TCONS_00063923 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063923
Unique NameTCONS_00063923
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063923 ID=TCONS_00063923|Name=TCONS_00063923|organism=Clytia hemisphaerica|type=transcript|length=1160bp
TGTGATCGATAACAATGGTTTGGTTCTTATTCATCCAGCGATCAATGGTA
AAAAGTTAGCTCGATTGAATCCTCAACCAAATATGGCGATCGAGGAGTTG
GAATTTGCTGTCCATAATCACAGTCATGTTAAACAGtTACGCGTTCGAAG
GATTGCTGCAACTTATCATTTTTTCAGATCTACCAAAAGTCCTTTCAGCA
CTGGCATCGCATCTCCCAAGTTTGGTTTCTTCGTCCAAAGTCCAAACATC
ACTTTAAAAGAagGTTTGAAGTACCTGAAAAATGTTTCCGACATAATGCA
CTGGCCATTCTGTCCAAAACTTCGACGATTGAAGGATACAAAAACTGTGA
TGGTTCAACGTAttgctgaaaatgaaaacaaaacacaCCTCGACACGTGC
AACCATCGAATGGTACACGGTTTATTGTTGGATGCAAAAGCCACAAGTCA
ATtaccaaaacaatggaaatctAAAAGGGAGAAAATTGAAGAGAATGGGA
TCAATCATATTTTCATTCGAACGCATTGGGGAGTTATACAAAGTATCAAG
AGGAAAAATAATAGcGAACTTATTGACGGTGGCTTTGAGAGCATTTCACG
CGAAAGTTACGATCCTTTTGATTTTTACAAACGAGCCAATCACATTCCAA
ATCGGCTAACCATCTCTTTGATAAAAGGAAGAGGAGAAGATGATCACGTG
ATATCAATTCATAATCCGATTCTTCAAAAGAAAGCAGGTATCACTTTAGC
AGTCACTGGTGTAGAAATGTCTTACGAAAAATTTATGACGActaatttca
ttgaaaaaacaaaagagtTCCCTGATGAACATCTTTATGATGGCAGATTG
ACTTGTGATCGTCATTTGAAGAATCAGGTGGAGGGTTTATATTGTTATCT
GTTGGATGAAAATGGTTTCGTTGTCGCCTCAAACGAAGAAGCAGACATTG
GGTTATTTTTCGGAGAAGTTGATCAAAATGTGATGCGAAAATTGATCGAG
GAAGATAAGTCACACTCCCTCTATCAAGTGGTTACGCTACCAGACTATCA
AGCTTCGTGTAAATTACCGACAAATAATGACAGTAGCGCAGCTGAACTGA
AAAATattttcacttGGATTATTTCTttgttagtttcattacttcaAACC
AGTTTATTTT
Run BLAST on NCBI

transcript from alignment at scaffold_404:121636..132708-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063923 ID=TCONS_00063923|Name=TCONS_00063923|organism=Clytia hemisphaerica|type=transcript|length=11073bp|location=Sequence derived from alignment at scaffold_404:121636..132708- (Clytia hemisphaerica)
TGTGATCGATAACAATGGTTTGGTTCTTATTCATCCAGCGATCAATGGTA AAAAGGTAAAGTTTACTTGATAACAGCCTTGTTTTATAGTCCCGGTAGAA CTTTTTTCCTCAGTGGTGGGAATAAAAACTTATTGAAAAATCAATGGGAA TAGAAATGATATTGTTTCAAGTTTTAAAAATGCAGTGGGAATGGTTTTGG AGTGCAAGTTTTAATTATTGAATTTCGAATGGGGATAAAATCTAAGTCAA TTTTCTAGTGGAGCTTAAATTTCAGGGTATTTGCCTACCGGATCCCAAAT CTTTGCCAAATTTTCCTGTGGGGCTGGGGTCTCAGCAGGTCTGTGAGACA GGGGTGTTTGATTCAAGCATTTTTATTGTTGGGCCTGAAAAGATGACAAA GCTAAGGTGACAATTTTAAGTCCTCCTAAGGATTATAGAAGAACTAAAAT CAAACTTTCCAGCAGGTTGAATTTCTTGAAAAAGAATGACAATAAAAGTT CCAAAATTCCCCAAATTGCAATTTTTCGCTCATGAATTTCAGACCACCTT CAAAGCACCTGTAAATATTAATATCGCCAGTATTCTCTGACTAGTAATAT AGAAATATGTTTCCCTATATCAACACAACAATTTTACACTTTTAGTTTGA AATTTACAATAAACATCAGGACTTCTTCATGCATAACCAAAGTTTACAGA GTTGAATATCTCTATAATCAAGATAAAGCTTATTTTTCTTACAGTTAGCT CGATTGAATCCTCAACCAAATATGGCGATCGAGGAGTTGGAATTTGCTGT CCATAATCACAGTCATGTTAAACAGGTAATTTAAACGAACGTTCTTCTAC AGCATGCAATATAATGCACTGTGTCTACAAGCAAACCGTGTGTGGGGCAC