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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064315 ID=TCONS_00064315|Name=TCONS_00064315|organism=Clytia hemisphaerica|type=transcript|length=2495bp
AATGTACACACCAAAAATTCAAGACTGCAGAACTGGAACGGAGGAACTGG
AAGGAAAAAGGACTAGGCGGTAAAATGATGTTCATAATTGTTACTTGTCG
GAGTCTACTTTGGTTTTTATCAACGATTGGTACTTTTATGGCTGTTTTAA
GTGCAACATTCTACCCACGATGGCTGATAAGTGAAAACAAAacatattat
aataaaaaactaaataaaacttATGAATACAATGATAGGATTGGAATTTA
CAACAAGTGTCAATTTTCTAGAAGATTGAAGAAAGTATTTTGTCGACCTT
ATGCCAGCGAACTTACAGAGGTTACTTCAATAGCTTGGCAATGTGCATTG
TTTTTCTTGGGTGTTTCATTACTATTACTTGGAATCGCTTGTATATTTGC
TATAATTAGTTTCTGTAAACAGATCATTAAACGAAAATCATTAATGAATT
TGGCTGGCATACTACAAACTTTTGCAGGTTTGTTTATGATTGTTGTCTGC
ATTCTTTATCCTTTGGGTTGGGACAATGACAATATCAAGGATATATGCCA
TAATGAAAATCAAAAGGCCAGCAAATTCAATATGGGAAATTGCTCTATGG
GCTTGTCATTTTTTTGTGCTATTGGAGGTATGGCTGGATGCTTCTTTTGT
GCTATGTTTTCCTTTGTTGCTGACAAGGCAGTCTTCTCAGCAAAAGTTCA
AGATGAAATTTTAGAAGGCAAACGGTTGATATGTGTCTTTTAGATATTTA
TATCTATCATGAAATTCCAGGTGCATGTCACCATTTTGACACTTTCTAGT
CCAACAGTctaatagtccgaatctataaaataaatttaccatttagaagt
ctttttttccgacgtcacttttgtacgaaaacgaaagattttagatcgtc
gaatgttgaataagggcaTTTGTGCATGTAAGGGTTGCTATGTTGCATGT
AAGGGTTGCATGCTATAAGGGTTGTAAATCACAAACTTTAATTCCCCCCC
AAAAAAAGAAGGGttgtaaaaacagctaaatccaatttcttgacttttga
aagcctaatcctaataagcttcccaaaatttaagagaAGTCTGGTTTAGG
GGCCCAACATCAAagtcggaactttggatttttataagcacgtggttgtt
tataaaagatgtgcctcctcttcTGCAATTTtcgttttatatgttttttt
gactcgttgtcggacaagaTTGTTGTCGGAATAGTGACGCAtacgtcaaa
tccaacgtcgggcATTTTTAGTGTCTGACTAGAAaatgtcggactactga
cgacctcccgaAATTCCACGAGTACATGTTATCATCTTGAAGCTTGATTA
TTTCTTAGAAAGGTGAATTTCCAATTGAAAAAGTTGTTATTGATAGAAAA
TGAGCAATAGGGGATATCGACTTCATATTAAAACTCATATTTGACCCCCA
AAAATTGTCCACAATGCTTTGGGCGGAAAAAAGTTTGCGGTGAAAATCTG
AGTTTTTATATGAAGCCGATATTGTCTATTGTAAAGAATTAgcactttga
ttttttatttcttgaaGCTAATCTAATTAAAAAACTTGACGAAGCAGGAT
GAAATTTCATCGTGTTTTTGGCTTACAGTAttcatatttctaaattttac
caTGAAGCATTTTATTTAGAAATAATTACCTAATATCATTATTACTGAAT
TATACATAGATTCCTTAGATTGATAGTGTATGTATATATCTACAAATGta
gaattttatttgctttttaattttctttctcataattttGGAAGAACCTT
GTATCTATAGTTTACTATCAGTTTTTTATCACTCCTTTTATTAAATCATT
TCATTGTagttagtttttatttttttcataagctcGGCTCTAGCTAACGT
CCACTCAATTATTCTGTTGTCCCAAATTGTCAAGGTCTATGCATTGCTGA
AATCATTAGCAAACGTACTATGAGACCTGTTAAATTTGTTAGAATATTTT
TATATCACAGTACTCTTTAAAGATAAGAATTTAGTTTtcctttaatttac
ttttatcaCTGACAATAAACAATCTTTTGCGATTTATTTGTTTTAGCATC
ATGCTGTTTGACTAAATTGCTCTATAAGTATTTATCACCCATTGTGACCA
TGCTTTAGTTCTCTAGAATATTTGACTGTTTATAATTTTGAGACCAGCTT
TGTATCAGTGAGcaaatcgaaaatgaaatcTTATTTAAAATTCTTTTGTC
TAAAATTGTATAGTATTATACAGTGTATCTATATCTTTATTTGCATCTAC
AGAGTATTATgaataaatttttgtaaataagtaGCCTTTTTTTATGTACA
ctgtctttttaattttatgcacttttttttgtttgtaattATTTGCATCA
