TCONS_00063906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063906
Unique NameTCONS_00063906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3705

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063906 ID=TCONS_00063906|Name=TCONS_00063906|organism=Clytia hemisphaerica|type=transcript|length=3705bp
ccagggagaaagagtggcgccctcccctaccttcgggtagatagctatcg
aaagaggagccttcgggtcgcctccgactgcggtcgcagacttactNTAT
CACAAGAAACGACATTTGACCTAGAAAGCCGTCTACGTTCGTTATCTGAT
TTTCAATTACAATTGAGCAATAAACGTGAAAATATGCTGGCACTTTCAGA
ACGTGGTCAAACCCTTGTTCAAGATGGCCAGCTCTCATCTATGGAGGTTG
AATCCAGGCTAGGTGAAATCAAGACTGGATTGCAACGTTTTGAGCAACTC
TTGAAGATAACGGAAGAATCTTCATATAAAAATATCTCCTTCAATAAATT
GAAGCAGAAATTTTCCAGCACCATGACGTGGTTGCAAGAACAAACCAATT
TTCTCCAGTCTTTGAAACTAGACGACGTACAGAGTTTCGAAGAGGTACAA
GACGTCAAGCGGAATTTAAAAATGTTACAATCACGGGCTGGTAAACACCA
GGATATGACCAATGATTTAACGAGGATGTTTCAAAACCTCTCCACAGTTG
ATCTTCAGAAGGCTGGGTTCGAGTTGGACGAGTTAAAAGAACGGTTTGAG
TTGTTAAAATTTGAGTTGGATGAGAAATTACATGAAGTTGAAAATGCGGA
AGAAATgttcaaattatttacaaaatattgcACGttGACTGACTGGATCA
ATAAGAAGACCGAAAAATTGATGGACATTTCCAATCAACTTAACCTCAAG
CATCGAGATATAGTGATTTCAATGGAGCAAGAACTTGATGCCAAGGAATC
TCTAGTGAACACGATTTTAAAAGGAGTCGAAGAACATAGACACCATGCAT
TATTCTCGGAACAAAATCTTCGTATTCGTCCAATTCAAAATCGAGAGGGA
TTCCAACACTTAAAATCATCAGTTAAAGATTTGTTGTCTCGGTTGAGTTC
GATGACgaatgaaaaatctttagtTGACGATTTGAAAATATTAGAAGATG
CAATTGAAATAACCACTCAAAGACTTAGGAAGATAACCTTCTGTACAAGT
GATATTGAAATGAGTAAAGCTGAGCGTGATGGTATGGAGATAAAAGGTTT
ATTGTCTTCGTATGATGAACAATGGACTGAATTACTGGAACGAGCCAATG
ATATGTTGTTACCCGAAGAACTTAACTCGAAAATAGAGGAGCTGACCAGG
AAGTTGTCAGCGATACGAGAAGACATCACTGCGAAAGAAGGAGAGCTCAT
TCAAAAGAACATCCAGTACTTAGCTTTGCACAAGCGAATGGAGACAGAAG
AACTATGgttcaattcaaaacaaacgTTCATCAAGTCACATATTCCTTCA
GATTATAACAACTTGGTAAAATGGGAGGAAGAGTTCATAGGGATCAAACA
AGAATTCCACTGCAAGCGTAAACAAACCATAACGCTCGTtgaaactgttg
aaaatttgctgaaatCGATCGATTCGAAGGACTCTGCGGAATTTCATCAG
CACATTGCAATAAATGTTGGCTCATTTCGGCGGAGATTCGAAAATTTCGA
GGACGAAGTGAAATCCAGCGAAAAGGTTTTGGGTGAACTGCTAAGAGTCA
ATCAGATCATTTTACGCCTCGACGATGTACATTCACGATATGAAGAACTG
TGTGAAAAAGCACAAGATATCAGTACAGGTCAGGATTTGCAGGCCGCACA
AGTCATGTTACAAAAACACGAATTTAATAAAAGCCAACACGAATCTTACG
AGTCACGTTTTGCTGaattgaaaatggaatatttgGAAGTAAAAGAATGC
AGTTGTCTGGGTGCTTACGAAGAGCTATTGAACAGTATAACTGAAAAATT
TaatgatttacaaattttgaaatcagaaGTTCATTCTCTGATGAAGAATC
