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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064208 ID=TCONS_00064208|Name=TCONS_00064208|organism=Clytia hemisphaerica|type=transcript|length=535bp
CCAAACTATTCCAAACCATTCCAAACCTAAAGGAAGATATCTTTTCCGAA
TGATTTAACAACTGTCGGATTGAGGACTGAGGCATTTCCTTACATAAAGG
TTGATTGATTACGATGCAAAATCCATCCTCTGTGTTGACTTTTGAAGATG
TTGCCAAAACTGTGAGTTTTTCTGGAGTTATTAACCTGTGTTGCACACGC
AGTTGCTTTAATGTTCAACTAGCTTCACTTGGACGTTAGATTGGCATTGT
TTTGACGTCCTACGTAGGTTAGATTGTAAATCTTCTACAACGACTTTTCA
GTTAAAGTCATTGTCTTCGTGGCCCTCATCTTAGTTACTGTGCGGTttca
agagaagaaaaaaatacaagtggagatatacacgttttttttttataagg
aaccttaactttgctctgagcctggagttccttatttttacagagaattt
cagtctcaaagttccttatcgagttccttactacataggaaattttgaac
tttttgccccttgaaagatcaaaatttggtcaaat Run BLAST on NCBI transcript from alignment at scaffold_41:371707..372764- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064208 ID=TCONS_00064208|Name=TCONS_00064208|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at scaffold_41:371707..372764- (Clytia hemisphaerica)
CCAAACTATTCCAAACCATTCCAAACCTAAAGGAAGATATCTTTTCCGAA
TGATTTAACAACTGTCGGTAAGACATTGCAAACTTTCGTTAAAATTAGTT
CAAATATTACTTGTGCATACACTTCTAATAATCTAGTAACAAAGCTTACT
TAAGACTTTCTCTCCGCTATGTTAAACTCAAAATGGAAAAGACCAGGAAA
AGCTCTGATCAATTAGTGCACTCTGACCTTTTTGTCTGAAGTAATAAGTG
TACTCTGACCCCTTTTGTCTGAGTGCATCTCATTTCTAAATTGTTTTTAA
AACTAATTAAACAAGGAGGTCTTTTTCATTGAACTAGTGACCTTGGTCCT
CATTTAAACATTCAAATCTATATTAGGGACCGTTTTTCAAATCAAGCTCA
ATAATATGCCTCAAACCTCTCAATCTTACATCACAAGGTTCAATATATTA
AGTACCTTGACATGTCACTCAGGCACAAACAAGGTCTATTTATGTCGCCA
CAACTTTTTCTAAGGTGTATTTTGGTTTGGTTTGGGTGTGGTTTATTAAT
AATTGATATCTGCATTCTTCTCTCTACTTTTTTTTCACAGGATTGAGGAC
TGAGGCATTTCCTTACATAAAGGTTGATTGATTACGATGCAAAATCCATC
CTCTGTGTTGACTTTTGAAGATGTTGCCAAAACTGTGAGTTTTTCTGGAG
TTATTAACCTGTGTTGCACACGCAGTTGCTTTAATGTTCAACTAGCTTCA
CTTGGACGTTAGATTGGCATTGTTTTGACGTCCTACGTAGGTTAGATTGT
AAATCTTCTACAACGACTTTTCAGTTAAAGTCATTGTCTTCGTGGCCCTC
ATCTTAGTTACTGTGCGGTTTCAAGAGAAGAAAAAAATACAAGTGGAGAT
ATACACGTTTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGCCTGGAG
TTCCTTATTTTTACAGAGAATTTCAGTCTCAAAGTTCCTTATCGAGTTCC
TTACTACATAGGAAATTTTGAACTTTTTGCCCCTTGAAAGATCAAAATTT
GGTCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064208-exon-scaffold_41-1575043694:372698..372764 | TCONS_00064208-exon-scaffold_41-1575043694:372698..372764 | Clytia hemisphaerica | exon |
| TCONS_00064208-exon-scaffold_41-1575043694:371707..372174 | TCONS_00064208-exon-scaffold_41-1575043694:371707..372174 | Clytia hemisphaerica | exon |
| TCONS_00064208-exon-scaffold_41-1510915933:372698..372764 | TCONS_00064208-exon-scaffold_41-1510915933:372698..372764 | Clytia hemisphaerica | exon |
| TCONS_00064208-exon-scaffold_41-1510915933:371707..372174 | TCONS_00064208-exon-scaffold_41-1510915933:371707..372174 | Clytia hemisphaerica | exon |
| TCONS_00064208-exon-scaffold_41-1491911889:372698..372764 | TCONS_00064208-exon-scaffold_41-1491911889:372698..372764 | Clytia hemisphaerica | exon |
| TCONS_00064208-exon-scaffold_41-1491911889:371707..372174 | TCONS_00064208-exon-scaffold_41-1491911889:371707..372174 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:371707..372764 - |
Blast
The following BLAST results are available for this feature:
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