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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064422 ID=TCONS_00064422|Name=TCONS_00064422|organism=Clytia hemisphaerica|type=transcript|length=1541bp
GGAAATAGGCGGGAAAGTCAGTTATCGGCAAAATCGGGATTCCCCCCGAC
AacaagaaagtaaacaaaacatttttgtcaacaaaaccaaaaacCTGGAA
ACTTTTGGCTGTTGACGACTGACGACATTGATTGGTTTGTTGGGTTTGAC
TTGCTTTGACTAGAAGATTTGCTTTAAAATTATCAACACCATTAAAAGTA
CTCCTGTTTTCTATCCTGGTGTTTTTTCTATCTAACAAACTGGCAAATGT
CAAGGCAGAATATTCAAAATGGCTAGAGCAGCACTTTTTTGTTGATTATA
GAGAATTGCAATTGGTTGTGACTTGCCTGCTTGTATTACAGCTGTCAAAA
ACAGTTAAACAGAACAGATATATCTAGGAACTATGATGGTTCAGTTTTGT
ACCTCATTCTTCAAGTTTTGAAACTGAAGTACCTGTTCACTGATTGCTTT
GTTTGAGCGAAGAACTGGAAGATTTGATTTTCCCAAATTCACGATTCTTC
TGGAAATGGCATGGGAACAGTCACAGCTGGTAACGACTAGAAATATCAGC
TTACTCAAGTGGATGGAAGAAACAAGGGAACAACGGCTTGATGATCAAGT
ACGATATATTAATCACGTAATACGTGTGTGCAGGTGTGAGTGCGTGCTGT
ATATGCATAGCATAGCGTACATTCATCATATGCTTGATAAGTTTATATGT
TATGATATCTGGATATGATTATTATTGATGTTTGACGGACGGTAATTGAC
AGCTGGACGGACGACAACTGACAGCCTGATGGACCATGAAAGTGCATCAA
ATGGGATTTGTTTGCTTCAATATAAACTTGTTAAATGGATAATTCTTGGA
TCTTTTTCTTCTCTAAAATCTGTATATTACcgtctaacttgggacgattg
gtcaaaacatgggactgttgacaaTCTGGCCTggactccaccaagtttat
caatcttactttctgtcataacatgtcacgataactttcactgataacgc
gccctttttaacttttttgttttcattcaaaatgactggacgctgattgg
agaattagagaacaccCGTCACCTAACCGCTTAtcgcctgatgggattaa
cCAATAACAAGCGTGTAATATGCCGCCCgtgcaagtgacgtcaaacgctg
tcgttttgccactaatttgttcttcttcgttccagacactgGCATGTATT
CCACTGCggattttcttcatattttgatttgaagCCCACTTGGTGCGAaa
aagaaatcgtgtattttttgatacgccgttcattaactcaaatcaaatta
ttttggaggttcggtgaaatggtggccgaattgatgtcccatgttttgtc
agatagtcccaagttagagcagttgacggtataaatGATTGTGCTGTGCc
agaaaaaaatcttcattgGGCTTGGGTGATTTTTCAAGGGACCAGGGGTA
TTAAGTGATGGGTATGTCcaagccaaaaattgaaaattgaccctGTGAGA
GACAGAATTTTGCACATACCTGACACACCCAATTTACCTNN Run BLAST on NCBI transcript from alignment at scaffold_414:3507..5047 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064422 ID=TCONS_00064422|Name=TCONS_00064422|organism=Clytia hemisphaerica|type=transcript|length=1541bp|location=Sequence derived from alignment at scaffold_414:3507..5047 (Clytia hemisphaerica)
NNAGGTAAATTGGGTGTGTCAGGTATGTGCAAAATTCTGTCTCTCACagg
gtcaattttcaatttttggcttgGACATACCCATCACTTAATACCCCTGG
TCCCTTGAAAAATCACCCAAGCCcaatgaagatttttttctgGCACAGCA
CAATCatttataccgtcaactgctctaacttgggactatctgacaaaaca
tgggacatcaattcggccaccatttcaccgaacctccaaaataatttgat
ttgagttaatgaacggcgtatcaaaaaatacacgatttcttttTCGCACC
AAGTGGGcttcaaatcaaaatatgaagaaaatccGCAGTGGAATACATGC
cagtgtctggaacgaagaagaacaaattagtggcaaaacgacagcgtttg
acgtcacttgcacGGGCGGCATATTACACGCTTGTTATTGgttaatccca
tcaggcgaTAAGCGGTTAGGTGACGggtgttctctaattctccaatcagc
gtccagtcattttgaatgaaaacaaaaaagttaaaaagggcgcgttatca
gtgaaagttatcgtgacatgttatgacagaaagtaagattgataaacttg
gtggagtccAGGCCAGAttgtcaacagtcccatgttttgaccaatcgtcc
caagttagacgGTAATATACAGATTTTAGAGAAGAAAAAGATCCAAGAAT
TATCCATTTAACAAGTTTATATTGAAGCAAACAAATCCCATTTGATGCAC
TTTCATGGTCCATCAGGCTGTCAGTTGTCGTCCGTCCAGCTGTCAATTAC
CGTCCGTCAAACATCAATAATAATCATATCCAGATATCATAACATATAAA
CTTATCAAGCATATGATGAATGTACGCTATGCTATGCATATACAGCACGC
ACTCACACCTGCACACACGTATTACGTGATTAATATATCGTACTTGATCA
TCAAGCCGTTGTTCCCTTGTTTCTTCCATCCACTTGAGTAAGCTGATATT
TCTAGTCGTTACCAGCTGTGACTGTTCCCATGCCATTTCCAGAAGAATCG
TGAATTTGGGAAAATCAAATCTTCCAGTTCTTCGCTCAAACAAAGCAATC
AGTGAACAGGTACTTCAGTTTCAAAACTTGAAGAATGAGGTACAAAACTG
AACCATCATAGTTCCTAGATATATCTGTTCTGTTTAACTGTTTTTGACAG
CTGTAATACAAGCAGGCAAGTCACAACCAATTGCAATTCTCTATAATCAA
CAAAAAAGTGCTGCTCTAGCCATTTTGAATATTCTGCCTTGACATTTGCC
AGTTTGTTAGATAGAAAAAACACCAGGATAGAAAACAGGAGTACTTTTAA
TGGTGTTGATAATTTTAAAGCAAATCTTCTAGTCAAAGCAAGTCAAACCC
AACAAACCAATCAATGTCGTCAGTCGTCAACAGCCAAAAGTTTCCAGgtt
tttggttttgttgacaaaaatgttttgtttactttcttgtTGTCGGGGGG
AATCCCGATTTTGCCGATAACTGACTTTCCCGCCTATTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064422-exon-scaffold_414-1491911889:3507..5047 | TCONS_00064422-exon-scaffold_414-1491911889:3507..5047 | Clytia hemisphaerica | exon |
| TCONS_00064422-exon-scaffold_414-1510915933:3507..5047 | TCONS_00064422-exon-scaffold_414-1510915933:3507..5047 | Clytia hemisphaerica | exon |
| TCONS_00064422-exon-scaffold_414-1575043694:3507..5047 | TCONS_00064422-exon-scaffold_414-1575043694:3507..5047 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_414 | supercontig | scaffold_414:3507..5047 . |
Blast
The following BLAST results are available for this feature:
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