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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064137 ID=TCONS_00064137|Name=TCONS_00064137|organism=Clytia hemisphaerica|type=transcript|length=2552bp
CAATTTTGAAAACATCACCTAGTAACTAAGGAAATTTCACCTTAGCAACT
ATAAATTTATTTAACATAATGTCGAGAAATTTAATtgcaaatttcttcaa
aaaaattaaatttcaaatatttttggttttggaGGTGCTGGCCACTTCAT
TCTAAAGCAAGAAAATTCTTCTAAAATaaactcaagattttttttttttg
ttcaacaTCAGAAACCTTACAAAAATGCAGactTTCAAGATCACTCTCAC
TATCATCCTCATATCTGCCTTTTTCTTCATCCACCAATCATCTGCTTACG
TCATTAACGCACGTGACGTATACCATACACGTAATTACGAGGGATGTCGC
CGTGAAGTTGACGGCGAGTACGGTGCTTGTTTGAGTAAAATTAACGGCTC
AATGTCAGAGGACGAAGTTGTGACGGCAAAACGGAATTGTGATCGAGCCA
AGAAGGAGGATAAGAGTAAATGTCAATAACTAGAACACACGGAGATGTGA
AGCTAAACACCCTAAGCAGTATAAAATGTGTCCAGGAAAAAAATGAGACA
GAATTAATatgtaaataagaaaaaattctaATGATTCAAGTATAATTTCA
AGACCTaataactcaaaaaaattgtaacaacCTTGGAAATGAAATATCCT
TTTCTTGAACAAGGAAATTTAATCTcgcagctgacacacaacgttatttc
aacgttcatctaacggaCGTTTGAACATCAAATtgacgttgaaagaacgt
tgtgtgggcttttatttttaatcattcTCAATCCTAGTGAGATGATGagt
ttttgtgaattttattttttttatagaatCTGTCCTggtttttttccgga
cacattTACACCTATTAAACTTTACACCgatggatgtttttttcatcaaa
cttCTATTTGTATACAGTACGGAATATACATTCTGCAATAATTACCAAGa
aaaacacacccctgtctcacacccCCAGTGGAattttttcccacagtggg
aaTAAACATTTCTAGTAAAATCCCAACGGGGATATAAATCATATTGTTCC
AAGGGTAAAGAATCAAgtgaggatggttttggagtgcaatttttaaacat
tgaagtttgaatggggatgaaaacaaaatcattttcccagtgaggctgaa
attctatttttcccACTGAAGACAGAATTTCTGCCTGATTTTCCACCAAT
GAGATCTACAGGGGTTTGCAAAAATTCTCTATCTATTTTCTACATTTCAA
AACTGCCTTAGGGTATTTAGCTCACGTTGTCCAGTCGAATATtttcaaca
aagaaaatttatctatgtttttttttaatatatctttttttttaccttaa
aaTGCAATCACTTACTTTAAAAATCAACCTGTCTGTTGTGCTTCGAGTAA
TTTTCACGAAAACTCTCCGCACCTGAAACTGCATACCTTATCGGCAAAAA
CTAAGTCGACCCTaagtgagaaaattttggcttggtgactaaaattaagg
ccgactaaaaatttgggccttTCCTTAACCCACTTTTCATATCGGTATTA
CTTTAGCAAAGAGTTTACGAACAAATAatcattgaaaaatttttagtcag
tcttaattattagtcggcccttagtgacaaAATTAGGGctgactaataat
taaggccaactaaaattaaggccgactaagttttggccgataaggtatct
cAACAGTCTAAACGTAATGTAAATGCATCAAAGTGTACAGAAAcacaggc
acgacggaagctttttatacaTGGTAcagcgaatgaggaaatttaagcaa
ttttatAGCGGTTTTACCGACGAAGAGAAAAATATCaggtttttttgtga
aaatctgatACGGTGGCCGcccgtacctgccgtacccgtcaAGTATGTAA
CAAATTACATTTAGACGTACGTTTACCTCTAAATCTTTCAGCTTTTATTG
GAGCAATTAGAGATTTAAAAACAATGCAAAAGCTTTAGATTAACGTTTAA
AAGAACACCACACTGGtacattaaagggacataaaagtattaaaatgtaa
acattgcgcgaaccacatgtcattaaagagaacaattaaaaccacttgtc