AgcttttttgctcttttttaaaATTGTCTACTTATTTATCTATGTCATTg
cattttaagctaaaaatttCTCACCTTTCAAAACGCACCCAGCAA Run BLAST on NCBI protein sequence of TCONS_00064315-protein >TCONS_00064315-protein ID=TCONS_00064315-protein|Name=TCONS_00064315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
CTHQKFKTAELERRNWKEKGLGGKMMFIIVTCRSLLWFLSTIGTFMAVLS
ATFYPRWLISENKTYYNKKLNKTYEYNDRIGIYNKCQFSRRLKKVFCRPY
ASELTEVTSIAWQCALFFLGVSLLLLGIACIFAIISFCKQIIKRKSLMNL
AGILQTFAGLFMIVVCILYPLGWDNDNIKDICHNENQKASKFNMGNCSMG
LSFFCAIGGMAGCFFCAMFSFVADKAVFSAKVQDEILEGKRLICVF Run BLAST on NCBI transcript from alignment at scaffold_410:213699..227509- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064315 ID=TCONS_00064315|Name=TCONS_00064315|organism=Clytia hemisphaerica|type=transcript|length=13811bp|location=Sequence derived from alignment at scaffold_410:213699..227509- (Clytia hemisphaerica)
AATGTACACACCAAAAATTCAAGACTGCAGAACTGGAACGGAGGAACTGG
AAGGAAAAAGGGTATAAAACTTTGTAGNTCCTTTCTTATAAATATAGTAA
CATTTAACCAGACTCATTGCCCTCATTATATTCGAATTTATATTTTTTTT
AGGACTGATAATATCCGGGAGCCAAATCCTATATCTCCTTAAATAAGCAC
TTTTGCTTAACCCAAGATTCTACAGGATAAACTGTATATTTTTGGAATCC
TCAACTATCCTAGTTTAAGAAATGGTCGGTCCCCAAAGCTAAATCCTGGT
CAATTTTTCATACTGGGCCCGAGTTTAGGGGGTACTTTTTACCCTTTGTA
AGGATTTGTTAAGGAAAATAGCATTCCAGGGGTGATATAATTTGCTGTAT
CTAGTCAATCAGTTGACCAATTGCTTTGAAACTTTGCAAAAAGTTTCAAG
GTAGGCTGATGATTATTTTCGGCAAAAAATATTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCTGTACTGGTTTTTAAGTAGAAT
AGTTATTTGGAGCCTAATAATTTGTAAAATATTGTTAACTTGGGTAGAAA
TAAAAGTGATGTGTCATTGTTAAGGGCTGTTTTGATGAAAAATTTCTAAT
CGTTTTGTGAAATCAAAACTAACGGTCCTCTGCATACTCATAATGTACTA
CATACTCATAATTTGACTGATAATTTTTGCCGTTTTACTGACCTTTTATT
AGTAGCTAGTCTCAAAATAATAATTCTACAAGTAGCTGGGACCATTTTGG
GAAGCTCTGAATAGCAATATAGTGGAATCTCAAAGCAAAAACTGACAAAA
TTACGTCAAAAAAATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAAACTAGGATAGTTGAGGAT
TCCAAAAATGTATAGTTTATCCTGTAGAATCTTGGGTTAAGCAAAATGCC
ATTTTTTGGGTTTGGCTCCCGGACTATTGATATCTTTATTCTATTTTTAT
GTTTTGTCATATCTCGATGTGTTTGATGTCTTTCTTATACTTGGCTTACC
TTCTGCTTTAATTTGTTACATTGTTATTCAAAACATGGAGTTTGGGTCTG
AAAGTTGGAAGAAGTTAGGGAGGTCGAACTCCCGCCCTGGGGGGTACTTT
TAGGCAAATGGAGGGTATGGTATGTGCCGCCCTTAAGGGTACCTTTTTTG
GACTTCCAAAGTCCCGCTAAGGGTCGGTAAAATCAGAAAATCAAATTTCA
GTCCCAGTAAGGGTCGGAAAAATAGGAAATTTCAACTTTTTACCCCCTGA
AAGATCGAAATAGACCTTTTTTTAAAGATAGCAACTCCAGAAGATTTTTC
AAGTTTTAATTTTTTTTGCAAAATCTATCCTATCTTGTAGAGCTTTGAAA
AAGAAAGAAAATGAGGGGTCATAGGTCTCCAGAGGATTAGTGGTTGTAAA
GATATTCAAATTTTAGTGTCAAAAAATTGACTAAAAATGTCAAAAAAAAG
GTTAGGAAAATAGCTTGAAAAAATTCGAAAAATGTGTCAAAAAAGAAAAA
AAAGAAATTTTCCAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAAAAACTTATGAGTAAAGAATAAGTTTTTCTG
AAAGGAGAAACCCCAAATGAAAAGAAAATCTATTTCGGCAGAAATAAAAA