TAAATGACCTTTTAGGGTCTATTTTCAAGGTCAACATAGCATTTCCATTC ACACACTGGCCATATGATCACATCCACACTGTAGATGTTTTGCCAGGCTG CGTATACATAGAGAGATCCGTTGAAAAACTTTTTTGCACCACTTTCTAAA TCTACCTAAACTAGTGTTATAGGTCAGTGATCCGATGAAAACCTAATTCC AATGGGTTAATTAGTTTTTTCAAATGAAAATCCAGTTGGGATTCTAAAAA AAAGCGTCTTTTCCATTGGGAATAGGAAGGTCTATAGGCCTAATCAACAG TTTTACACATGACATCTTTTGAACCCAATAATCCACTGAGGCGGTCCACT ATTATTTTTTTCAATTTCTGACCAAAATATATTAGGGATAATCATGGAAG TGTATCAAACATATTCTATTTATCAGTTACACAGGGAAATGATCTTGATG AATCCAGGTACTCCAAAGCAACTAAAGTTCGATGTTTACATCAAATCAAA AGATGAGGTTTGTATTAAAAGATTACTCTATCTGCTACAAGAGAATTGGT CGAAGTTTTACACTGAACACGTGGACAAAATTCTAAACAAGCTGTATAAC AATCTCCAATAGAACTACCAAAAAAGCCCCGTCGAAAGGACGATGACACC CCTGTCTCAGTGCCCTGGTAGAACTTTTTCTCTCAGTGGGGATTTCTATC AAAATACCAATGGGGATAGAAAATCTATTGTTTCCAGCTCGAAAATTCCA GTGGGGATGGTTTTGGAGTGCAATTTTTTACATTCAGTTTTCAATGGGGA CAAAACCATAGAGCAATTTCGCAGTGGGGTTGAAATTGTAGGATATTTTT TCCAAAGGGGAAGATTTTTTGGCCTATTTTTCCACTAGGTCTGTGACACA GGAACACAGGGGTGTACGATGGGAACACATTTGTGACAATTTGTGAAAAT CGAAAAGAGGTGCTGTTTAAGGTCGAAAAAAGGGGGGGATTAAGTAATCG TTTTGTTGATAGTACCGAGAAGTTTTCTTAGCCTTCGTAGGTTGGGGGAC TAGGTTTGACTTAAAAAAGGCAAAATTACCAAAATAGACCTCTGGCACTT TTTTTCCCATTCGTGCATCGATTGGGCTTTTTTTCTGACGGTTTAGTACC TTAAAAGCTACTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGATCGTTATGCTCAATA TATCATGATTTTGGACAATGCTAAAATCGGGGTCGCCATAAAGAAGTATT CTACACAATGTTTTGGGATTAAATGGAAACAAGATTATGTCAAGTTGAAG AAGGCTGTCGAACATCACAAGTCTGTCGTTAGAGTAATCAGAGCAATGCA TCAGAAAATGTTGCGTTGTTTCTACTGAATTACAGAAGGGGTCAACTGTG TCTGAACTTACGCTCACGAAGATGACTGAAACCAACCCTTAATCGGTTAA GGAGAACAACGCCATCGTTGTCACTAGCTCTGAAAACTGAGTTAGCACTG GGTCTGAGGAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAATAGCTT GCTTGAAAGACTTAATAGTGGGAAGATTTCGTATATGATCTCCGAGGTTA TTCCATTCATTTATGCAAAATGGAAAGAAAGAAGCACGATAACGTTCGGT TCTACAGAAAGGTACCTCAAGTGGTGGTTTTATCCTTCGCCATGCATTGC GCTCTTCCTCTCCTCTCTGGGAGGAAGAATATTCGTAAGATAAGCAGGAG CAAAGCCTTTTATGATTTTATAAAAAAATACGAGTCTTCTAATTAATCGC CTGTCTGCCAGGCTTTCAAAGCCTAACTCAAGGTAAATTTCTTCTCTGGA AAGCTACTTATTTACAATGCTTGGGTTTGTTGGGAATTTTTTCAATGTAA AATGATATTTCCACTTGACTATAGTAAATATCAGTTTTGAAAAAACCCTG TCACAAAATCTGTTCCACTGTTCACCTGACAAAGCACACAAAAAAGATAA ATGACTTAGAGAAATAATGTGAGAAAGACCTGCTTGTGCAAAAGACAAAG GATCCTAACTAGAACTTGCTAAAAATCTTATTTCAAAACTATCTTTCGTC AACTGTAGAAAAAGCCAAGAAACACAGAGTTAAACACAAGACTTTTATAG TTTTGTTTTTGATTTGAATCAACCCAACATTTGACGTATATTTTAGATCA ATTTGTTTTTATTTATAATATACGTGCATTTTACAGAGATTGTATACGAT TTGAAATTTGTTTTTCAGTTACGCGTTCGAAGGATTGCTGCAACTTATCA TTTTTTCAGATCTACCAAAAGTCCTTTCAGGTAAGGAACGACCTCTATGT GCAAAAACTTTGACATTTTCTATAACAGGGAATGTTAATCGAAGCCAATC ATATTCAATCTTCCATCAGTGAATCGAAAATTGATTATTCGAAGTCAATC TAAGTCTCATAGAAAATCGAATCTAATCAAGCGCAATCGAAACCAGTCAA CCAAAGCTTATTGGAATCGAATAGATTCTGTTGACTGTGGTTTCGATTGA