GTTCCAAGACATTGAAAACCACTTTTCAGTTCTTTCAATTTCGAAGTGAA
CTTTCTTTCCTTGATGCGTGGATACAAGGTCAAATCGACGATATAAAAAC
GGACGGCATCGGGAATACAACTGCAGAATGTGAACATCTGATCAGGGAAA
CTGAATCGTTCGCAAGAAATCTGATGGCTCGCGAAGAAAGAGTTGCACAG
TTTGGTGTGCTCTCACAAGACATGGTCAATAGCCGTCCCTTGTCTGCTAA
ACAAATAATGAAAAACACCTCCAATATTTACGAGCTGTGGAATGACGTTA
AAGATCTATTACAAACACGATTAGAAACGCTCGACCAAGGGCTTCATTCA
CATCGGTTCCGTGACAAAATCCTCGTCTTAAATCAATGGACCAATGAAAT
ACAAGCAAAATTGACCATtatcaaaattcaagatggtagCGAAGAAACGA
GACAAATACTAGAGGATATGAAGGGCCAACACGGGACAATTCTCTCAAAG
CTGGAGATTATGgaaagtgaaaaagaaagaCTTCGTTTGAACATCGAGGC
CTGTGAAGTTCTGGTTGCTCATTCAATGGAGACGCTGGCTCAAGAtttgc
gaaaattgaaaatgttgattGATTCGAAAGAGAATTTACTGAATGAAGTG
ATGGACTTTCACGATTTTAAGAAACAATTGTCAGACCTCGAGTCGTGGAT
GGAGCGCACGTCGAAACGCACGCAAGCGTACATGAACGATGTCACGGAGA
CGGTGTCACGTAAGCACGTCCACGATGAGTTATCAAGCGAAATTGAATCA
CGCCGTCAATACGTGACGGAGCTGCAGCTTAAAAAACAAAAcgattttca
ttgttttaccAAAGACAATTTAGACGTGTTAACCAACTGTTGGTGTAGTT
TTGAACGTAAGTGGCATGCTTTACAGTCACAGGTCAGAATGTTGGGTGAT
TTAGTGGAAAACACGGATGGGTTGAACCACATTCTGAATGATTTTGATGC
CATTGAAAGCTGGCTGGACgaacaagaaaagaaaatatatttggaacCTT
CGAATAAATTGAATGATTCTTTGGACGAGTCGGGTTTtgaaaatggtttt
cttgagaATGCACTTTCAAATCAAAACGAACTTGAAGAATTTTTGAAGAT
ACAAGACGAGAAAGTTCGATCAACTTGCGATAAAATAGATTCTTTTAAAA
TGGTGAAAACTGGTGACAATGATTCTACTGATATGACTTGTTCTAGTGAG
GTACAGATCATTGAAAAAGCTTTGCAGTTAGAAAACCAAGTTGAAGACAC
ACCTTCAAATGGGGGATTGGATGATTCAGAACCAAGTAACCATAGTAACG
AAATAAACAATAACGAAACAACCGGTACCGATTCACTTCGAGATATTCCA
CAGACTTCTCCTTCGAAACCAGATAAAGTTCTTATcggacttttgaaaaa
atcgaGAACTCCGAGTAACTCAAAGAAACGTGTTGTGTTTAGTACAACTC
ATGAATTCTCAGATTGTGTAACCATTCAACAATTCTCTAAACTCAATGAC
GAGTATGAACAAGAACAACATTATTTCTATgaagatgacgatgatgattA
TGATAATTATGCAGATGGTAATTATGCTAATTATGTAGACGATGACCATT
GGGAGGACGATGGTATTGTTTTCAGTGAAGAGGCGTTGTCTCCGTCATAT
TATCCCGAACCGCCCGAAGAATTCCTTCATTTATCCGATTCGGATGAGGA
TGAGGACGATGATTGTTGGGATAAGGATTATTTCATTGCAAGCACAACAA
CATCG
Run BLAST on NCBI

transcript from alignment at scaffold_404:774641..785926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063906 ID=TCONS_00063906|Name=TCONS_00063906|organism=Clytia hemisphaerica|type=transcript|length=11286bp|location=Sequence derived from alignment at scaffold_404:774641..785926+ (Clytia hemisphaerica)
ccagggagaaagagtggcgccctcccctaccttcgggtagatagctatcg