CTTTTTTTTGGGACATGCCCATGTTAAAGAAGCAAAAAAGTTAAAAAAAA
CTACATGAAAATGAAAGAAATAGAATTAGCGATTGTGATTTTTGAATTCC
TCACCCTTTTTCTGATAAACATACAAAGTTTCAGCCTCCAAATACATTTT
CTTCCGTTTCCAGACACATTTGTTTTTCGATAGTTGCAAATTTTTTTTCT
CCCGTCGGCAAACAATTTTCAAAATGTTGCAAAACGTTCGGCATTTTACC
AATTTGCCGTCTAGCCTGTGTCCACAGTGTTATATACCGCTGGAAAGCTA
AGATCACTGGCTTTCATTTAGTAAAAACCGGAACACTTTAGCATACATAG
AAAAAAAGTTCCAATGGTTCAAAGTTCACAGAAAAATGAAACATTCGGTT
TGACGTCAACGAAAGTTGCATGACTTCTGGAGTCGCTATTAAAGAGGCAG
CCATGTTGAATAATTATGTACTCCAGCATAATTTTTAAAATATGCATGAT
ACAGTATAATTATGCATGGCTGTATCATTGTTTTTATGCTGGAGTACATA
ATTGACCCCCCGTCAGCTCGCAACCCTAGTGTACCCCCCCCCCGGGTCGA
ACTCGTGCGTATTTTCGGCGCAAAAAAAAAGAAAAAAAGGAAAAAAAAGT
CTTCAAGTGACTTTATTGACCCATAACTTACCCAATACTTTGAGTTTTGC
ATCCAAACTCTTTTCCAAATGGTAGAGAATTTATCAGAGATGAGAATAAA
AAAAATCACTTTGATATCTTTTTTCTATCGGAAGTTACATTCATTTTCCC
ATCATATGTGTCGCCATCTTGAAAAAGAAAATGTTACGGCACCAAAAATT
TTTTTGATTGAGATGTAAACAAATGGTCGTCGCTATTGAAGCAAATCTAT
TTTTCTTATATCTTTTGAAGTACTTTATCATTTCTCAAAGGTGACCCCTA
ATTTTTTTTCTTATGCTTAGGGCTCAGATGAGCCTACTTTTGTTTCTTCT
GATTAAGTTTGAAAATTTAACTGACTCCCCTAGTTATATCAGGCTAGCTC
TAACTAAAGCTCCAAAACAGCATCTAACAGTTACATCAATATGCCAAAAA
CATTTTGTTCAACCACCTTCACTTCAAGATAGGCCACCACCAGTTTTCAG
AGCATGTCATGGTTGCCCCCAAGGAAAATTTCCAACATAAAACTCTGCCC
CTAAAGATCCGAAAAACAGGTTACTATAGCCAGTTCTCAATGATTTTGTC
CCTGAACTGTAGATATTATCAAAATTTTGCCCCTGCCCTTGAAAAGTGAG
CAATCTCTGCCCTCAAGATCTCGATGATTTCTGCCATACTCTGAAAACTG
GGGCCACCATAGAATGAACTTCCTTTTATAGGATGAACCATATTCAATTG
GCTTTCAGCCTTGCACTCCATCACAGAGCCTATTTGAGATATATTTTACT
AACTAGCCCAGAGAAAAACTTTAAACCTTTATTATTTGAATGCATGCCTT
TTTAATACTCAAATATAAAAAAATTAAAAAATTTTAACATTAGTCAAAAA
AGCCATTAAAATTGATTAGCCTCTGCGATGGAGTGCAAGGCTGAAAGCCA
CATGAATGGTTCATCCTATAAAAGGAAGTTCATTCTATGGTGGCCTATCT
TGAATTGAAGGTGCTTGAACAAATTGTTTTTGGCATATTGATGTAACTGT
CTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAACTAT
AAAGTGCACTTACAAACATCAATATGTTAGATCTAACAAAATTAATAACC
GCACTGTCATCATTGACAATAAAACAAACGATTTTCTGTCAAGAGCCTTG
AAACATTCTAACAACTTCCATCAAAATGATCTACCGTAGAATCGTCTAAT
ATCGACACCCCTCCTTTAAAGTCGAAACCGGATCTGTAAAATAATCAAAA
CAAACCCTGAATGAAATTCTTGGTATCATTCTTATCAAAAAAGTTCATCC
ATCAAACTAGAAGTTCAGTAAACATTGCAATTCTTTCAATTAAAAGAGCA
GCCAAATTATATAAGCAATTTCACATAACATATGAAACATGAAACACATG
CAAACTTAATAATCGTTCTCGTGCCCATCAATGAAATTTTACAACTTTAT
TACGCGTGATAAAACTAATTTGCGCGCTTAGTCGGCCTGGTTTCCCCTTC
CTTTTTTATCTCAAATACACGCTCTAGGCACTAAGAGGCCGCACACTGTA
ATGGCCAGTATGGCGGTCACATTAAATTCAAAAGAAACCGGGCTCTTTTT
ATTATTTTTGGTTCACGGTAAAAAGATCTACTAAAAAATTCCTCGCGTGC
AAAATGTTGTTTCGATATCTTCGTTGAAAGCATGCTAATTAGTTTTTTAG
TGATGACTACACCGTTAATGTTTTCTTTTCATACATAAGTAATGAATAGC
ACTTAACATTTCTCATATTACATCAACAATCTGTGACGTGATAGTGAGAG
TACAATTTAGTGATTGATTGGTAACTTTGGTATGTATTTGTTTATGTCTG
ATTTTTTATTTCCAAGACCAGCCTACAGCTATGTCGAAATAACAAGACGC