GCTTGATTAGATTCGATTAAAAGTAGCGTACCGAGAACGGAGATTTTTTG TTCGTCGTTAGCGTAAAAGACTTTCCTACGAAACCAAAGTCGATGGAATT TGATAGAATCTTTTGAAGTATGTCGAAAGAAATGTAAATCATATATCGAA TTTAATCAATTCAACCAATTACTTCATCACTTATTCGATCTATCTGAAAG ATTCGATAATCCATTTCTCCGATCTACACCACCTGGTTCTAACGACATAT TATACAGTATTCAAAAGCTAAATGAAAAGTCTCGCTTTCAGCACTGGCAT CGCATCTCCCAAGTTTGGTTTCTTCGTCCAAAGTCCAAACATCACTTTAA AAGAAGGTAATTTCAAAAAAATTTATGAACACAATGACGATTCACAACTC GATGCATTAACCCAGTACATGCTGTGGGAAATTTTTGTCAAAAGCTAAAG TCTATTCACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTATCTTTCCAATGATACCAAATTTATAAAGAT TGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCACACTT ATCGTGAATAGACTTTAATTTCCCTGAAATTTCATAATTGGTATTGTTGG TGTGTATTTAAAATCAAACTAAAACGATCCTTTTTTTGATTTTGAATTCA CTCACGGTAGTTTTTACCCTTTACGATTTTTCTACCTATAGGTTTGAAGT ACCTGAAAAATGTTTCCGACATAATGCACTGGTAAATGTATTTCATTTTT AACTGTTAAAGAATTTAGTATGAGACAAAAAAAAATTTACATGTCAGAAC TGTTGGCAAAACAGATGGCGAAAACCCTCTCAGATACTTATTTTATCAAA AACATTTAAAAAGTCTTTTAAGATATTCTAATCATGTAAAATTGTCCAGT TGGCCCACAACGTTGTTTTGACGTTAATCTAATTTCCATATAATTGAACG TTCAAAAATGTTGTGTGCATAGATGTACAAATTAAGTTTTTTGACAAACC TGTATTACTATACAGGTTACACTTCTATTAACGGTCCAAAGAAATGATAT AAATTTTATCAAAATTTGATATTTGTATTTAGCTCCTACTCTCTAACAGG GTCATTGAAACAGGGGTTATCACCTCACAGTTCCATCTTTAAATCTTGCC CTAATCAAATTAATGTAACTGTTTGCATATTACTTTTTGCTCAGGCCATT CTGTCCAAAACTTCGACGATTGAAGGATACAAAAACTGTGATGGTTCAAC GTATTGCTGAAAATGAAAACAAAACACACCTCGACACGTGTAAGCCAAAA CTACCATTTGAAAGAGTAACTATTTGTAATTCAAACGTTTGTAACGTGTC ATTTTCCTCATAGCACAAAATATTCTACTTTAATGTTCATACTCACTCAG ACGTTGAAAGAAATAAGGAATGTCGCCCTTTAAAGTGTGTTTTGGTAGAC ATAAAATTTGAAGGGTCAATTTTTGCCAATTTTCAAAAAGATTGGATCGG AACAGAAATTTTGTCAGATAAAAAGATAAAAGTGATATATTATACCCTTT TTGACTTTTAACACAGGCAACCATCGAATGGTACACGGTTTATTGTTGGA TGCAAAAGCCACAAGTCAATTACCAAAACAATGGAAATCTAAAAGGGAGA AAATTGAAGAGTAAGATTCCACATTGTAGCTTTTCCCAGGTTATCTACTA GCAAAGGAGGTTTTTTAGGTAAAATGGTAGAACTGGGATCTACTTTTTAA GGGGGATTCTTCTGCGTCCTGTTGAAGATCATGGATAGCACAAAACTAAA ATCTGACCACGTAAGAGCCAGTTCTAGAATACAAAAATTGAGATAGATGT AAAAATAAATAAGTGCAAATAAATTTACTCTAGTTTGGAGGAGCTGTGAG AATCATAGTTTAGCTTTAGAAATTTAACCTATGAGGACGGACGGACAGAA TCTTATCGCGTATGTCTCATTCACGTTATTTTTTAAAGGGGAGAGCACTT ATCTTTACGTTAAACTTGAAAAGATTACATATATTTATATTCATCTCATC ATTCTATGTTTGTTATTTATAAATTTGATTGGTTCAGTCTTCATCCAATA TCCTGGATGATTGCTATGGCTTCTTTTGTTCTCACTGAACGCACGCTGAA TTAGAATCGCTATCTTCCCTACCAGTGTTTTGTCCATACATTGTGATACT TACGGTAACACGCCTGTCTCACAGCCCCGGTGAAACTTTTTCCTATAGCG AGGGTAAAATTTTCTATCGAAAACCCAATTTGGAGAAAAATTCTATTGTT CCTAAGTGGAAAAATCTTCTTGGGATAGTTCTGGAGTGCAATTTTTTGCA TTGAATTTTGGATTGGGATGAAATCAAAGCCAATTCGCAGTGAGATTGAA ATTGTACGGTATTCTTCCACCGGGGACGAAATTTTGGTCAAATTTTCCAG TGAGGGTGGGGTTCGGCGGGTCTGTGACACAGGGGTGTACGATAGTTCTT TAATATTCTAGGAATGGGATCAATCATATTTTCATTCGAACGCATTGGGG