aaagaggagccttcgggtcgcctccgactgcggtcgcagacttactNTAT
CACAAGAAACGACATTTGACCTAGAAAGCCGTCTACGTTCGTTATCTGAT
TTTCAATTACAATTGAGCAATAAACGTGAAAATATGCTGGCACTTTCAGA
ACGTGGTCAAACCCTTGTTCAAGATGGCCAGCTCTCATCTATGGAGGTTG
AATCCAGGCTAGGTGAAATCAAGACTGGATTGCAACGTTTTGAGCAACTC
TTGAAGATAACGGAAGAATCTTCATATAAAAATATCTCCTTCAATGTAAG
TGATGGGAtggtcaattttttatacaCTGTAATTATGATGATGAGGATAG
TTTATGAATTGCTCTTACAATTTGTTACCGTGTACAAATTTCTCTTAAGC
TCTAAGTCTAGTACACAACGAACTGTGGTgaagtggtagagcatccggct
acggttcgcaaggttttgggttcaacccccagccgggtcataccaaataT
TCTcgaaatggtacttgatgcctctctgcttgatgctcagcaattaagag
aaggatcaagggtaagtggagaatccagggagaaagagtggcgccctccc
ctaccttcgggtagatagctatcgaaagaggagccttcgggttgcctccg
actgcggtcgcagacttacttacttactagtaCACAGACAACTAAGGttg
atgtaagattgtttttgtttttgtttgttttgtgttACGATTAACTCTGC
TAATGACAGTTTCAATCAATTTATCGAGACTCGTTCATCACAActtcttt
tccttttcattaGAAATTGAAGCAGAAATTTTCCAGCACCATGACGTGGT
TGCAAGAACAAACCAATTTTCTCCAGTCTTTGAAACTAGACGACGTACAG
AGTTTCGAAGAGGTACAAGACGTCAAGCGGAATTTAAAAATGTTACAATC
ACGGGCTGGTAAACACCAGGATATGACCAATGATTTAACGAGGATGTTTC
AAAACCTCTCCACAGTTGATCTTCAGAAGGCTGGGTTCGAGTTGGACGAG
TTAAAAGAACGGTTTGAGTTGTTAAAATTTGAGTTGGATGAGAAATTACA
TGAAGTTGAAAATGCGGAAGAAATgttcaaattatttacaaaatattgcA
CGGTAAGTGACCTTTTCTAATAAGAGAAATAGTATTTCAAAGGGATTTGT
TCCCCTGTTCTTTTCCTGCATTTCTACACATACCCTTGCACTGAATCATT
TTTTATGATTGTCGAGTAGGGCATCTGTTAACATTTTCCACTGACTTTCG
CTGTCTGCTCTGGTATATCATTGGTTTAATCGGCTTTCCAGAGAGTAAAG
TGTATGAGATATCTacatctgaaaatttttttgacactaACTTCCCTATG
TCATTTTCATCTCTGAGTGGAAGTTTCTGAAATAGGCTAATCTTAACGCA
ACGGGtgtgaatttttattttacagttGACTGACTGGATCAATAAGAAGA
CCGAAAAATTGATGGACATTTCCAATCAACTTAACCTCAAGCATCGAGAT
ATAGTGATTTCAATGGAGCAAGAACTTGATGCCAAGGAATCTCTAGTGAA
CACGATTTTAAAAGGAGTCGAAGAACATAGACACCATGCATTATTCTCGG
AACAAAATCTTCGTATTCGTCCAATTCAAAATCGAGAGGGATTCCAACAC
TTAAAATCATCAGTTAAAGATTTGTTGTCTCGGTTGAGTTCGATGACgaa
tgaaaaatctttagtTGACGATTTGAAAATATTAGAAGATGCAATTGAAA
TAACCACTCAAAGACTTAGGAAGATAACCTTCTGTACAAGTGATATTGAA
ATGAGTAAAGCTGAGCGTGATGGTATGGAGATAAAAGGTTTATTGTCTTC
GTATGATGAACAATGGACTGAATTACTGGAACGAGCCAATGATATGTTGT
TACCCGAAGAACTTAACTCGAAAATAGAGGAGCTGACCAGGAAGTATGTC
TTTACCTAAGATTTTGATTTAGATATTGAAACTTTAAAGAACTTAACAAC
CAACAGTTAAGCTCACAAGCTGCCTTCGCTGTTGAAGAATTTCTACCATA
TTGTTTTAACGTTTGCAGGTTGTCAGCGATACGAGAAGACATCACTGCGA
AAGAAGGAGAGCTCATTCAAAAGAACATCCAGTACTTAGCTTTGCACAAG