ATGTCGATATTGGACGATTCTACGGTATCACAGCTCAGTCCACCAATTTT
AGCGCAGTCCGAGGATTGAGCCGAGAACGCTCTGCGAGCTCCTGCATGGG
TGAAAAACTGCAATCTGTCAATCATTTTCTCAAGCGAAGAGTACGCGAAG
TGATTGTATGCCACGGATCATCAATGGATAGTATTCAATTATCATTATCC
CTTTATTAATTTCGCCTTAGCAAAAGTATTACGATAGGCATTCAGCGGTG
GTGTCATCGGACGAAAATTTAGAAAACGAAAGAACTCGATACGGTGGATG
AACTTACTAAACTTAATTTACACTTTACACGTTCGTATAACCACGGACGA
TTTTCGCAGGTTTTCTTTGGATTATGTCATATATCTTTGTGTCTTTAGCT
TCACAGTTTGGATTTTTTCTTCATTTTCTTATAAGCATATACTTTATAAG
AATCAAATCAACAACTCTTGATAGACGGTGATATACCCTTCGGTAATTAG
TTTTTACAAAGTAAATAAGGGATGGCGCACAATATGATCATATTTATTTT
TCTTATAAGTATATACTTTATAAGAATCAAATCAATAACTCTCGATAGAA
GGTGATATAGCCTTCTGTAATCATTTCTTACAAAGTAATCAAGGGATGGC
GCGCAATATGAACATATTTACATTATCGGGGAAAACTTCGTCGGGGAAAA
ATATTCGTCACTTGCTGGTAGTTGGTAAACGCATTAAGGCCGGGGTAACT
TTTCGTCGGGGAAAAATATTCGTCACTTGGCCAAAATTTTGTCACTTTTC
CCCGACCAAGTTTTCCCTGATTAGGTTTTTTTTTTCTATAAGAATCAAAT
TAATAACTCTTTATAGATGGTGTTATACCCTTCAGTTATTAGTTCTTAAG
AATTAAACAAATATTGTTCGTAAATTGATCTTATCTTTTTAGCGATTTTG
AGCCTCGTTGTTCATATAAAATTGTTTCATCAAGGCTCGATGTAAAGTAG
ACTCCAGATTAGTTTTCATCTCTACTTCCTGTTTTTTCCCATGCAGTTTA
AACTTTAGGCGAAATTTTCGACTTCAAGTCGTCTGTTTTCATTCCTAGAA
CTTTTGCAAAAAAAAGGAAAAATAGAAAAGTTGTATTTTTTACTGCTCTA
TTCACATACTGAATTTGAAAGATCTTCTATGTCGCGTTTTTTTGCAAACT
TCAAAAAACTGATTTTTGTCCTGCCTTTGCAGGACTTTGGCTTAAGCCAG
ACCTGATCAATGGAACTTATCGAACCAATCGAACTAATCGAACTCCATCG
AATGATTAAAGTTCGATTGAAAAAATTAATTGAACTCTTAGATTTTTTAA
AAGATTGTGAGTGTTCGATTAAGTTCAATCAATGGGTTTCGGTTTGAAGC
TTGTTGATGTTTTTCTAAATCCCCTATTTTGATTGAACCAATGAAAAATG
AAACTTTTCCATGCATGTTTCACTTTTATGCACCAATTCTTCAAACTGAA
AATATTTTAAGATTTAAAATTCTTCACATTTTATTCAATGATTTTTTTAC
TGTACAACACTCTGTTGACAGTCTAACTCTCGCATCAAATTCCCGCTTTC
TTCAGCACAAGTAAATTGAAGATGAGAAGAAACCTAGCACTGAGAGGAAT
CAGGTGCCAAAAAGAAGGGCCATGTGAAATGCAGCAATGTCATTGGTGGA
AATTTGATAAACAGGTGCTAAGGAGCGCTGGGAAGCAATCAGTCAGTCTA
AGCTTAAACTGCTATATCAGGATTATAAACTAGGCTAGTCTCACCTCTTT
TATCCTTCCCTTTACAACAATACAATGCTGACAAGTTGACACAACATTAG
AGCGACCCTAAAAGAAAAAAAGTTTCTGGTCCATTGGCCGGGTATATTTT
TTTTTCTCGTCGTCACCCGGCCACATTTTTTTTTCATAAGAACCAAATAG
ATAACAGATGAAACTTTCTTCCTAAAAACCTTTACTCATGACTCATTCAA
ACTATTACATCGTTTCTATATAACACTCTTAAAAAAGTTTGTGTATTTAG
CATGCTTTCTGGACGTTAAAGATCAAATAAATTGTGTTATGCATATTAAA
TCAATTTATTAGAATGAAAAGTTAGTTGATTCTTAGAAAAAAAATCACAA
AGTACAGCTTTTTGTAATTAACACATTTCTTTCAGTGAAAGAGAGAAAAA
ATATAAAGACAGAATGTGGGGCAACACTAACAGCCAGAGAGATGATTTTT
TTCTTCCTAATTTTTTTTGTTAGAAATCATAAAAAGGACCAGAAAAACAT
TTTTCCCGGCCGCCCGCATGACTTTTTTTTTCGTCACCTGTTGGACCGGA
AATGAAACATTTTTTAGGGTCGGCCTTGTCGGACGTGTATATGTACATTG
ACAAGTAAATCCCTGACTGAGAGAAGTTTATATTGAAATCTGCAACAAAA
ACGAAAGTGGTCTCTTCTACTAATGCTTCCCAGCACTCCTTCTCAGCTGC
TTATCAAATTTCCACCAATGAGGTTGCCCTATTTCAAACAAACCTTCTTT
TTGGCACCCGTGGCCTCTCAGTGCCTTGTACGACGCATATATTTCCAGAT