AGTTATACAAAGTATCAAGAGGAAAAATAATAGGTAATGAGTACACATTT TTGTTATTCTTTAAGAATTAGATTATTATCAAGGTTTCCAGATGTGCTTT TTGTCTCAAACAAAAAATCCTTTGAGATTGAATGATTTTTGAGAGAACTT TATTAAGGAATAAATTTTGAAGGTAAGAAAGTTTGATGCAAACGAGACCC CCGTGCCTCAGTGTGATTCTTTACAAGCAAAACTCAAAGCAAATTATCAA TGAAGAACAATAAAGAACATTGCTGTTTGGCGTTAACCCTTTAAGTGCCA ATGTCGAGTATAATAAAAAGCCTTTAAAGTTTAAATTAGCGATTTTATTT AAAAACTTAGAAAAAAAGGACCGTGGAGACTTTAAAGGGTTAAAGTCAGG TGTGATACTTTCAATTTTTTTAATAGCGAACTTATTGACGGTGGCTTTGA GAGCATTTCACGCGAAAGTTACGATCCTTTTGATTTTTACAAACGAGCCA ATCACATTCCAAATCGGCTAACCATCTCTTTGATAAAAGGTAGGATATGA TAGTTCAAAGCCAGTTTTTGAAAGTCCAACAACGTCCTAAATCACCCTAT AAAAGTTTTCCATCCTCCCAGTTATTATAACTTATGATAAATATTGCATG TAGAGTATAGAGATAGACAAAAGTATATCTAGGTCTTCTTTCGGATTAAC CTCACAAAACCTTATAGAAAACCCCTAGTAGCAGGATCAACTGAAAAAAC ACATCGCATAGAAGTTCACGTTGTTTTTCAACAACCAATAGGAAGAGGAG AAGATGATCACGTGATATCAATTCATAATCCGATTCTTCAAAAGAAAGCA GGTATCACTTTAGCAGGTAATTCATCCGAAAGGAGTCTTTCCCAAAGCTC TATTCTAAGCACTGCCTTTCGATCACTGCGTTTTATCAACAAACTACGCC CGTTACTGTGTTTTTGTAGACATTGACAGACATTCAATCATATCCCAGCG AAAATAAATACGTATCTTTTGATGACAAAAAAAAGAAAATCCTAAACATT GTCGTTGTTCGATTGATGGTTAGGTTAGAGATTCNAAAAAAAAAGAAAAT CCTATACACCGTCGTTGCTCGATTGATGGTTAGGTTGAAGATTTGAAATC TTTTTTAAATTTTCATTCTTTCCAGTCACTGGTGTAGAAATGTCTTACGA AAAATTTATGACGACTAATTTCATTGAAAAAACAAAAGAGTTCCCTGATG AACATCTTTATGATGGCAGATTGACTTGTGATCGTCATTTGAAGAATCAG GTATTGTCACTTCTTCTTTCTTTCTTTAAAGAAACCCCTAGTGGTTTGCG TGATTTTTTGCTGGCGTGTTGAAGTGGTCTCGATTTTTTGGTGTGCGATG GTGTGATCAAAATTTTGACAGTATGCGTGAAAGGACAAAGTTTATAAAAT ATCTCAGGAATCCAAACACAAATCATAGTAAATCAGAGTAAATAGGGGTC AGAGCTTTTAGATTTTGCCAAAGTTTGCTTATTTGTAGTTTCAAAAATCA CAAAATGACAAGAAAACCTTTACTAAAGGATCAGACCGTATGTTTTTTTT GATCGATATTTTTTGACAGGTGGAGGGTTTATATTGTTATCTGTTGGATG AAAATGGTTTCGTTGTCGCCTCAAACGAAGAAGCAGACGTAAGATTGCTA ATTTCTTTACAGTGACCAGCTATAAGTAGCAAGAATAGGTTGAAAGGGAG AACCACAAATCTTTTTTGTAACAACAATTGATCTCCTGACTTTCTTTAAC AGATTGGGTTATTTTTCGGAGAAGTTGATCAAAATGTGATGCGAAAATTG ATCGAGGAAGATAAGTCACACTCCCTCTATCAAGTGTAAGAACTGGTCTA AATTTTCGGGAGACTCTTTTACGGAGTCATTTAATCTTTTTTTCTACCGG TATGCCGGTATTTGAAAGTGAAATTACCAGTACTCCGTTATTTGAGATGT CTACTTATTGTATCGCTGTTTACATAAAGATTTACCAGGATTTAAATTAC CTACCAGTACTTGTATTTCGGCATCAGCATTCCAAAGAAGTCACGAAGAA ATTTTGAATTTGGATTTCAAAAAAAAACTGTCAGTACCGCTGAATTATTC CACCGGTAATCCGGTACGTCGCTATTTGGCGATTTCAACAGAGGTTTTTC CTGTACCGGTATTTTAGAAATTTATTACCAGAATTTTGGTATTTCTACCC TCAGAAGCTCCCTTCTTTACTTTGTAAGTCTGCTTGCTTCAATTTATAAT GAGAACAATTTTTACCCAAGAGCTACATATTTCTTAAAAATCTTACTTAT GCCTGAAAAAAATATTTGTTTTGGATGCATTTTTACTTTGGAGTATGCTT TACAATATCATTTCAGGGTTACGCTACCAGACTATCAAGCTTCGTGTAAA TTACCGACAAATAATGACAGTAGCGCAGCTGAACTGAAAAATGTAAGTTT CTTCTCGTTAAATCTACAAAGATACAACATCTAATCTACTCCAAGCTTGA AAATAACATAGCTAGAAGAGCATTCAACTCAAAAATCCCTTCTCATATTT