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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064045 ID=TCONS_00064045|Name=TCONS_00064045|organism=Clytia hemisphaerica|type=transcript|length=1802bp ATAAGTTTTAACGTATTTTCTCAATTTCAAGAAAGATGGAGTCACCGGTG CTGAGCTGACATTCTCTGAAATCATAAAGAACTCCCGACAACTTGGCTCC TTTTtccatcaaaagaatttgaaaataaacgAAAGAGTCTGTTTACATTT ACCAAACTGTATCGAATACTCTTACTCAATGCTCGGAGCGTTAGCAAACG GTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCATGAGATGCAC CATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGACCGCCCATTT ATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATAGAAACAATGA TATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTCG GATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTGTCAGCTAT CGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACAG GGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGACGAGTAACGTT TTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAGATATCTTAGC CGTTCTCCCTATGTATCACATCTACggattaaattttattttgttgacaA ATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTTCGACCCAGTG CAATTTTTATCCTGCATCCAAGACAACAAGGTCAGTAGGATCCCGATAGT ACCTCCAATTGCCTTATTCATGTTGAACAACCCAATGGTGGCAAATTACG ACTTATCGCACGTCAAATCTGTCATCGTAGGAGCGGCGCCAATGGATGAA GAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGATTCTGCAACA AGGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATG AATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAG TACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTCCTTACGAACA AGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGTTACTTAGACA ACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGCTACGCTCT GGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTCATCGACCG TTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTGCGCCTGCCGAGT TGGAAGATTTATTGATTTCTCACGAAAACATTGTTGATAGTTGCGTGATT GGCGTCCCATGCGAGAGAGCTGGAGAAATACCACGCGCCTATATCGTCAA AAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTAGGTG AACGATTTTCTGATCATAAACATCTCCGTGGTGGAGTACAATTCGTAGAA CAATTACCGAAATCGGCCTCAGGAAAACTCCTTCGTAGAGTGCTTAAAGA TCAATATTTGGAGGAGAATGAGTAAGCTTGATTTCATGAGGGGTACTGTA TATCACTTCGAAGAGAGCGTTATAGAACGGGGATTTCTTGAATTTCcgtg atttttctgtttgacatTTGGGATTCGGGATTTTCGATTCTGTaactttt ttagaatttttagatttaatCTTTGGAAAAGTGCGTACCAGATATTTTTC AAGTAATTTACCCTCGGATATTTGAAAGTACAAAACCATAAAACAGCATT TGTATTCTGACACGGTCTAAAAGTTGGGTATACATCAAAACCCAATAGAG TT Run BLAST on NCBI protein sequence of TCONS_00064045-protein >TCONS_00064045-protein ID=TCONS_00064045-protein|Name=TCONS_00064045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=448bp
MLGALANGMAVTTVNPAYTAHEMHHQVKTSTPKVVITTAHLLDTARQASE NSSIETMICLDDTSISDSGVVNMSDVLQNGDENFSTDLSAIDPEKDIAFI LYSSGTTGLPKGVMIEHHGMTSNVLQIRDFFGENMPKDILAVLPMYHIYG LNFILLTNLYHGNTVHSLPGFDPVQFLSCIQDNKVSRIPIVPPIALFMLN NPMVANYDLSHVKSVIVGAAPMDEEATKAFRRKFPTMILQQGYGMTESNI THLQPNDESLHKAGSCGQTFADTEYKVVCLDSGEALGPYEQGEVYTRGRQ QMLGYLDNEKATTETILEDGWLRSGDLGYYDDENNLFVIDRLKELIKYKG FQVAPAELEDLLISHENIVDSCVIGVPCERAGEIPRAYIVKKPGSDLTED EVKDFVGERFSDHKHLRGGVQFVEQLPKSASGKLLRRVLKDQYLEENE Run BLAST on NCBI transcript from alignment at scaffold_407:272055..280278+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064045 ID=TCONS_00064045|Name=TCONS_00064045|organism=Clytia hemisphaerica|type=transcript|length=8224bp|location=Sequence derived from alignment at scaffold_407:272055..280278+ (Clytia hemisphaerica) ATAAGTTTTAACGTATTTTCTCAATTTCAAGAAAGATGGAGTCACCGGTG