ATTTCATATATTTGTTTCAATCTGTGACCCGTGGCTTAGGTTTTTTCTCA
TCTTTAATTTATATATTGAAGAAAGCAGAAATTCGATGCAAGAGTTAGAT
TGTCAACAAAGTGCCATAAAAAATCATTGAATAAACAAAGAACTTAAAAT
CTTAAATATTTTTATTTTGAAGAATAGGTGCAAAAAAGTGAAACATAGAA
AAGTTTCATTTTTCATTGCATTAATCCAAATGGGGGATTTGGAAAATTTT
CTATGTTTAGTTTTTATGCACAAACCCCTGTAACTATGGTCAAGAACCTC
GTTGCTAAGATATTGGCTTGAAATCGAAAGTGAAACCACTCAAAACGAAA
GTAAAATCGGCCCGTACTCTAAATCCAGTAATTTTGATATATGAGTTTAA
AAGTCTATACTGTCAGTAGAAGAGACAGCTAAAATTGAAACCTTTTTTTA
AATTTCCTACCAAAAAAGATTTTTTAAGCTTGAGGGTAAGTTCAATCTAT
ATGCGCTTGAAAATATGTCAAAAATTATTAATTTTTCATATTATTAGGTT
ACCGTTACCTATAGGTACCAGTGCATTGGTGATTGGAAGTGTCACCGAAA
AATGTCCTGTCCAAAATAATATTGAAATTGGTGATATTTTTGAAATTCTG
CGGGGCAGAAAGATTACAATGGCTAAATATTTTTATCTAGGATGGAGCAT
ATTTTAATTTAGAAGATTAAAGATTCAAAGCCCATTAGATTATGATTTCA
GGGGTGCTTTAGATTTAAGAACGGGTCATATTCTAGAAAGTTAAAGCAGC
ATCTGTTGATGACTAAAAGGGTCACTTTTTTCAGAGTTTATTTAACTAAT
ATGGCCGTTTTTACCAACATTTTAGTGTTTTCAGGAGGGGCAGCATCCTG
TTTCCGGACGCAAAAAGGGCATGAAAAAAGGTCTGGCAAAGTTCAAAAGG
TTTTGAAGTCTTACTGTCTCAACCAGCGATGACCAGGCGCAATGTTTTTA
CTTTTAAATGGTTCCTAACAGGTCCGCATTTCAACCCGTATGAAAGTTTT
TACCATAATGCCTTGAGTTTTTCCGTAAAAATACGTTTGTAAATTTAGTT
GCAAATCCGTGAAAATTTACGAACATGGGTTTTTGAGCTTTGAATTCAGT
TCGAAGATCAAAGGTTTTGTTTAATTAGTTGGGAACTATTAAAACACAAA
GATAGAATTAACCACAAATTAGCCACCGTTATCCGGTTCCCGGTAGCAGA
AAAAAGGCCTGCCTGGAATTTTGCCTGCTTAACCCATGCTGCCATGCATG
GGAAATTAAACGGAAGTCTTTAAAGTGTTGAAATTCAATAAAAACCACTT
TAGAATGCAATTCTGAGTAATTCTTAACTTGGGTTAAATGAAAACAATAT
TTCGTAAATTTTGAAATTATAGTTAGATTATGACCGCAATAATTTACGAT
AATTTTTTTCACTTGGGGCTTACGCTACCGATTTGTAAGCTTAACGTGGT
TTGAGGCAATGACATTAAGTCATGAACAAAAAAAGAAGCGACCGCCATTT
TGAATTCAAAGCACTTCGACTGAAAGTGGCATGAGATGGCATGCGATGTT
GTTATTGTGTTTTTGTGAATGTGTGTTGGAACTTGATGTATAATTTTATT
ATAAACGTAAGTGAATTGCTTTTTAGCCATTTATGTAATGCTGAAAGGTT
GTTAGTAACAGAGGATAATAATTTGTTTGAGAAAAATGGTTTGAAGTGTG
TAAACCAGCTTCGTTAACTTTAGCAACATTTTTTAAGTTCGTAAATTTTA
CCTGCACCTACTATAACATAGTTTTAGTCTTGTATGTGTGGGATTTCTAG
CTCTAGTAATTTAAAATGCATTTCGTGTTAAAGTGACTGCAAATCTGTAT
TCTGATTCTCCAAAACTAAAAAGACTTCTCAGTTGGCCTCTATTATTAAT
GACTGAAATGATTGAGTTGCGACTGGGATTATGATGGATTTCAGGTTATA
GGGAAACGACAAATGAAAAGCAAAAGTGGCCATCGATGTGTCCCCTTTTT
AAATCAAGACTTCTATCTAAACTCCCACCTCTTTTCAGAAAGTACAGAAA
AAATACAACAGAAAATGAATTGCTAAAAAATTGCCTAGATAGGATATTGT
AGGATTATTCCAAAGAAAATTAATAATAATTTAAATTTTTTCATCTGGGT
TTCATACACTGAGGTCTGAGTTCGATTCCCACTGTAGCACTACAGTTCAC
TTGGTATGCCAGACATTTTGGTGTTTGGTGTCACTCATCCCGTTCTGCAC
CTACAACATGCTGTAAGTTGTCTTGCCTGCACAGGACCAGCCGTTTCTGG
ACAGCATTCCAACTTGAAAAAAAAGAGGCATTCCTACAGATTGTGTATGG
CAGGGCCTGAAATAACGATCGGACATCAGACATTGTCCGACTCAATTGCT
GGAATGTCCAACCAAATAGATTCTGATTGGACATTATGTCCAACCCATAT
TTTCAGTCCCTTTAAAAATTCAAACAAATTAAAAGATTATTTAAGTAAAT
TTGAAATTAGCAACCTTTTTATTTAAACAGGGAAACTCTCTGCAGTTAAA