CTCTGGTTATTTCAACTAACCAGGCTGTTGTTTTAACTTTGAAACTGATT ACAAGCGATGCAAACTGTAATCTGTTAAAATTGGCATAGTGATATTTATT GATAACAGCATTACCAAGGTTGAAATATTATAATCAATAACAACCATAAA CAATGGATTTTTTTTCAGATTTTCACTTGGATTATTTCTTTGTTAGTTTC ATTACTTCAAACCAGTTTATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040066XLOC_040066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063923-exon-scaffold_404-1575043694:132654..132708TCONS_00063923-exon-scaffold_404-1575043694:132654..132708Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:131884..131964TCONS_00063923-exon-scaffold_404-1575043694:131884..131964Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:128279..128340TCONS_00063923-exon-scaffold_404-1575043694:128279..128340Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:127703..127767TCONS_00063923-exon-scaffold_404-1575043694:127703..127767Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:126278..126317TCONS_00063923-exon-scaffold_404-1575043694:126278..126317Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:125720..125814TCONS_00063923-exon-scaffold_404-1575043694:125720..125814Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:125349..125442TCONS_00063923-exon-scaffold_404-1575043694:125349..125442Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:124426..124497TCONS_00063923-exon-scaffold_404-1575043694:124426..124497Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:123920..124032TCONS_00063923-exon-scaffold_404-1575043694:123920..124032Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:123593..123667TCONS_00063923-exon-scaffold_404-1575043694:123593..123667Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:123159..123283TCONS_00063923-exon-scaffold_404-1575043694:123159..123283Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:122771..122839TCONS_00063923-exon-scaffold_404-1575043694:122771..122839Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:122574..122656TCONS_00063923-exon-scaffold_404-1575043694:122574..122656Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:121967..122042TCONS_00063923-exon-scaffold_404-1575043694:121967..122042Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1575043694:121636..121690TCONS_00063923-exon-scaffold_404-1575043694:121636..121690Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:132654..132708TCONS_00063923-exon-scaffold_404-1510915933:132654..132708Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:131884..131964TCONS_00063923-exon-scaffold_404-1510915933:131884..131964Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:128279..128340TCONS_00063923-exon-scaffold_404-1510915933:128279..128340Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:127703..127767TCONS_00063923-