CGAATGGAGACAGAAGAACTATGgttcaattcaaaacaaacgTTCATCAA
GTCACATATTCCTTCAGATTATAACAGTGAGTAGATATCCCGAGTTTGCG
GGATGAGGGGAATGTGCAACATAAAGAACTTGAACCTTAGAGGAACTGAA
ATTGAGCAAATAAGCgaataagtttttttaaaaaggctGCACACCCGTAT
ACCATCCATTTGTCTTATTGTTGTCCATATCTAAACGTATCAGAGTTGCT
CTTGAGATCATATTCAGACTCCAGTCTAATTAAATCACCAAACAACTTTG
ATATTTGAGACAGATTGTTTAAAGTCAGGCTGGTCTGAGATTCATACATG
TAATTTAAGGGACGAAAATTTTacgaaaaaaagtcaaattcaGAAATATC
AATAAATATAGTATTTCTACTGTAAATCTGTAGCTTTAAAATTTACAGTA
CCAAAACAACTTTAAAGGTTGTGATAAATATGAATACCTATTTAGACCGT
AAAACTGGTCAGAGCTAAATGAAAGTTAATAATNTGATAAATATGAATAC
CAATTTAGACCGTAAAACTGGTCAGAGCTAAATGAAAGTTAATAATTTGA
GTTGAATAATCGCTTTATACAATGTAAAAATACCCTAATACAAATGATCA
GAAGATTCCCACTGAcaattaaatgaaaacaaattgcTCTATAGATGCTT
TATCAGGATGGTAATTTTTACACATTTAGTCCCAACATTTAATACCACTA
AAATGACTCCAATATCCAAAAAGACCCTTATTGAGATATTTGTCATCAAA
TAAAGTGTCATGCATGAAGCCAATATCACGTGGACCAACTCGTCCCACCA
GAAATAACAGAAGTATGAAACACATGCCCTGGACTTAGTCGTAGTTTCCT
GTTCTGTCTGCATCCATTCTAGCGCAATCTTTTATAAGGAAAAAACATAC
GAAAAAAGTCACTTTGCACCTGGTCCTTTTGAGTCTTTGCATACGAAAAA
TTAGGTCAGGATGTCTTGTAGGTCAGGAGGTCTTGTAGGTCAGGGACAAA
TGAATTATGTAATTGCAAGGATACAATTGTAAAACAATGGCTTGGTACAT
ATTTCAAAATAGCTCCATGTACGAcaattttctaatttctaaATCTAGGA
CCTTAGAAAGCTAACTTAAAATTTCACTCATTTGAGCCTAATGCCGTTAT
CCAAATTAGAAAATCGGCATCTCAAATTTGTAAAAGAGTCTATCGTTCCT
CGTTACATGGGAAGTTTCATTCAGAATAAATTGGGTCGGTTTTTTCCCTG
AACAGTTCGTTCAGTGCTGAGACTGTCAGTTTTAAAATCTGGTTAAAATG
GACATTCACATGTACCTTTCATAAGGACACCCAACATTTTGAAACCTTTT
GCCCGTTCTTATCTTTCGGAGTATGTATTgagcctgaaaatgttattaaa
atgttctcgttttcatcatttgtgagcatttgtgtgaaatttccaaaata
ttgGGTATTTTAgacaaatctttaaaatattctccacttatttaaaaaaa
aatgcataCCCTTGTTGTTCACATACCCATTACCTTTTAGACTTGGTAAA
ATGGGAGGAAGAGTTCATAGGGATCAAACAAGAATTCCACTGCAAGCGTA
AACAAACCATAACGCTCGTtgaaactgttgaaaatttgctgaaatCGATC
GATTCGAAGGACTCTGCGGAATTTCATCAGCACATTGCAATAAATGTTGG
CTCATTTCGGCGGAGATTCGAAAATTTCGAGGACGAAGTGAAATCCAGCG
AAAAGGTTTTGGGTGAACTGCTAAGAGTCAATCAGGTAATGAATTGAAAT
GtcgatttaaaatttattattactTTTACCTTCCTCGATTTTGTAggtca
aaaatgataatttcttTTTCGTCACCTCTGCCGTCTTCAAAACGGTAGAT
ACACAAACTTTCTGGTGGTGGTGAATTAACGTCCCAAGGACACTTTATAA
GGTCGAGTCTCAAAAACCGAAAAATTATTTCTCATCTGTGACAAGCCTCT
TGGTACAGGTGCCCACTAACCTTGATAGGGCCCACTAATTGATTAGTGGG
CTATACCATATTCTATCGCGCGATAATGATTTACATTCACTTATTAGATC
ATTTTACGCCTCGACGATGTACATTCACGATATGAAGAACTGTGTGAAAA