AATGTCCTCTATTCATTGTGTGTGAAAGTAGACAATTCATCCTTTTTCAA
GCTTGTTTCAAGTCAAAATCATAGCGCAAAAAATGCCGTCCACTAAAGTC
TTTCAAAATTTCTAGCTGGTCTAATTTTTTGCCCAACCAAAAAAACGATC
ACGTTGGATTATCCGCCCAATTATTAGCTAAAAATTCATTCGGACATATC
TGACCCGAATCGATTTGCTTCGGACATCATGCTGACCATCAAAATACTGT
TATTTCAGGCCCTGTATGGGATTACTACCAAGCCTGTTTGTAACTCACCA
ACTTTCTCATTTTTTTTATTTAATTGATATCTTAACTTGCTGAACTGATT
TTTTGTTTAGACTAGGCGGTAAAATGATGTTCATAATTGTTACTTGTCGG
AGTCTACTTTGGTTTTTATCAACGATTGGTACTTTTATGGCTGTTTTAAG
TGCAACATTCTACCCACGATGGCTGATAAGTGAAAACAAAACATATTATA
ATAAAAAACTAAATAAAACTTATGAATACAATGATAGGATTGGAATTTAC
AACAAGTGTCAATTTTCTAGAAGATTGAAGAAAGTATTTTGTCGACCTTA
TGCCAGCGAACTTACAGAGGTTACTTCAATAGCTTGGCAATGTGCATTGT
TTTTCTTGGGTGTTTCATTACTATTACTTGGAATCGCTTGTATATTTGCT
ATAATTAGTTTCTGTAAACAGATCATTAAACGAAAATCATTAATGAATTT
GGCTGGCATACTACAAACTTTTGCAGGTAGGTTTCTTTCATTTGTTTGTT
TGTTCTGATTATTTTTTTGAAATCAAAAGTCTTTTCTGCCTCATAGGGAT
TCAAGTACTGCAAATCTAAAATTTGATGGGTCGAACATTTAAGAACAGTG
TAAAAGGTTTTTCAAAATAGCCTCTATAGCCTTTTCTCAACAAACTACAT
CACCTAAACGATAATCTTATCATTGGTTATCTTATATTTTCAGGTTTGTT
TATGATTGTTGTCTGCATTCTTTATCCTTTGGGTTGGGACAATGACAATA
TCAAGGATATATGCCATAATGAAAATCAAAAGGCCAGCAAATTCAATATG
GGAAATTGCTCTATGGGCTTGTCATTTTTTTGTGCTATTGGAGGTATGGC
TGGATGCTTCTTTTGTGCTATGTTTTCCTTTGTTGCTGACAAGGCAGTCT
TCTCAGCAAAAGTTCAAGATGAAATTTTAGAAGGCAAACGGTTGATATGT
GTCTTTTAGATATTTATATCTATCATGAAATTCCAGGTGCATGTCACCAT
TTTGACACTTTCTAGTCCAACAGTCTAATAGTCCGAATCTATAAAATAAA
TTTACCATTTAGAAGTCTTTTTTTCCGACGTCACTTTTGTACGAAAACGA
AAGATTTTAGATCGTCGAATGTTGAATAAGGGCATTTGTGCATGTAAGGG
TTGCTATGTTGCATGTAAGGGTTGCATGCTATAAGGGTTGTAAATCACAA
ACTTTAATTCCCCCCCAAAAAAAGAAGGGTTGTAAAAACAGCTAAATCCA
ATTTCTTGACTTTTGAAAGCCTAATCCTAATAAGCTTCCCAAAATTTAAG
AGAAGTCTGGTTTAGGGGCCCAACATCAAAGTCGGAACTTTGGATTTTTA
TAAGCACGTGGTTGTTTATAAAAGATGTGCCTCCTCTTCTGCAATTTTCG
TTTTATATGTTTTTTTGACTCGTTGTCGGACAAGATTGTTGTCGGAATAG
TGACGCATACGTCAAATCCAACGTCGGGCATTTTTAGTGTCTGACTAGAA
AATGTCGGACTACTGACGACCTCCCGAAATTCCACGAGTACATGTTATCA
TCTTGAAGCTTGATTATTTCTTAGAAAGGTGAATTTCCAATTGAAAAAGT
TGTTATTGATAGAAAATGAGCAATAGGGGATATCGACTTCATATTAAAAC
TCATATTTGACCCCCAAAAATTGTCCACAATGCTTTGGGCGGAAAAAAGT
TTGCGGTGAAAATCTGAGTTTTTATATGAAGCCGATATTGTCTATTGTAA
AGAATTAGCACTTTGATTTTTTATTTCTTGAAGCTAATCTAATTAAAAAA
CTTGACGAAGCAGGATGAAATTTCATCGTGTTTTTGGCTTACAGTATTCA
TATTTCTAAATTTTACCATGAAGCATTTTATTTAGAAATAATTACCTAAT
ATCATTATTACTGAATTATACATAGATTCCTTAGATTGATAGTGTATGTA
TATATCTACAAATGTAGAATTTTATTTGCTTTTTAATTTTCTTTCTCATA
ATTTTGGAAGAACCTTGTATCTATAGTTTACTATCAGTTTTTTATCACTC
CTTTTATTAAATCATTTCATTGTAGTTAGTTTTTATTTTTTTCATAAGCT
CGGCTCTAGCTAACGTCCACTCAATTATTCTGTTGTCCCAAATTGTCAAG
GTCTATGCATTGCTGAAATCATTAGCAAACGTACTATGAGACCTGTTAAA
TTTGTTAGAATATTTTTATATCACAGTACTCTTTAAAGATAAGAATTTAG
TTTTCCTTTAATTTACTTTTATCACTGACAATAAACAATCTTTTGCGATT
TATTTGTTTTAGCATCATGCTGTTTGACTAAATTGCTCTATAAGTATTTA