exon-scaffold_404-1510915933:127703..127767Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:126278..126317TCONS_00063923-exon-scaffold_404-1510915933:126278..126317Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:125720..125814TCONS_00063923-exon-scaffold_404-1510915933:125720..125814Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:125349..125442TCONS_00063923-exon-scaffold_404-1510915933:125349..125442Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:124426..124497TCONS_00063923-exon-scaffold_404-1510915933:124426..124497Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:123920..124032TCONS_00063923-exon-scaffold_404-1510915933:123920..124032Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:123593..123667TCONS_00063923-exon-scaffold_404-1510915933:123593..123667Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:123159..123283TCONS_00063923-exon-scaffold_404-1510915933:123159..123283Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:122771..122839TCONS_00063923-exon-scaffold_404-1510915933:122771..122839Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:122574..122656TCONS_00063923-exon-scaffold_404-1510915933:122574..122656Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:121967..122042TCONS_00063923-exon-scaffold_404-1510915933:121967..122042Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1510915933:121636..121690TCONS_00063923-exon-scaffold_404-1510915933:121636..121690Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:132654..132708TCONS_00063923-exon-scaffold_404-1491911889:132654..132708Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:131884..131964TCONS_00063923-exon-scaffold_404-1491911889:131884..131964Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:128279..128340TCONS_00063923-exon-scaffold_404-1491911889:128279..128340Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:127703..127767TCONS_00063923-exon-scaffold_404-1491911889:127703..127767Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:126278..126317TCONS_00063923-exon-scaffold_404-1491911889:126278..126317Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:125720..125814TCONS_00063923-exon-scaffold_404-1491911889:125720..125814Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:125349..125442TCONS_00063923-exon-scaffold_404-1491911889:125349..125442Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:124426..124497TCONS_00063923-exon-scaffold_404-1491911889:124426..124497Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:123920..124032TCONS_00063923-exon-scaffold_404-1491911889:123920..124032Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:123593..123667TCONS_00063923-exon-scaffold