AGCACAAGATATCAGTACAGGTCAGGATTTGCAGGCCGCACAAGTCATGT
TACAAAAACACGAATTTAATAAAAGCCAACACGAATCTTACGAGTCACGT
TTTGCTGaattgaaaatggaatatttgGAAGTAAAAGAATGCAGTTGTCT
GGGTGCTTACGAAGAGCTATTGAACAGTATAACTGAAAAATTTGTAAGAT
TGCCATAGTCTTTTCTATTTGTAAAAATCTTTTAGGTTTCTTGAAactct
ttgaattttttcagatAACGATATTTTGAAATCAGGAGTAGCTCGTTTGG
TTCCTAATAGAGGAAGACAATTTCTATTAAACTTTTACTTTTCAAACCGC
CTTTAAACGGTCATTCATTTTATCACCAGACTCGACAAGaaggacaaatt
tcttttatttttctagaatgatttacaaattttgaaatcagaaGTTCATT
CTCTGATGAAGAATCGTTCCAAGACATTGAAAACCACTTTTCAGTTCTTT
CAATTTCGAAGTGAACTTTCTTTCCTTGATGCGTGGATACAAGGTCAAAT
CGACGATATAAAAACGGACGGTATGTACTCCTACATGTAAGATCTAAATT
TTAACACATTTCGATCGAGATGACCATGGTAACTTTGGTGCTAAAAAAAC
TTCTTTTCAACGGCAACGTATCTTGGGAGCCCCTTTAATAGTGCAGTCTA
AATGTGCCAAAAGTCATTAACATTGTGCACAAAGGCGTACAAGCACGAGA
CTTTGCACAAttgtagtttaggggtcaaaaatggatttaaatctcaaacc
caaaaaattggcacctgtttgtgtattctACAAACCATAAACGTCTTTGG
GTGGTCCTGgagtttttgctgacgtcagcaatcaCGTCATTTTTCTGCAT
TGTTCAAAAAGCCTTCCgcaataactttttttagcttcattttcagatat
gggttgtaatgtttttctaaacgagcatgaaaaatgctttccaacggtat
gtaaTATGAcatatttttggagaaaaaaaaaattcattttagcctgggaa
cCTGTTCTGGTTCTGAGATTTAAATCtatttttgacccctaaactacaaT
TGCGCAAAGTCTCATGCTTGTACGCCTTTGTGCACAATTTTTACACAATT
AGACCGTACTATAAGGGCAATCCATAACCATAgtgtcccccccccctttt
ttaaagtGGGGGGtagttttttcagaaaatggggAAAGGGTGggcaaaat
tgttttcaaaattctagGGGAAGCAATCAAAAGGAGGGGGagaaaaaatc
tgaggaaaaaatGTCTGTTCTCTGGTGTCaaacataaaacataaaatata
tttGTTTAGCTTCAAGCTAAAAACATGTAATAGTGTTTTATATTCGAGGT
GGTGacaatttacattttttctttgtatatgGGGATGAGATAACATGAAT
AGAAGCAGTATTATGTTATGAGCAAAAAATCACAACAAATTTCAAGGGGG
GGGgattattttaaaaaccttaggGAGGGGAACTAAAAGGGGGGCAGagg
gatttttttcaattttcaagggagGGGAACCAACCTACTAGGACACTATG
ATAACCCCCACCCCcctaaacataaaaaaattgtacagtTATATCCTGGC
CTTCTATTAAGTGCTTTATATAAAGAAAGCAAAGAAATAAGTAATAATTT
ACATGTGCTTCCCGATTTTAATCGGTAGGCATCGGGAATACAACTGCAGA
ATGTGAACATCTGATCAGGGAAACTGAATCGTTCGCAAGAAATCTGATGG
CTCGCGAAGAAAGAGTTGCACAGTTTGGTGTGCTCTCACAAGACATGGTC
AATAGCCGTCCCTTGTCTGCTAAAGTAAGTAACCTTCCACCTTTAGTGTA
GAGAACAGCACTAATAATTTGAAACAATGATTTTCCCTATTGAAAGACAA
AACTGACTGAATTCCGTTAACTACGTATAATGAGTTGTAACAGAATTTGT
TATTTCTAGTTATGACCACATATAGGCTTTGTACTTTAAAACTATATGTA
CCAATGGTTTGAACCTTCCCCTCTTTTGTTTTCGAAGTGTGTagtcaaga
aaaattagctgtAAAAGGGAATTCTACCATTTATTTACTCCCATACCTAG
CTCCTATAGAGCTATACTACCTCGTTGGCTACATCACTTAAACCTTCTTT