TCACCCATTGTGACCATGCTTTAGTTCTCTAGAATATTTGACTGTTTATA
ATTTTGAGACCAGCTTTGTATCAGTGAGCAAATCGAAAATGAAATCTTAT
TTAAAATTCTTTTGTCTAAAATTGTATAGTATTATACAGTGTATCTATAT
CTTTATTTGCATCTACAGAGTATTATGAATAAATTTTTGTAAATAAGTAG
CCTTTTTTTATGTACACTGTCTTTTTAATTTTATGCACTTTTTTTTGTTT
GTAATTATTTGCATCAAGCTTTTTTGCTCTTTTTTAAAATTGTCTACTTA
TTTATCTATGTCATTGCATTTTAAGCTAAAAATTTCTCACCTTTCAAAAC
GCACCCAGCAA Coding sequence (CDS) from alignment at scaffold_410:213699..227509- >TCONS_00064315 ID=TCONS_00064315|Name=TCONS_00064315|organism=Clytia hemisphaerica|type=CDS|length=2223bp|location=Sequence derived from alignment at scaffold_410:213699..227509- (Clytia hemisphaerica)
GTTTGTTTATGATTGTTGTCTGCATTCTTTATCCTTTGGGTTGGGACAAT
GACAATATCAAGGATATATGCCATAATGAAAATCAAAAGGCCAGCAAATT
CAATATGGGAAATTGCTCTATGGGCTTGTCATTTTTTTGTGCTATTGGAG
GTATGGCTGGATGCTTCTTTTGTGCTATGTTTTCCTTTGTTGCTGACAAG
GCAGTCTTCTCAGCAAAAGTTCAAGATGAAATTTTAGAAGGCAAACGGTT
GATATGTGTCTTTTAGACTAGGCGGTAAAATGATGTTCATAATTGTTACT
TGTCGGAGTCTACTTTGGTTTTTATCAACGATTGGTACTTTTATGGCTGT
TTTAAGTGCAACATTCTACCCACGATGGCTGATAAGTGAAAACAAAACAT
ATTATAATAAAAAACTAAATAAAACTTATGAATACAATGATAGGATTGGA
ATTTACAACAAGTGTCAATTTTCTAGAAGATTGAAGAAAGTATTTTGTCG
ACCTTATGCCAGCGAACTTACAGAGGTTACTTCAATAGCTTGGCAATGTG
CATTGTTTTTCTTGGGTGTTTCATTACTATTACTTGGAATCGCTTGTATA
TTTGCTATAATTAGTTTCTGTAAACAGATCATTAAACGAAAATCATTAAT
GAATTTGGCTGGCATACTACAAACTTTTGCAGTGTACACACCAAAAATTC
AAGACTGCAGAACTGGAACGGAGGAACTGGAAGGAAAAAGGGTTTGTTTA
TGATTGTTGTCTGCATTCTTTATCCTTTGGGTTGGGACAATGACAATATC
AAGGATATATGCCATAATGAAAATCAAAAGGCCAGCAAATTCAATATGGG
AAATTGCTCTATGGGCTTGTCATTTTTTTGTGCTATTGGAGGTATGGCTG
GATGCTTCTTTTGTGCTATGTTTTCCTTTGTTGCTGACAAGGCAGTCTTC
TCAGCAAAAGTTCAAGATGAAATTTTAGAAGGCAAACGGTTGATATGTGT
CTTTTAGACTAGGCGGTAAAATGATGTTCATAATTGTTACTTGTCGGAGT
CTACTTTGGTTTTTATCAACGATTGGTACTTTTATGGCTGTTTTAAGTGC
AACATTCTACCCACGATGGCTGATAAGTGAAAACAAAACATATTATAATA
AAAAACTAAATAAAACTTATGAATACAATGATAGGATTGGAATTTACAAC
AAGTGTCAATTTTCTAGAAGATTGAAGAAAGTATTTTGTCGACCTTATGC
CAGCGAACTTACAGAGGTTACTTCAATAGCTTGGCAATGTGCATTGTTTT
TCTTGGGTGTTTCATTACTATTACTTGGAATCGCTTGTATATTTGCTATA
ATTAGTTTCTGTAAACAGATCATTAAACGAAAATCATTAATGAATTTGGC
TGGCATACTACAAACTTTTGCAGTGTACACACCAAAAATTCAAGACTGCA
GAACTGGAACGGAGGAACTGGAAGGAAAAAGGGTTTGTTTATGATTGTTG
TCTGCATTCTTTATCCTTTGGGTTGGGACAATGACAATATCAAGGATATA
TGCCATAATGAAAATCAAAAGGCCAGCAAATTCAATATGGGAAATTGCTC
TATGGGCTTGTCATTTTTTTGTGCTATTGGAGGTATGGCTGGATGCTTCT
TTTGTGCTATGTTTTCCTTTGTTGCTGACAAGGCAGTCTTCTCAGCAAAA
GTTCAAGATGAAATTTTAGAAGGCAAACGGTTGATATGTGTCTTTTAGAC
TAGGCGGTAAAATGATGTTCATAATTGTTACTTGTCGGAGTCTACTTTGG
TTTTTATCAACGATTGGTACTTTTATGGCTGTTTTAAGTGCAACATTCTA
CCCACGATGGCTGATAAGTGAAAACAAAACATATTATAATAAAAAACTAA
ATAAAACTTATGAATACAATGATAGGATTGGAATTTACAACAAGTGTCAA