caaaacaaactttcaaaacaattgaataaacaaaattagccatatttgat
tttttattttgacatgtgacatttgttttgattttgtatccgctgcatac
agtttgtttaaaaatttcgcaagtactgctATGTCCCTTTAACCGTGTTA
TAAAATAGACTGAAATATTGCTAAAATAGTTTCATGTCACGGACAAGACg
attagaaaatgaaatttaatgtttttttttctttttgtaattcattttct
tttaaatttgagCTAAATTTTGAAGAATGTAAGTacgaacaatttcaaaa
aatatattatgcAATGATTTAgagaaattacttttttttggGTCAATTAA
CTACAATCTTCAGCATTCAATACCTCATTCAATAACTCATTATCTAAACT
GAGCTTAGAATAATTGAGATAAGATACAATTCCCTGCTCGCAatcaatat
at Run BLAST on NCBI transcript from alignment at scaffold_409:57406..60200- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064137 ID=TCONS_00064137|Name=TCONS_00064137|organism=Clytia hemisphaerica|type=transcript|length=2795bp|location=Sequence derived from alignment at scaffold_409:57406..60200- (Clytia hemisphaerica)
CAATTTTGAAAACATCACCTAGTAACTAAGGAAATTTCACCTTAGCAACT
ATAAATTTATTTAACATAATGTCGAGAAATTTAATTGCAAATTTCTTCAA
AAAAATTAAATTTCAAATATTTTTGGTTTTGGAGGTGCTGGCCACTTCAT
TCTAAAGCAAGAAAATTCTTCTAAAATAAACTCAAGATTTTTTTTTTTTG
TTCAACATCAGAAACCTTACAAAAATGCAGGTAATTAAATTATATTATTT
TTGATTCGATTATTTCACTGAAGATTGCAATCCTTGATGGCATGAAATTT
TGAGTATAAAATTAACTTAAAACTAGTTTTTTTTACTCTACTAGTTATTT
TGAATTCACAAAAATTTGGTATGAAAAAAGTCAACAATTTTGACATTATC
TGCCAAGGATTTTTTGAGTTCAATTACTTAATGAAAGTCAGCTATAATCG
AATTGCAAATTTTTTCTTTTAAGACTTTCAAGATCACTCTCACTATCATC
CTCATATCTGCCTTTTTCTTCATCCACCAATCATCTGCTTACGTCATTAA
CGCACGTGACGTATACCATACACGTAATTACGAGGGATGTCGCCGTGAAG
TTGACGGCGAGTACGGTGCTTGTTTGAGTAAAATTAACGGCTCAATGTCA
GAGGACGAAGTTGTGACGGCAAAACGGAATTGTGATCGAGCCAAGAAGGA
GGATAAGAGTAAATGTCAATAACTAGAACACACGGAGATGTGAAGCTAAA
CACCCTAAGCAGTATAAAATGTGTCCAGGAAAAAAATGAGACAGAATTAA
TATGTAAATAAGAAAAAATTCTAATGATTCAAGTATAATTTCAAGACCTA
ATAACTCAAAAAAATTGTAACAACCTTGGAAATGAAATATCCTTTTCTTG
AACAAGGAAATTTAATCTCGCAGCTGACACACAACGTTATTTCAACGTTC
ATCTAACGGACGTTTGAACATCAAATTGACGTTGAAAGAACGTTGTGTGG
GCTTTTATTTTTAATCATTCTCAATCCTAGTGAGATGATGAGTTTTTGTG
AATTTTATTTTTTTTATAGAATCTGTCCTGGTTTTTTTCCGGACACATTT
ACACCTATTAAACTTTACACCGATGGATGTTTTTTTCATCAAACTTCTAT
TTGTATACAGTACGGAATATACATTCTGCAATAATTACCAAGAAAAACAC
ACCCCTGTCTCACACCCCCAGTGGAATTTTTTCCCACAGTGGGAATAAAC
ATTTCTAGTAAAATCCCAACGGGGATATAAATCATATTGTTCCAAGGGTA
AAGAATCAAGTGAGGATGGTTTTGGAGTGCAATTTTTAAACATTGAAGTT
TGAATGGGGATGAAAACAAAATCATTTTCCCAGTGAGGCTGAAATTCTAT
TTTTCCCACTGAAGACAGAATTTCTGCCTGATTTTCCACCAATGAGATCT
ACAGGGGTTTGCAAAAATTCTCTATCTATTTTCTACATTTCAAAACTGCC
TTAGGGTATTTAGCTCACGTTGTCCAGTCGAATATTTTCAACAAAGAAAA
TTTATCTATGTTTTTTTTTAATATATCTTTTTTTTTACCTTAAAATGCAA