TTCATCCCAGCAAATAATGAAAAACACCTCCAATATTTACGAGCTGTGGA
ATGACGTTAAAGATCTATTACAAACACGATTAGAAACGCTCGACCAAGGG
CTTCATTCACATCGGTTCCGTGACAAAATCCTCGTCTTAAATCAATGGAC
CAATGAAATACAAGCAAAATTGACCATtatcaaaattcaagatggtagCG
AAGAAACGAGACAAATACTAGAGGATATGAAGGTTAGTTGaggtttttta
taatttttgatgcAACAAGTCTCTTAAACCTTTGTGAGTTTTTCTTCTTG
GCACTTGTGGCTTATAAATTAAAAGTAATACCTGCGTTAAAAAGAAGTAT
TGGTAGTATTGGAATTGATTCTGGTTTTAGCAGATTTTTCTAATTGGTGC
CGGCTATTTATGCCTTGTTTTGGAAACTAGAATATAGCTTACAAGCCAGG
TTTGCACTCTTTTTAACATCGGAATTTATTTGGCTATCAATGAAGGCAAT
ATTTCCTCGGTCCGGTCTTGGAAAAGCCTTGCTATAATTTTCAGGGTACG
GTGCTGTTCTAGTTTCAAAATATCCATTATCTGACTAGTTCATCAGTCAT
TGCCGTTCTCTGAAACACTCACAATCTTGTAACTCTTATAAAGGAGCTTG
TccgtaaaatattttcaaccttCGTTAGCTTTTGATTTAAGTCAATTTCC
AGGCAAACTTTTTCACTGCCCTGATTATAGTCAATTCATTGGAGTTGCAG
TTCAATGTAATTGTTAAAGAAAGGCTCATTTTTAAACACATTCATGCTTT
TTTATATagtctttataagaataccagGATGAAAACCAACCAAATCGTAC
CAAATCGTAAGAGCATTAATATCATGATAATACGTTAGTGTATTATGTGA
TTAAttaatagaactagaactagtaTGTCCAGGGTGAGAATTTTCAAATT
GTTAAGAATAAAGGGAGAGTAAAAACAAGCATAATTCTAACAGGAGATAC
ATTAACATTAATTAACAAAAATGTATTCTCGAATGAACGTTTTCAATCCT
AGAAACAGGTTGAAAATTGTGTTTGGACAAATTCCTAAAGAGTATTCCAT
CCTCAGACAAAAaacattattcttataaaaaatatttgtataAGATGAAT
TAAATGCTTACGTAAGCTCAATCGACTTATCGATTCAATAATAAATGATG
TAATCATAAAAGAGAATACAAAATTTACATCTTATTTGTCATGCTGAGTC
GACCAGTTTTAACAAGAGAGTCtaatttttctcagattttttgATGAGTC
AGTAATAATTAGTTCAAAAATTTCTGTCTGATGCAAGAACTGACAGAACA
GCCATCAGCCTAGGGTATGTTTACGTAGGATATTATAGAGTGTTGGAATA
AGTACCTTCCGTGTCTTtgtatttgaaaatgttataaaaagtgTTCAGTG
AGTCGGCGGAGTTAAATATTTGACTGAAAGAGCATATACAAGTAACAAGA
GAGGATCGGTTAAGACAAGGAACTAATATTGAGAGATTCTTGATTTACAT
TATTTGAAAGAGAAGAAATTAAATATTGACCTTCATAGCTATGAAGACTG
ACAAGGTTTTGGTTTGCAATTTGAATGTTATTGGTATTGGAGATATAAGA
TATAAGATAAAAAGCTAAATAGTATTTTGAGAGGAAATGACTATTTTTAC
TAATGCCCTACCTAATTCTTTTTCCAACGTAATTACAtgattttcttcaa
tctttacatTTAGAAATTAGTCTAGTAGACTCCGGTcatctttttcattt
attatgACAAAGAGCACTTAAGACTGACTTTGGACAGTACTGTAAGTGAC
GGttgcttttattttctttattcgtTACAGGGCCAACACGGGACAATTCT
CTCAAAGCTGGAGATTATGgaaagtgaaaaagaaagaCTTCGTTTGAACA
TCGAGGCCTGTGAAGTTCTGGTTGCTCATTCAATGGAGACGCTGGCTCAA
GAtttgcgaaaattgaaaatgttgattGATTCGAAAGAGAATTTACTGAA
TGAAGTGATGGACTTTCACGATTTTAAGAAACAATTGTCAGACCTCGAGT
AAGTGTATTTCTATGATGTGCGACAGGCTTTGCTTTCTGAATAAATTCGA
TTCGACATCAAGTTTTTGACaagaaaatattcttcatgcaGAAATTAAAG