CTGAGCTGACATTCTCTGAAATCATAAAGAACTCCCGACAACTTGGCTCC
TTTTtccatcaaaagaatttgaaaataaacgAAAGAGTCTGTTTACATTT
ACCAAACTGTATCGAATACTCTTACTCAATGCTCGGAGCGTTAGCAAACG
GTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCATGAGATGCAC
CATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGACCGCCCATTT
ATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATAGAAACAATGA
TATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTCG
GATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTGTCAGCTAT
CGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACAG
GGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGACGAGTAACGTT
TTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAGATATCTTAGC
CGTTCTCCCTATGTATCACATCTACggattaaattttattttgttgacaA
ATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTTCGACCCAGTG
CAATTTTTATCCTGCATCCAAGACAACAAGGTGAGTTTTCGTCATTCTGA
ATAACTTTTGCCGAGCTCTCTCAGATATCAAATACCAACGACCAGCGGAT
TTCAAACAGTCTTTTTCTGGACCAATGAAAGTCATTGTCTTCTTTCGAAA
TGATTCTCGTTTACCTTCGTTTCTTCGATGTATTTTTACGTCTCCTCAGG
TTATATTTAAGAGTAAATCAACCTTAACCCTGGAGtttgagatgccttgg
agtttttacaagctgcttaaaactgattggttatttttaaacaatagaga
tgacgcgttctttagaaaaagtaataaagtcgtttgtctcaacatttaac
gaccaacagagtcatcaaagaacttgtaaaaactccagcatgaCCCTGGA
GTTTCTCAATGCTGGTCAACCAAAGCTCTGGTCAAGTTAAAATTCCAAAT
TATGATAAGCATAAGCTGTATAAACTAATAAGTTgtatccaaaaaaaaat
attacattttAGGTCAGTAGGATCCCGATAGTACCTCCAATTGCCTTATT
CATGTTGAACAACCCAATGGTGGCAAATTACGACTTATCGCACGTCAAAT
CTGTCATCGTAGGAGCGGCGCCAATGGATGAAGAAGCTACTAAAGCGTTT
CGAAGAAAATTCCCAACCATGATTCTGCAACAAGGTATACTTTAATTGGT
TGCTTTGATCTACGTTATCGTCAAGATAATACCATCTCAAGGTGTTTTGA
GTCGATGATATCTCCTCtcagtcaaaaaaatgtttgatatcCTATATACT
TTGTTCCAGTATTGGAGAGATTGACAAACTTGGAGAAGTTTTCCCAGTGA
AACTGATAACGTTTTGATGAAAGGACAAGATAGATAGAGCGATTATATGC
AAAGTTGATGCGTAGAATATTTAAATTGCCGTATAATCTTGTCACCTGTA
GGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATGA
ATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAGT
ACAAGGTACAATCTCCCTCACATAACTTCATCATAACTGTTGTCTGTTCG
TTGTGCAAAGATGTCCATAATGTGACCCCCTTTTACAGGATATTCTACCC
CAGAAAAGAAAGAtgattgaaattctttttgtcaaacctgtgattatttt
ttaaatgtttttcataaaacacCCCTTTGAAATAGGTAGGCTAAACAATT
ACTACAGTGACAAAAATCTCAGGTCTcgaaaaaatcttaatttttcatca
ttttcaaattttcaaatatatatgaTATATCGAATTATACTCCCCAAAAG
CACCTTTCTAAACGTCGACAATTTACAATAGCATTTAAGAAGGCGGTGAG
GAAATATTGAAAGAGTAAAGTATTCACATACTTTCGAGACAAATTATAAT
AATCTTTCCAACCAACGGAAAAGAATGCTTGCTATTTACTAGCCAGAAAA
GCCCATTTATTTAGTGGTGGATGTCGTTACATTTCTAACATGCCCAAAAG
TATTTATAATAGCGGGACTTCTCCTCGCCTAAAGAACTACGGATATGCAA
ACAATTAACTCGacaacaaaaagattttttaagtaTACAGTAGGTATATC
ATATTGACAATGaatatgaaaaatacaaatgagaatttagattttttttt
cgtttttttttcggttgatAATTGCTCGGTTATTGGAATCGTCTTGTGGA
AGGTGTATTGATGAAGAGATTGTCTTCCCGGGGAGTTGATGGTGGAGATA
AGGCCTCGATGGATGTCATTTCAATTTCGTTGCTAGCCAATGATCTTTCC
AAACAGTCATCCTCGATCAGTTGGTATTCTCCTTCTCCGAGTGTTTTTGG
GAAGGTTTGCGGAGATGTTAAATTTTCTTGATCGTTTTGTGGGTTGACTA
GTGTCTTTGGTTGTTGCTCTTTTTGTGTTTtagtaaatttatttttaggt
GGACAGATCCGCCTCAATGACCTCGGGAGCTGTCGTTTAAGTTTTGAGAG
ATCCTTTTCCACATCTatgatttcattttgaataaaattcatGTTATCTT
CATCAGGGAAAGCATCCTTTTTTAACGATCTGCGTCCCGATTTTAAGAAC
TTTAAATaactctttttgtttttaatttctttttgtagGAAGTCGAGATT
TTCCTCGGCGGAGTTATCTTCCGTAACGTGCTCTGTTTTCGAggtgatat
ttttttcttcggCTCTTGTTTGAGAAGCAGTAACGTCTTTTGTTTGTTTG
CGTGGACAAAACTGCAAGGAAGAGCTGATTTGGTTCAATCTACCAGTGAC
AGTGCAGTATCCATTCGTAACAGTGATAATGTCAAGATTAGGTTCTTGGA