TCACTTACTTTAAAAATCAACCTGTCTGTTGTGCTTCGAGTAATTTTCAC
GAAAACTCTCCGCACCTGAAACTGCATACCTTATCGGCAAAAACTAAGTC
GACCCTAAGTGAGAAAATTTTGGCTTGGTGACTAAAATTAAGGCCGACTA
AAAATTTGGGCCTTTCCTTAACCCACTTTTCATATCGGTATTACTTTAGC
AAAGAGTTTACGAACAAATAATCATTGAAAAATTTTTAGTCAGTCTTAAT
TATTAGTCGGCCCTTAGTGACAAAATTAGGGCTGACTAATAATTAAGGCC
AACTAAAATTAAGGCCGACTAAGTTTTGGCCGATAAGGTATCTCAACAGT
CTAAACGTAATGTAAATGCATCAAAGTGTACAGAAACACAGGCACGACGG
AAGCTTTTTATACATGGTACAGCGAATGAGGAAATTTAAGCAATTTTATA
GCGGTTTTACCGACGAAGAGAAAAATATCAGGTTTTTTTGTGAAAATCTG
ATACGGTGGCCGCCCGTACCTGCCGTACCCGTCAAGTATGTAACAAATTA
CATTTAGACGTACGTTTACCTCTAAATCTTTCAGCTTTTATTGGAGCAAT
TAGAGATTTAAAAACAATGCAAAAGCTTTAGATTAACGTTTAAAAGAACA
CCACACTGGTACATTAAAGGGACATAAAAGTATTAAAATGTAAACATTGC
GCGAACCACATGTCATTAAAGAGAACAATTAAAACCACTTGTCCAAAACA
AACTTTCAAAACAATTGAATAAACAAAATTAGCCATATTTGATTTTTTAT
TTTGACATGTGACATTTGTTTTGATTTTGTATCCGCTGCATACAGTTTGT
TTAAAAATTTCGCAAGTACTGCTATGTCCCTTTAACCGTGTTATAAAATA
GACTGAAATATTGCTAAAATAGTTTCATGTCACGGACAAGACGATTAGAA
AATGAAATTTAATGTTTTTTTTTCTTTTTGTAATTCATTTTCTTTTAAAT
TTGAGCTAAATTTTGAAGAATGTAAGTACGAACAATTTCAAAAAATATAT
TATGCAATGATTTAGAGAAATTACTTTTTTTTGGGTCAATTAACTACAAT
CTTCAGCATTCAATACCTCATTCAATAACTCATTATCTAAACTGAGCTTA
GAATAATTGAGATAAGATACAATTCCCTGCTCGCAATCAATATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064137-exon-scaffold_409-1575043694:59971..60200 | TCONS_00064137-exon-scaffold_409-1575043694:59971..60200 | Clytia hemisphaerica | exon |
| TCONS_00064137-exon-scaffold_409-1575043694:57406..59727 | TCONS_00064137-exon-scaffold_409-1575043694:57406..59727 | Clytia hemisphaerica | exon |
| TCONS_00064137-exon-scaffold_409-1510915933:59971..60200 | TCONS_00064137-exon-scaffold_409-1510915933:59971..60200 | Clytia hemisphaerica | exon |
| TCONS_00064137-exon-scaffold_409-1510915933:57406..59727 | TCONS_00064137-exon-scaffold_409-1510915933:57406..59727 | Clytia hemisphaerica | exon |
| TCONS_00064137-exon-scaffold_409-1491911889:59971..60200 | TCONS_00064137-exon-scaffold_409-1491911889:59971..60200 | Clytia hemisphaerica | exon |
| TCONS_00064137-exon-scaffold_409-1491911889:57406..59727 | TCONS_00064137-exon-scaffold_409-1491911889:57406..59727 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_409 | supercontig | scaffold_409:57406..60200 - |
Blast
The following BLAST results are available for this feature:
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