AAGTCTCTTTCGGTGACCTTTTTTACCCTTGAGGCTTTGGAGTGACTATT
CTCTCTCACTTTCCGACGGTTCGAAACTCTCTTATAGTAAAGAACTGGGG
TGTCTCGAAGATTTTTTCTCCGCATTCGGGAGTTTATCGGGAAACAGGAT
AAGTAGTGAAAATGCTCTTCTGGTTGTTGTTCTATTCTCCTTCTGGCGAT
AACAACTTTTATCGTGTCTCTTCGACATGAAAGTGTTCCGACCATTTCTT
TAATGTTAAGACCTATTTTATGGACATTGTGAAATAGAATTCAATTTTCC
CTCTATAAGACGCCCTTAAAAGAACTTCCAGATAAACTGTTTGCGCTACT
ATCGAAAACTATTAAAAGAGATCTCTAGTCGCGGTGAGTCTCTAATAGGA
AgcaattgaaaagaaaaagtagaGATCAAATAGAGAAGAAGATGTTGTAA
AGAGTAGCTGTAAAATCGATTAAGACTTTACAACTAACTTCCTTCAGAAA
AAGTTGAATCCCAAAGTTAGTTAGCCTCGTAACAATATTTTTGGTGATTT
TCGAGAAGAAAATGCAATCTTTTCGCTCCAAGATTTCTTTTTATCATCTC
GTTTTCCGATTGGTCCATTTTTGTAGGTCGTGGATGGAGCGCACGTCGAA
ACGCACGCAAGCGTACATGAACGATGTCACGGAGACGGTGTCACGTAAGC
ACGTCCACGATGAGTTATCAAGCGAAATTGAATCACGCCGTCAATACGTG
ACGGAGCTGCAGCTTAAAAAACAAAAcgattttcattgttttaccAAAGA
CAATTTAGACGTGTTAACCAACTGTTGGTGTAGTTTTGAACGTAAGTGGC
ATGCTTTACAGTCACAGGTCAGAATGTTGGGTGATTTAGTGGAAAACACG
GATGGGTTGAACCACATTCTGAATGATTTTGATGCCATTGAAAGCTGGCT
GGACgaacaagaaaagaaaatatatttggaacCTTCGAATAAATTGAATG
ATTCTTTGGACGAGTCGGGTTTtgaaaatggttttcttgagaATGCACTT
TCAAATCAAAACGAACTTGAAGAATTTTTGAAGATACAAGACGAGAAAGT
TCGATCAACTTGCGATAAAATAGATTCTTTTAAAATGGTGAAAACTGGTG
ACAATGATTCTACTGATATGACTTGTTCTAGTGAGGTACAGATCATTGAA
AAAGCTTTGCAGTTAGAAAACCAAGTTGAAGACACACCTTCAAATGGGGG
ATTGGATGATTCAGAACCAAGTAACCATAGTAACGAAATAAACAATAACG
AAACAACCGGTACCGATTCACTTCGAGATATTCCACAGACTTCTCCTTCG
AAACCAGATAAAGTTCTTATcggacttttgaaaaaatcgaGAACTCCGAG
TAACTCAAAGAAACGTGTTGTGTTTAGTACAACTCATGAATTCTCAGATT
GTGTAACCATTCAACAATTCTCTAAACTCAATGACGAGTATGAACAAGAA
CAACATTATTTCTATgaagatgacgatgatgattATGATAATTATGCAGA
TGGTAATTATGCTAATTATGTAGACGATGACCATTGGGAGGACGATGGTA
TTGTTTTCAGTGAAGAGGCGTTGTCTCCGTCATATTATCCCGAACCGCCC
GAAGAATTCCTTCATTTATCCGATTCGGATGAGGATGAGGACGATGGTGA
GTCATTCTACGGTGGTAGCTCTCCTACAAAACTTAACTGTTTTTTATCAC
TAGGATGCAATCGAAGCTATAGAATAGATTTTACTTAATCCAGCGTTTCA
TTTTTCACCCAAAAGATTCCTCCTCAACCCTTTAAATATTTCCATGTGAT
ACTTTaattgtagaaattttagcgagactaattttagcgtatattagcga
gtcaggaaaatcttgattttttttggatttattttagcgaatcacgattg
caaaaaaattcgtgtagataaattttagcgaatactcgtgttacattatt
gactgaattcaTTTTCTAGCatatttctttgcactgaaaccctttctatt
gataaaaatgtatcaaagtaatataaccagaaattttagcggtctgtcga
ttcggcgtgttttagcgaaaatagggaaagctcgctaaaacgctaaaatt
agtctcgctaaaatttctacgattaaagtaatagTAATTTTGATGCGTTC
