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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064285 ID=TCONS_00064285|Name=TCONS_00064285|organism=Clytia hemisphaerica|type=transcript|length=1195bp
aatttcaatatttcaaacattGTCATCTTAGAAATTAGAAAATACATAAC
TTTCTCTACTAAGAATTCTTAAAATGTCCGTTTAGATAGATCTGTAGCAG
CCATTTCTTTGAGGACTTGTACGCGATTTCCAATCCTTCGAATCCATTCC
TTGTCGTCGGCCGCTCCACATTTCTTCATGAAAACGCGCCAGTAGACAAA
GGAGAGTGGGACCAATCCAGGTATTGCGAGATCTGTGCGACAATATCTGT
CCGAGAAATCACCACCAGGATACACTGTGTTATCACGGACATCGATAACA
GTGGATATGTATTTGTTGCGATGGTCGAAAAAGCCACACTTGCTCTTGTT
TGACAGTAATTCTTCACGGATATCCACAAAATCAAGGCTGGAATTCATGT
ATTTGTAAATCTCTCGATCATCANGATATCCACAAAATCAAGACTGGAAT
TCATGTATTTGTAAATCTCCCGATCATCTGGCCAAACCAAGCGTTCTGTT
TTCACAAAGATGTAATCTTCTACAAGCTTGACTTTGATGTAACGACAGGT
ATATCCTTTAGTGATGTCCACGGCTCTTTCCAAATACCGAGCAAAAATAC
CAGCTTTGAATTTGAGATCTCGGTCAATACTTCCTTGTTGTGCTGGTCCA
GAGATGTTACGTAACATGTAGGACACTGACAGATAAGTGGTGACATAGAC
ATCATAATATTTGATAGACATTGCAACCTCGTTGGTGTTTTGACCTCTGA
ACTGAGCTTCGTATCCTGATAAATCTTCTAACAAATTCTTGTAGCAGAAC
AATTGAATATTCTTATCGATCTTCCGTCTACAGGACTGGACACGAGCTGA
CATGGATCTATGCCACCGTTTCATTTGTTTGACTGTGTATTCCTCCATCT
TGGTATCAATAAGACGTTCCACTTGGTCTTTTATGATATCAAAAGGTGTA
GGATCGATGCCATAATAGTAGTCCATTGCGAAAAGCACTACTTGGTCAAA
TGGTGTATGCGACGCCAAACCTCTGATTCCCATACAAACATATTTTTGTA
CTTCACTGTCAGGGTATTGCCATTTGCAAAGCTCTTCTTCCGAGCTTAAA
CCATCAGCTTGTTGTAAATAACTTAAAGCTATTAAAGCGCAAAGTAGAAA
TGTTAAAGATGTTGCCATCTTTGACTGGTAGAAAACGCGATGGTG Run BLAST on NCBI protein sequence of TCONS_00064285-protein >TCONS_00064285-protein ID=TCONS_00064285-protein|Name=TCONS_00064285-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
HHRVFYQSKMATSLTFLLCALIALSYLQQADGLSSEEELCKWQYPDSEVQ
KYVCMGIRGLASHTPFDQVVLFAMDYYYGIDPTPFDIIKDQVERLIDTKM
EEYTVKQMKRWHRSMSARVQSCRRKIDKNIQLFCYKNLLEDLSGYEAQFR
GQNTNEVAMSIKYYDVYVTTYLSVSYMLRNISGPAQQGSIDRDLKFKAGI
FARYLERAVDITKGYTCRYIKVKLVEDYIFVKTERLVWPDDREIYKYMNS
SLDFVDIXMIERFTNT Run BLAST on NCBI transcript from alignment at scaffold_41:743830..745024 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064285 ID=TCONS_00064285|Name=TCONS_00064285|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at scaffold_41:743830..745024 (Clytia hemisphaerica)
CACCATCGCGTTTTCTACCAGTCAAAGATGGCAACATCTTTAACATTTCT
ACTTTGCGCTTTAATAGCTTTAAGTTATTTACAACAAGCTGATGGTTTAA
GCTCGGAAGAAGAGCTTTGCAAATGGCAATACCCTGACAGTGAAGTACAA
AAATATGTTTGTATGGGAATCAGAGGTTTGGCGTCGCATACACCATTTGA
CCAAGTAGTGCTTTTCGCAATGGACTACTATTATGGCATCGATCCTACAC
CTTTTGATATCATAAAAGACCAAGTGGAACGTCTTATTGATACCAAGATG
GAGGAATACACAGTCAAACAAATGAAACGGTGGCATAGATCCATGTCAGC
TCGTGTCCAGTCCTGTAGACGGAAGATCGATAAGAATATTCAATTGTTCT