ATGCGCCTTGGCTTTGGCAGTTCCCAACCTCTTTGTTACTGTCACATTCT
GATTCAATTGGTGAGATGAACTTTTCTGCTTTGTCTGATTTCATCCCTTC
TTTATTTGGATCAGCTGGGCTTACATTGAAAGATGGCAGAATTTGACTTG
GACTGTCAGTGGCTATCAGAGATGCATTTTGAATCATGCCTTGTTCGTTC
ACAGCTTCGATTAGTTCTGGTTGCTCTTGGGCTGAAATTTCGCCAATCAA
CTTAATTGAAGGTTCTTCTGATGTGACAGTCTCGACGAACGTATTGAGTT
TCAGATTATCATTTGCTTCGTTTTCAGTGTCTTTCAACAAAGCTAAAGGT
GTGATCGTCGGCTTATCATCCTTAGCACAGGGACCATCACCATCAGAAAA
TTTATCTTTGCCATCGTTTAAATCGCAAGCAGAAGAGTCTTCTACATCAA
TCCGTTGACCATTTGACGCAACAGAAACATTCTCAACAATGCATCGATCA
AACTCCTCATGTTTGACTTCTTCGGAATAGGTTGTTTCGTTTGCAGTGGT
CAAAAGCTCGCTCGAACTTTCTTTCAACATCATCCGTTGGTAATCTCCAG
CATCGGAACTTTCAGAAATCTTTTCTGCGATGACATCATCGTTAGACTGG
TCGGGAGAAATTTGCTCAGTAACGATCAGCTGTTGATCGTTTAACGCGAC
AGGAACATTTTGAACAACTTTATTTTCATCGAAAGATTCCTGTTTGACAC
TTTCAACACCAGGATAAGTTGCATGTGTTTTAGTGATGGTTTGGCCTTCA
AAAACTTTGTCATCAGATCTGGCAGCTTTTGTCTGTTCGACAGCCTTCTT
TTTCGGAAGAGGTTCTTCAGAGACATCTTCCATTTCAACATCAGTGACCT
CACATTTCGTCTCTTTTCCGTGACGTTCAAGATGTTTACCAGTGATAGGC
TCCTCAGAAAGATCCTCCATTTTAACATCATTGTCACATTTCGTCTTTTC
TCTGTGATCTTGTTCAACATGTTCTACAGCGACAGGTTCCCCAGAAAGAT
CCTCCATTTCGATTTCATTGGGGTATGTAGGATCGATCATGAATCGTCTC
CCGAACGATTCGAATCGATCCCATCGTTCCTTAGATGCGAAGGGGATATT
ATCTTCACTTCGATTGAAGTAATCCACTGCTTGTTGGAAAGTTAGAGAAG
CGTAATCTGAAGCCGTGAACAGAGAGGGGAACATTGATGTCTTTTGGGTG
TCTTGCGGCGAGTTGAATGGGTTGGTTGGTGGCGAGTGGAATAAATTGTT
CGGTGCAGAGAAGGGGCTGTTCGGTGGCGAGATAGTGTTTCCATTCATGA
TAATGTTGTATTCATGTTCAATGTGATCGATCATTACTCTCTTTTTTTCT
GGTGTTATGAAAGGGTTGTTTTCTACCGAAGCAAGTTCATGTTGGAGTTG
GAGATATCTTTGGTACAAAGGATGAAATTGTTCTGCAGACATTTCTTCCT
CATCAACTTCCATAGGCTCGACCTGGTGTAGATAAAAAAGAAGGATTGAT
TTTTAACGAGCTTGATGGCTAGGACCGGATATTGTTAAAGAAgtggaaaa
aaaaaagtttgaagaaaaagatctactGGTCGTTGACTCACAACAGAGTA
TAAGGGTTTGATGGCTAAGTATAGTATGGCATAATTATGTGTGTGACCTT
TACTTTATTTTAAAGGATGAGTGTCTTATGTACCTCGTTATAACAATCTT
GGTCGATGTCCATAGGTTCTTCCCCGCACTGCATTTTCACTGGTTGTCCA
CCATAACAGTCCTCGCTTCTCATTGGTTGTTCACCATAACAGTCCTCGCT
TCTCATTGGTTGTTCACCATAACAGTCCTCGCTTTCTATTGGTTGTCCAC
CGTAGCTCTCGCTTTCTATTGGTTGATCGCGAGGATCTATTTCTATTCTT
TGTTGCTGTTTGGCAAGCtgcaaaataaaaatgaattatgtCAATTCTTT
TGACCTAGCTTTTAAAGTGTGTAAGTTGATTGcgagaaaatttctttttt
gaccaAGTAAAAAGGATAATCAGTAGCCCAAGAGCTCAGACGATAAATTA
TAACAAAACCCTTTTTAATAAAAAGCACCATTTCTGTAGTTTAACACGCG
GAAGGAAGACTTTACAAACCTCTACTTGTTCAGCGTGAAAGTCGTAATGA
GTTTTTGTTGGTTGCTCTCCATGTGACAGTGGAGTGGCGACTATATTTTG
TCTGTTGTTGTTTTGTTGCTTCGAGGTTGCGTTGACCGATAGATTCTGTG
AACGAGAAATATCTCGAAGCATCATTTGCATCAGCTGCAATCCTCTTTTG
ATGGTTCGTGTGGTGTAAAGACCACGTTTCTGTGATCTCTTGCAAATTAA
CTTATAACGGCGTCTtgcaagaaaaagtttcttgcgGCGGTTGATTTGTT
GTTGAACGGTGGCTTTCCTGGCGCATATTCTTACGCCGCCAACACGCAAA
GGTACTTTGAAGATCTTCTGCTTCTTTTTTGTTGGTGCCAGTGATTTGTT
TTTTGAAACATCCGTTTGGTGCAAGCTTCTTTTACGATTTTTGGAGTGAT
TTGTATACATTTTTACCAAATAAAATTCGTTATAATACTTATGTAATAAC
TAAAGGACCAGGACATACAAAAAGCTGTATGCACTGACCAGGGTTTTAAT
CCAAAACTGAATCtccaaaatgattttgaaactgtgtaaatcaaaacaat
tatttgacgtcactttcttGATAACATTTGTTCTGACGTTAAAAAATGCA
CGCTGTTTTATTAGAGCGGTAAAAATTTAGAACGCCAACTGTTCTCGAGT
CTTGTACTCTTTGGATTACGGAATAAAATGCGATTCTTCATTAGTAAGTA
AGTAACTATTTATTAGGTAGGTTTAGACCGGATTCTTATACATCTCAACA
AACTCAAAACCACTCCCTCAGCTTGCCATAGATTATCCACTGTGTCACAA
ACCACGCTCTTtagcaaaaagaatcaaaacCGCGTCgctttttgctcaaa
aaatgaagaaaacaaaaacgaaagtgaacgtgaacgaaaacgaaagcgaa
tgtgaaagcgaaagcgactgtACATAATATGGACGCTGTAAATTTAGATC
TAGATTGTGTATCGTTTATTTCGAGACATTCTCTGTATGAATTTGATTAA
CATAATTTATttcatttgcatttttttgacagGTGGTTTGTTTGGATTCG
GGCGAGGCGCTTGGTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAG
ACAGCAAATGTTAGGTATGATATGgtttacgttttttttaatcCGATTTT
CTCCTCCTTTTAGCACTTTTGAGTTTCCGCCAAATTTCGAGTTCTCCTTA
GCTCGGATAAATTCGCAGACTTTCAGAGACTTCTTATATTTAACATTCAT
CCGCCATTCGGTTGAAGAAACTTCTAAAGCAATACCGCCCACTACCGCCC
ACCTGGGCAGATCCTTACGGGGCTTGCGAAGTAACTAGGATATTCTCGGA
GATTACCTTCGATGCGACTGCATTACCCGTTGGGTTCAACCATCTCcaat
tttttgagtttaaaactGGGACTGGACCACTGGAGTCGACAAGTCCCCAA
AAGGAAGGGACGGGTATAAGCCCGTTTTCGGAGTATTTCAGAAAATAAAT
AATCAGAAACCTTTTACGAAGAAAACTGTAATCTAGTTAAACCGGCTCAA
AGATTCTCAACCTCTCGCTTTCAGGTTACTTAGACAACGAGAAGGCAACA
ACAGAAACCATTTTGGAAGACGGTTGGCTACGCTCTGGTGATTTAGGTTA
CTATGACGACGAGAATAATTTATTTGTCATCGACCGTTTGAAAGAGTTGA
TCAAATATAAAGGTTTCCAGGTatactttgaaaatattttcgcaGCTCAC
AAAATGACTTTTTCAGCTCATCCGATAGAGAATTCGCTTTAAAACCGATC
TGCGATCACCGCAAACTCAGCGAATGAGTCGCCTGGATCAGATAATCTGA
TCTAAGCCCTAAGTTATTTAGAGCTGAGGGTAGTTGCGCTCCATCCCAAC
CCCTAATCTAGCGCAAAAATGAAAATGGCGGCAGACTCCGTCACTCCTGG
CTCCACCGATAAACTGACTTACTACTAACTCTTTGTATTCCAAAGAATTC
CTCATAGTTTAAGCTCCGAGCCAAAGGGAAATTCCTTAACGCGTTTTTCT
GGTGCAGAGAGTTTAACGCCGGTCAGGTACATACCAGTTTCACTAGATTT
CCATTGCTATAACATATTTGCAAATATTTGTTTCAAttccttttaaattt
tgattttaccaGAAAAGAGATTTCGAGTAAGTGAGTGACAAGGTTGTTGG
TCATTCCAAACagttaaacttttttgtttcccTCTAGGTTGTGCCTGTAA
CTTTTGCGGTTGCTGGATGAAAAAGCGAAATGGTCCACAGTGTTGTACAA
TATGttctgaaaaatcaaaaaaattcatagTTTCAATGTTTTTTCTGTTT
ATTTAGGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAA
CATTGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAA
TACCACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGAT
GAAGTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCG
TGGTGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAAC
TCCTTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAGCT
TGATTTCATGAGGGGTACTGTATATCACTTCGAAGAGAGCGTTATAGAAC
GGGGATTTCTTGAATTTCcgtgatttttctgtttgacatTTGGGATTCGG
GATTTTCGATTCTGTaacttttttagaatttttagatttaatCTTTGGAA
AAGTGCGTACCAGATATTTTTCAAGTAATTTACCCTCGGATATTTGAAAG
TACAAAACCATAAAACAGCATTTGTATTCTGACACGGTCTAAAAGTTGGG
TATACATCAAAACCCAATAGAGTT Coding sequence (CDS) from alignment at scaffold_407:272055..280278+ >TCONS_00064045 ID=TCONS_00064045|Name=TCONS_00064045|organism=Clytia hemisphaerica|type=CDS|length=8082bp|location=Sequence derived from alignment at scaffold_407:272055..280278+ (Clytia hemisphaerica) ATGCTCGGAGCGTTAGCAAACGGTATGGCGGTCACAACAGTCAACCCAGC CTATACTGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAG TTGTGATCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAA AACAGTTCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGA CAGCGGCGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATT TCTCAACTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATC TTATACTCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACA CCACGGCATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAA ACATGCCCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACgga ttaaattttattttgttgacaAATCTTTACCATGGTAACACCGTACACTC GTTACCAGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACA AGGTCAGTAGGATCCCGATAGTACCTCCAATTGCCTTATTCATGTTGAAC AACCCAATGGTGGCAAATTACGACTTATCGCACGTCAAATCTGTCATCGT AGGAGCGGCGCCAATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAAT TCCCAACCATGATTCTGCAACAAGGTTATGGTATGACAGAGAGCAACATT ACTCATCTTCAACCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGG TCAAACGTTTGCTGATACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCG AGGCGCTTGGTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAGACAG CAAATGTTAGGTTACTTAGACAACGAGAAGGCAACAACAGAAACCATTTT GGAAGACGGTTGGCTACGCTCTGGTGATTTAGGTTACTATGACGACGAGA ATAATTTATTTGTCATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGT TTCCAGGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAA CATTGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAA TACCACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGAT GAAGTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCG TGGTGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAAC TCCTTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAATG CTCGGAGCGTTAGCAAACGGTATGGCGGTCACAACAGTCAACCCAGCCTA TACTGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAGTTG TGATCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAAAAC AGTTCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGACAG CGGCGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATTTCT CAACTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATCTTA TACTCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACACCA CGGCATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAAACA TGCCCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACggatta aattttattttgttgacaAATCTTTACCATGGTAACACCGTACACTCGTT ACCAGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACAAGG TCAGTAGGATCCCGATAGTACCTCCAATTGCCTTATTCATGTTGAACAAC CCAATGGTGGCAAATTACGACTTATCGCACGTCAAATCTGTCATCGTAGG AGCGGCGCCAATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCC CAACCATGATTCTGCAACAAGGTTATGGTATGACAGAGAGCAACATTACT CATCTTCAACCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGGTCA AACGTTTGCTGATACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCGAGG CGCTTGGTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAGACAGCAA ATGTTAGGTTACTTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGA AGACGGTTGGCTACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATA ATTTATTTGTCATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTC CAGGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACAT TGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATAC CACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAA GTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGG TGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCC TTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAATGCTC GGAGCGTTAGCAAACGGTATGGCGGTCACAACAGTCAACCCAGCCTATAC TGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAGTTGTGA TCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAAAACAGT TCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGACAGCGG CGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATTTCTCAA CTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATCTTATAC TCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACACCACGG CATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAAACATGC CCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACggattaaat tttattttgttgacaAATCTTTACCATGGTAACACCGTACACTCGTTACC AGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACAAGGTCA GTAGGATCCCGATAGTACCTCCAATTGCCTTATTCATGTTGAACAACCCA ATGGTGGCAAATTACGACTTATCGCACGTCAAATCTGTCATCGTAGGAGC GGCGCCAATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAA CCATGATTCTGCAACAAGGTTATGGTATGACAGAGAGCAACATTACTCAT CTTCAACCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGGTCAAAC GTTTGCTGATACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGC TTGGTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAGACAGCAAATG TTAGGTTACTTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGA CGGTTGGCTACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATT TATTTGTCATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAG GTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACATTGT TGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATACCAC GCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAAGTG AAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGGTGG AGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCCTTC GTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAATGCTCGGA GCGTTAGCAAACGGTATGGCGGTCACAACAGTCAACCCAGCCTATACTGC CCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCA CGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCG ATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGACAGCGGCGT CGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATTTCTCAACTG ATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATCTTATACTCA AGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACACCACGGCAT GACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCA AAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACggattaaatttt attttgttgacaAATCTTTACCATGGTAACACCGTACACTCGTTACCAGG CTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACAAGGTCAGTA GGATCCCGATAGTACCTCCAATTGCCTTATTCATGTTGAACAACCCAATG GTGGCAAATTACGACTTATCGCACGTCAAATCTGTCATCGTAGGAGCGGC GCCAATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCA TGATTCTGCAACAAGGTTATGGTATGACAGAGAGCAACATTACTCATCTT CAACCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTT TGCTGATACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTG GTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTA GGTTACTTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGG TTGGCTACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTAT TTGTCATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTT GCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACATTGTTGA TAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATACCACGCG CCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAA GATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGGTGGAGT ACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCCTTCGTA GAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAATGCTCGGAGCG TTAGCAAACGGTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCA TGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGA CCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATA GAAACAATGATATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGT CAACATGTCGGATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATC TGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGC GGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGAC GAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAG ATATCTTAGCCGTTCTCCCTATGTATCACATCTACggattaaattttatt ttgttgacaAATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTT CGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACAAGGTCAGTAGGA TCCCGATAGTACCTCCAATTGCCTTATTCATGTTGAACAACCCAATGGTG GCAAATTACGACTTATCGCACGTCAAATCTGTCATCGTAGGAGCGGCGCC AATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGA TTCTGCAACAAGGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAA CCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGC TGATACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTC CTTACGAACAAGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGT TACTTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTG GCTACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTG TCATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTGCG CCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACATTGTTGATAG TTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATACCACGCGCCT ATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAAGAT TTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGGTGGAGTACA ATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCCTTCGTAGAG TGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAATGCTCGGAGCGTTA GCAAACGGTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCATGA GATGCACCATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGACCG CCCATTTATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATAGAA ACAATGATATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAA CATGTCGGATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTGT CAGCTATCGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGC ACAACAGGGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGACGAG TAACGTTTTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAGATA TCTTAGCCGTTCTCCCTATGTATCACATCTACggattaaattttattttg ttgacaAATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTTCGA CCCAGTGCAATTTTTATCCTGCATCCAAGACAACAAGGTCAGTAGGATCC CGATAGTACCTCCAATTGCCTTATTCATGTTGAACAACCCAATGGTGGCA AATTACGACTTATCGCACGTCAAATCTGTCATCGTAGGAGCGGCGCCAAT GGATGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGATTC TGCAACAAGGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCT AATGATGAATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGA TACTGAGTACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTCCTT ACGAACAAGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGTTAC TTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGCT ACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTCA TCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTGCGCCT GCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACATTGTTGATAGTTG CGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATACCACGCGCCTATA TCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTT GTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGGTGGAGTACAATT CGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCCTTCGTAGAGTGC TTAAAGATCAATATTTGGAGGAGAATGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00064045-exon-scaffold_407-1491911889:272055..272784 | TCONS_00064045-exon-scaffold_407-1491911889:272055..272784 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:272055..272784 | TCONS_00064045-exon-scaffold_407-1510915933:272055..272784 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:272055..272784 | TCONS_00064045-exon-scaffold_407-1575043694:272055..272784 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1491911889:273267..273438 | TCONS_00064045-exon-scaffold_407-1491911889:273267..273438 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:273267..273438 | TCONS_00064045-exon-scaffold_407-1510915933:273267..273438 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:273267..273438 | TCONS_00064045-exon-scaffold_407-1575043694:273267..273438 