TTTTCTAGAAGATTGAAGAAAGTATTTTGTCGACCTTATGCCAGCGAACT
TACAGAGGTTACTTCAATAGCTTGGCAATGTGCATTGTTTTTCTTGGGTG
TTTCATTACTATTACTTGGAATCGCTTGTATATTTGCTATAATTAGTTTC
TGTAAACAGATCATTAAACGAAAATCATTAATGAATTTGGCTGGCATACT
ACAAACTTTTGCAGTGTACACACCAAAAATTCAAGACTGCAGAACTGGAA
CGGAGGAACTGGAAGGAAAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064315-exon-scaffold_410-1575043694:227449..227509 | TCONS_00064315-exon-scaffold_410-1575043694:227449..227509 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1575043694:215934..216349 | TCONS_00064315-exon-scaffold_410-1575043694:215934..216349 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1575043694:213699..215716 | TCONS_00064315-exon-scaffold_410-1575043694:213699..215716 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1510915933:227449..227509 | TCONS_00064315-exon-scaffold_410-1510915933:227449..227509 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1510915933:215934..216349 | TCONS_00064315-exon-scaffold_410-1510915933:215934..216349 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1510915933:213699..215716 | TCONS_00064315-exon-scaffold_410-1510915933:213699..215716 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1491911889:227449..227509 | TCONS_00064315-exon-scaffold_410-1491911889:227449..227509 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1491911889:215934..216349 | TCONS_00064315-exon-scaffold_410-1491911889:215934..216349 | Clytia hemisphaerica | exon |
| TCONS_00064315-exon-scaffold_410-1491911889:213699..215716 | TCONS_00064315-exon-scaffold_410-1491911889:213699..215716 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_410 | supercontig | scaffold_410:213699..227509 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019372 | Lipome_HGMIC_fus_partner-like |
Blast
BLAST of TCONS_00064315 vs. Swiss-Prot (Human)
Match: LHPL2 (Lipoma HMGIC fusion partner-like 2 protein OS=Homo sapiens GN=LHFPL2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.689e-28 Identity = 86/231 (37.23%), Postives = 119/231 (51.52%), Query Frame = 3
Query: 75 MMFIIVTCRSLLWFLSTIGTFMAVLSATFYPRWLISXX-----XXXXXXXXXXXXXXXDRIGIYNKCQFSRRL----KKVFCRPYASELTEVTSIAWQCAXXXXXXXXXXXXIACIFAIISFCKQIIKRKSLMNLAGILQTFAGLFMIVVCILYPLGWDNDNIKDICHNENQKASKFNMGNCSMGLSFFCAIGGMAGCFFCAMFSFVADKAVFSAKVQDEILEGKRLICVF 740
M +IVTCRS+LW L +I A L A WLI + Y+ +GIY +C + + + C PYA E+ S WQ FL V + +L + + ++ + C Q I +KS+ N+ G+LQ AGLF+I+ ILYP GW D C AS + G+CS+G +F+ AIGG F CA+FS A+ A S KVQ+EI EGK LIC+
Sbjct: 1 MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYC---GHYASAYKPGDCSLGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNLICLL 228
The following BLAST results are available for this feature:
|