GCTACAAGAATTTGTTAGAAGATTTATCAGGATACGAAGCTCAGTTCAGA
GGTCAAAACACCAACGAGGTTGCAATGTCTATCAAATATTATGATGTCTA
TGTCACCACTTATCTGTCAGTGTCCTACATGTTACGTAACATCTCTGGAC
CAGCACAACAAGGAAGTATTGACCGAGATCTCAAATTCAAAGCTGGTATT
TTTGCTCGGTATTTGGAAAGAGCCGTGGACATCACTAAAGGATATACCTG
TCGTTACATCAAAGTCAAGCTTGTAGAAGATTACATCTTTGTGAAAACAG
AACGCTTGGTTTGGCCAGATGATCGGGAGATTTACAAATACATGAATTCC
AGTCTTGATTTTGTGGATATCNTGATGATCGAGAGATTTACAAATACATG
AATTCCAGCCTTGATTTTGTGGATATCCGTGAAGAATTACTGTCAAACAA
GAGCAAGTGTGGCTTTTTCGACCATCGCAACAAATACATATCCACTGTTA
TCGATGTCCGTGATAACACAGTGTATCCTGGTGGTGATTTCTCGGACAGA
TATTGTCGCACAGATCTCGCAATACCTGGATTGGTCCCACTCTCCTTTGT
CTACTGGCGCGTTTTCATGAAGAAATGTGGAGCGGCCGACGACAAGGAAT
GGATTCGAAGGATTGGAAATCGCGTACAAGTCCTCAAAGAAATGGCTGCT
ACAGATCTATCTAAACGGACATTTTAAGAATTCTTAGTAGAGAAAGTTAT
GTATTTTCTAATTTCTAAGATGACaatgtttgaaatattgaaatt Coding sequence (CDS) from alignment at scaffold_41:743830..745024 >TCONS_00064285 ID=TCONS_00064285|Name=TCONS_00064285|organism=Clytia hemisphaerica|type=CDS|length=801bp|location=Sequence derived from alignment at scaffold_41:743830..745024 (Clytia hemisphaerica)
CACCATCGCGTTTTCTACCAGTCAAAGATGGCAACATCTTTAACATTTCT
ACTTTGCGCTTTAATAGCTTTAAGTTATTTACAACAAGCTGATGGTTTAA
GCTCGGAAGAAGAGCTTTGCAAATGGCAATACCCTGACAGTGAAGTACAA
AAATATGTTTGTATGGGAATCAGAGGTTTGGCGTCGCATACACCATTTGA
CCAAGTAGTGCTTTTCGCAATGGACTACTATTATGGCATCGATCCTACAC
CTTTTGATATCATAAAAGACCAAGTGGAACGTCTTATTGATACCAAGATG
GAGGAATACACAGTCAAACAAATGAAACGGTGGCATAGATCCATGTCAGC
TCGTGTCCAGTCCTGTAGACGGAAGATCGATAAGAATATTCAATTGTTCT
GCTACAAGAATTTGTTAGAAGATTTATCAGGATACGAAGCTCAGTTCAGA
GGTCAAAACACCAACGAGGTTGCAATGTCTATCAAATATTATGATGTCTA
TGTCACCACTTATCTGTCAGTGTCCTACATGTTACGTAACATCTCTGGAC
CAGCACAACAAGGAAGTATTGACCGAGATCTCAAATTCAAAGCTGGTATT
TTTGCTCGGTATTTGGAAAGAGCCGTGGACATCACTAAAGGATATACCTG
TCGTTACATCAAAGTCAAGCTTGTAGAAGATTACATCTTTGTGAAAACAG
AACGCTTGGTTTGGCCAGATGATCGGGAGATTTACAAATACATGAATTCC
AGTCTTGATTTTGTGGATATCNTGATGATCGAGAGATTTACAAATACATG
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064285-exon-scaffold_41-1491911889:743830..745024 | TCONS_00064285-exon-scaffold_41-1491911889:743830..745024 | Clytia hemisphaerica | exon |
| TCONS_00064285-exon-scaffold_41-1510915933:743830..745024 | TCONS_00064285-exon-scaffold_41-1510915933:743830..745024 | Clytia hemisphaerica | exon |
| TCONS_00064285-exon-scaffold_41-1575043694:743830..745024 | TCONS_00064285-exon-scaffold_41-1575043694:743830..745024 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:743830..745024 . |
Blast
The following BLAST results are available for this feature:
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