TCONS_00064256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064256
Unique NameTCONS_00064256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064256 ID=TCONS_00064256|Name=TCONS_00064256|organism=Clytia hemisphaerica|type=transcript|length=362bp
cccaaccatggtgggcaacATTTTTTTCCTAAATCTTGCCCCCCCCACTc
aaatggctcgccggggcccatgaATCTGCATACTCTCTTCTCTCTCTCAA
TATTGTAAAAACTGTTTGCTGGAGGGtacaaagattttcttgaaatagtT
GGTCGACATCAATGATCTTTGACATTAATGATCTTTGACATTTTCAGCTC
TGTCACATCCAAAATCAATGTCAAGCATGAAATCTTACTTGTGTTTTACT
GCCTAAATTCTCAACTTGGGAAGACCACTTACTCGACCTAACTTAAACTA
GGACTACAATCAGAAAACATTCCCAGTTCAAATCTAATGATAAAGATAAT
TTACAAGGCCTA
Run BLAST on NCBI

transcript from alignment at scaffold_41:65862..66223

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064256 ID=TCONS_00064256|Name=TCONS_00064256|organism=Clytia hemisphaerica|type=transcript|length=362bp|location=Sequence derived from alignment at scaffold_41:65862..66223 (Clytia hemisphaerica)
TAGGCCTTGTAAATTATCTTTATCATTAGATTTGAACTGGGAATGTTTTC
TGATTGTAGTCCTAGTTTAAGTTAGGTCGAGTAAGTGGTCTTCCCAAGTT
GAGAATTTAGGCAGTAAAACACAAGTAAGATTTCATGCTTGACATTGATT
TTGGATGTGACAGAGCTGAAAATGTCAAAGATCATTAATGTCAAAGATCA
TTGATGTCGACCAactatttcaagaaaatctttgtaCCCTCCAGCAAACA
GTTTTTACAATATTGAGAGAGAGAAGAGAGTATGCAGATtcatgggcccc
ggcgagccatttgAGTGGGGGGGGCAAGATTTAGGAAAAAAATgttgccc
accatggttggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040276XLOC_040276Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064256-exon-scaffold_41-1491911889:65862..66223TCONS_00064256-exon-scaffold_41-1491911889:65862..66223Clytia hemisphaericaexon
TCONS_00064256-exon-scaffold_41-1510915933:65862..66223TCONS_00064256-exon-scaffold_41-1510915933:65862..66223Clytia hemisphaericaexon
TCONS_00064256-exon-scaffold_41-1575043694:65862..66223TCONS_00064256-exon-scaffold_41-1575043694:65862..66223Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:65862..66223 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.94221	2.12526	4.22606	7.41322	2.58431	1.7425	1.87199	1.53294	1.71604	0.726108	2.69808	2.4763	2.03195	2.66539	1.7568	0.964784	0.494263	0.99406	2.0385	1.89283	2.29218	2.45528	0.584839	0	0.92991	0.444382	2.58338	3.25803	1.13921	1.47854
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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