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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064008 ID=TCONS_00064008|Name=TCONS_00064008|organism=Clytia hemisphaerica|type=transcript|length=892bp
gaatttggaatGCGTATATATTGGTGACATAggtgtactggagccttatt
cgGGTGCTGGCCTAACAGACGAATAAGACACAGTGGGTGGGTGAGTCCGG
GCTACGGAAGGGGCGCGCTCAGAAACCTGGGGGAGTAGAGCCTAATCCTA
CTGTAGACAAGAACGGGACACTATGCAGTTACAATAAAACTAATATTTAA
TAATGACAACGCTCTACAATCGTGCTACAAATAGGAAAAGGATACTTACA
ACCCTATGTCCTGAGCAGGTCCGCCGCCGATCGCTGCCGAAACAACACTA
AAGTTTAGGAGGGCTGGACAGCAATTGCTAAGCTGCTGCCCAGTGGAGCG
TGGAAGACGCAGTTGGGCGTTAGAAGGGCGCTAGATACGATCAGCAAAGG
TATAGCCGAAGGAACTTTAGTACATTCCTCCGACCTTAAATGGCTACGTG
GGGTCGCGTTTTCTTTGGAGGCGTTGCCTGCTCAGGGGTGActaataaaa
taacaaaaataataaaaatttcctAATCTTGACACTTCTTCCATCTTGCT
GCTTGGAGGGATTGGAGATTGGTCGGGGGTAGCCACTCTTCAGGACAGGT
CTTGTACTTCTCAGCTTTTGGTGGATGGATCATCTTCTGCATTCCTTAGG
ATACTTTCTGGAGTACTTGAATGGTGGCAACGGAAGCAGCAGGTTCCACT
AACACTGGTGGCTTGATGATAGGGGATGACTGGTTTAGTGGTGTCATCCC
CAGCTGCCTGTGGTGGTGGTTTAGCAGGCGTTACAAATGATTcatgtttt
tggttttgatgttatttGGTGTGTCTTCTCAGTCACCAGTCTCTTTGAAT
TTCTCATTTGGTGGTCATATCTAGTAGGTCAGCAGATTCAGG Run BLAST on NCBI transcript from alignment at scaffold_405:13000..13891 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064008 ID=TCONS_00064008|Name=TCONS_00064008|organism=Clytia hemisphaerica|type=transcript|length=892bp|location=Sequence derived from alignment at scaffold_405:13000..13891 (Clytia hemisphaerica)
CCTGAATCTGCTGACCTACTAGATATGACCACCAAATGAGAAATTCAAAG
AGACTGGTGACTGAGAAGACACACCaaataacatcaaaaccaaaaacatg
AATCATTTGTAACGCCTGCTAAACCACCACCACAGGCAGCTGGGGATGAC
ACCACTAAACCAGTCATCCCCTATCATCAAGCCACCAGTGTTAGTGGAAC
CTGCTGCTTCCGTTGCCACCATTCAAGTACTCCAGAAAGTATCCTAAGGA
ATGCAGAAGATGATCCATCCACCAAAAGCTGAGAAGTACAAGACCTGTCC
TGAAGAGTGGCTACCCCCGACCAATCTCCAATCCCTCCAAGCAGCAAGAT
GGAAGAAGTGTCAAGATTaggaaatttttattatttttgttattttatta
gTCACCCCTGAGCAGGCAACGCCTCCAAAGAAAACGCGACCCCACGTAGC
CATTTAAGGTCGGAGGAATGTACTAAAGTTCCTTCGGCTATACCTTTGCT
GATCGTATCTAGCGCCCTTCTAACGCCCAACTGCGTCTTCCACGCTCCAC
TGGGCAGCAGCTTAGCAATTGCTGTCCAGCCCTCCTAAACTTTAGTGTTG
TTTCGGCAGCGATCGGCGGCGGACCTGCTCAGGACATAGGGTTGTAAGTA
TCCTTTTCCTATTTGTAGCACGATTGTAGAGCGTTGTCATTATTAAATAT
TAGTTTTATTGTAACTGCATAGTGTCCCGTTCTTGTCTACAGTAGGATTA
GGCTCTACTCCCCCAGGTTTCTGAGCGCGCCCCTTCCGTAGCCCGGACTC
ACCCACCCACTGTGTCTTATTCGTCTGTTAGGCCAGCACCcgaataaggc
tccagtacaccTATGTCACCAATATATACGCattccaaattc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064008-exon-scaffold_405-1491911889:13000..13891 | TCONS_00064008-exon-scaffold_405-1491911889:13000..13891 | Clytia hemisphaerica | exon |
| TCONS_00064008-exon-scaffold_405-1510915933:13000..13891 | TCONS_00064008-exon-scaffold_405-1510915933:13000..13891 | Clytia hemisphaerica | exon |
| TCONS_00064008-exon-scaffold_405-1575043694:13000..13891 | TCONS_00064008-exon-scaffold_405-1575043694:13000..13891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_405 | supercontig | scaffold_405:13000..13891 . |
Blast
The following BLAST results are available for this feature:
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