctttttt Run BLAST on NCBI transcript from alignment at scaffold_415:9244..10250+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064429 ID=TCONS_00064429|Name=TCONS_00064429|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at scaffold_415:9244..10250+ (Clytia hemisphaerica)
TACCGAAAGACAAATATACCAACAGTAAATATGCAAGTATAACAACATTC
AAAGATTGTgtatacaaaagaaaaagagcCTTAAATACTGACTTGAAAAG
AGACACACCTGGTGCTGAACTGTTCGCTACGGTGAACGCACCAGTAAGTT
TAAGTTCACTCTCAATTAACAATCCTATTTACCGGTAAAGCTACTCTATT
GGCTAATTTTCGGCAATTTGCCAATCCATACTTGGGTTGCTCGAGAAAGA
AATTTCAGCCCCTATGTTGAGGATGTCTTTTTGAAAGGTCAAACCCCTGT
AGAATCGTGTCGAAATTTTAGATACCACCCTAGACCTtggattttatttc
aaattttacagACGCGTGGATTTTTGTCTATTTATAACACTCTTTGGAGA
GGGCCAGATTATTCCTATTAAAAAATCGTTGCTATGCTTTTTCAACTCTA
ATGATAAGCATGCTATTCCAAACTTCATGTTTAACTTTATGTACCACCGC
AATGAGTTGAAGGATATTAGCGTAACTGTCCTTTTGGGTTGTTTTCCTCG
ATATATCTGTAGTTTGTTGTAAGAATGGGGTTGAAAACATTACAAGGATG
AATAACAAATCATGTGAAGAAAAAAGAAGCATAATCTTACAAAacttctt
tgaattttttcaggTTAACAACACGGTCATTGGAGCATCATGTGACGGTA
TGGCATCTTCCATACAACTCAAGGTGACCACTGATCCACCACGATTCCAA
TGTCATTGTGTTGGTTATACTCTTGTTAAAGGTCTTACGATGGAATGTTT
GCTGCATTACTGGTTATGCCCCAAGTATTGATGTAATGGGTCGAACACTG
AATCTGAAACATTAAgacgttttgtttttaacaAAGCATCATCGTTTTCG
TTGCCAATCTAGAAAGACCAACCTCTTCGGCCTTGAATGGAATAATGAAG
AAAAGTTTCCAAGCTGTAgctaataaaaaatatatgtttcATGGGCTtgc
ctttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064429-exon-scaffold_415-1491911889:9244..9427 | TCONS_00064429-exon-scaffold_415-1491911889:9244..9427 | Clytia hemisphaerica | exon |
| TCONS_00064429-exon-scaffold_415-1510915933:9244..9427 | TCONS_00064429-exon-scaffold_415-1510915933:9244..9427 | Clytia hemisphaerica | exon |
| TCONS_00064429-exon-scaffold_415-1575043694:9244..9427 | TCONS_00064429-exon-scaffold_415-1575043694:9244..9427 | Clytia hemisphaerica | exon |
| TCONS_00064429-exon-scaffold_415-1491911889:9907..10250 | TCONS_00064429-exon-scaffold_415-1491911889:9907..10250 | Clytia hemisphaerica | exon |
| TCONS_00064429-exon-scaffold_415-1510915933:9907..10250 | TCONS_00064429-exon-scaffold_415-1510915933:9907..10250 | Clytia hemisphaerica | exon |
| TCONS_00064429-exon-scaffold_415-1575043694:9907..10250 | TCONS_00064429-exon-scaffold_415-1575043694:9907..10250 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_415 | supercontig | scaffold_415:9244..10250 + |
Blast
The following BLAST results are available for this feature:
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