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1491911889:273706..273809 | TCONS_00064045-exon-scaffold_407-1491911889:273706..273809 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:273706..273809 | TCONS_00064045-exon-scaffold_407-1510915933:273706..273809 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:273706..273809 | TCONS_00064045-exon-scaffold_407-1575043694:273706..273809 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1491911889:278387..278468 | TCONS_00064045-exon-scaffold_407-1491911889:278387..278468 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:278387..278468 | TCONS_00064045-exon-scaffold_407-1510915933:278387..278468 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:278387..278468 | TCONS_00064045-exon-scaffold_407-1575043694:278387..278468 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1491911889:278929..279074 | TCONS_00064045-exon-scaffold_407-1491911889:278929..279074 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:278929..279074 | TCONS_00064045-exon-scaffold_407-1510915933:278929..279074 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:278929..279074 | TCONS_00064045-exon-scaffold_407-1575043694:278929..279074 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1491911889:279711..280278 | TCONS_00064045-exon-scaffold_407-1491911889:279711..280278 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1510915933:279711..280278 | TCONS_00064045-exon-scaffold_407-1510915933:279711..280278 | Clytia hemisphaerica | exon |
TCONS_00064045-exon-scaffold_407-1575043694:279711..280278 | TCONS_00064045-exon-scaffold_407-1575043694:279711..280278 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_407 | supercontig | scaffold_407:272055..280278 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0008152 |
metabolic process |
molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00064045 vs. Swiss-Prot (Human)
Match: ACSF2 (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 8.596e-41 Identity = 134/516 (25.97%), Postives = 235/516 (45.54%), Query Frame = 2
Query: 53 ELTFSEIIKNSRQLGSFFHQKNLKINERVCLHLPNCIEYSYSMLGALANGMAVTTVNPAYTAHEMHHQVKTSTPKVVI-----TTAHLLDTARQAS---ENS---SIETMICLDDTSISD-----SGVVNMSDVLQNGDENFSTD--------LSAIDPEKDIAFILYSSGTTGLPKGVMIEHHGMT--SNVLQIRDFFGENMPKDILAVLP--MYHIYG-LNFILLTNLYHGNTVHSLPGFDPVQFLSCIQDNKVSRIPIVPPIALFMLNNPMVANYDLSHVKSVIVGAAPMDEEATKAFRRKFPTMILQQGYGMTESN---ITHLQPNDESLHKAGSCGQTFADTEYKVVCLDSGEALGPYEQGEVYTRGRQQMLGYLDNEKATTETILEDGWLRSGDLGYYDDENNLFVIDRLKELIKYKGFQVAPAELEDLLISHENIVDSCVIGVPCERAGEIPRAYIVKKPGSDLTEDEVKDFVGERFSDHKHLRGGVQFVEQLPKSASGKLLRRVLKDQ 1504
LTF+++ + + S L +R+ + PN + L G+ + +VNPAY A E+ + +K K ++ T + +Q EN+ ++++ D T++ G + + +V+ G D LS DP I ++SGTTG PKG + H+ + SN+L R E P+ + +LP +YH G + ++ +Y + + P F+ + L I + + + P + + +LN P ++YD+S + ++ +P E +A K L YG TE++ H P D KA S G+ TE +++ +++G GE+ RG MLGY + T E + +D W +GD+ +++ ++ R K++I G + PAELED +H + + V+GV +R GE A I K G + T +E+K F + S H + + FV P + SGK+ + L++Q
Sbjct: 99 RLTFAQLKEEVDKAASGLLSIGLCKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPIN----IQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAHF-PEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFCKGKIS-HFKIPKYIVFVTNYPLTISGKIQKFKLREQ 608
The following BLAST results are available for this feature:
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