_404-1491911889:123593..123667Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:123159..123283TCONS_00063923-exon-scaffold_404-1491911889:123159..123283Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:122771..122839TCONS_00063923-exon-scaffold_404-1491911889:122771..122839Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:122574..122656TCONS_00063923-exon-scaffold_404-1491911889:122574..122656Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:121967..122042TCONS_00063923-exon-scaffold_404-1491911889:121967..122042Clytia hemisphaericaexon
TCONS_00063923-exon-scaffold_404-1491911889:121636..121690TCONS_00063923-exon-scaffold_404-1491911889:121636..121690Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:121636..132708 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0373057 0.036379 0 0 0 0 0 0.0898036 0 0.0530538 0.0911171 0 0.0137889 0 0.0359447 0.0158411 0 0.0543381 0.503875 0 0 0 0.446185 0 0.945129 0.758656 0 0.56985 0 0.089909
Blast
BLAST of TCONS_00063923 vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.203e-22
Identity = 109/436 (25.00%), Postives = 184/436 (42.20%), Query Frame = 2
Query:    2 VIDNNGLVLIHPAI-----NGKKLARLNPQPNMAIEELE-------------------FAVHNHSHV-KQLRVRRIAATYHFFRSTKSPFSTGIA-SPKFGFFVQSPNITLKEGLKYLK--NVSDIMHWPFC-----PKLRRLKDTKTVMVQRIAENENKTHLDTCNHRMVHGLLLDAKATSQLPKQWKSKREKIEEN---GINHIFIRTHWGV------IQSIKRKNNSELIDGGFESISRESYDPFDFYKRANHIPNRLTISLIKGRG--EDDHVISIHNPI--LQKKAGITLAVTGVEMSYEKFMTTNFIEKTKEFPDEHLYDGR--LTCDRHLKNQVEGLYCYLLDENGFVVASNEEADIGLFFGEVDQNVMRKLIEEDKSHSLYQVVTLPDYQASCKLPTNNDSSAAELKNIFT-------WIISLLVSLL 1144
             I NNG +L HP +      GKK  + N   ++ + E+E                   F++     V K  RV  +   Y++     +PFS G+A S   G +    N+T++EGL  L+  +VS    W +C     P+ R L   + + +      + K  L  C+  ++  +L DA  ++ +   W S      EN   G+   F+ T  G+      + + +  N   L  G  E+I    + P  + + A  IP     S+    G     +V++    I  L ++    +A  G++M  E F    F   +++       DG+  ++CD    N      CYL+D NGF++ S +    G FFGE++  VM KL+    +   ++ +TL DYQA C+    +   A  L + +        WI++ LV  L
Sbjct:  526 AITNNGYILTHPELRLLYEEGKKRRKPN-YSSVDLSEVEWEDRDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTIEEGLHDLEHPDVSLADEWSYCNTDLHPEHRHLSQLEAIKLYL----KGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLE-FFQRKFWTASRQCAS---LDGKCSISCDDETVN------CYLIDNNGFILVSEDYTQTGDFFGEIEGAVMNKLL----TMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFL 942          
The following BLAST results are available for this feature:
BLAST of TCONS_00063923 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D32.203e-2225.00Voltage-dependent calcium channel subunit alpha-2/... [more]
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