ATAAATTTTCTTCACTCTCCTTACCTTACCTATGTGTCTGGACACTGGTA
AAAGGTTAAGTGCCAGTATTATCTTAAATATTCCAGGATGAAAAAATCTT
CCAAAAGTTAGCTTAGGGAGCAGAGTAATTTATTGACCGACACTGACAGA
TTTTGACACTAAattgctagattttctttttcttttccataGATTGTTGG
GATAAGGATTATTTCATTGCAAGCACAACAACATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040058XLOC_040058Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063906-exon-scaffold_404-1491911889:774641..774985TCONS_00063906-exon-scaffold_404-1491911889:774641..774985Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:774641..774985TCONS_00063906-exon-scaffold_404-1510915933:774641..774985Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:774641..774985TCONS_00063906-exon-scaffold_404-1575043694:774641..774985Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:775504..775842TCONS_00063906-exon-scaffold_404-1491911889:775504..775842Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:775504..775842TCONS_00063906-exon-scaffold_404-1510915933:775504..775842Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:775504..775842TCONS_00063906-exon-scaffold_404-1575043694:775504..775842Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:776166..776683TCONS_00063906-exon-scaffold_404-1491911889:776166..776683Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:776166..776683TCONS_00063906-exon-scaffold_404-1510915933:776166..776683Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:776166..776683TCONS_00063906-exon-scaffold_404-1575043694:776166..776683Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:776809..776966TCONS_00063906-exon-scaffold_404-1491911889:776809..776966Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:776809..776966TCONS_00063906-exon-scaffold_404-1510915933:776809..776966Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:776809..776966TCONS_00063906-exon-scaffold_404-1575043694:776809..776966Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:778481..778725TCONS_00063906-exon-scaffold_404-1491911889:778481..778725Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:778481..778725TCONS_00063906-exon-scaffold_404-1510915933:778481..778725Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:778481..778725TCONS_00063906-exon-scaffold_404-1575043694:778481..778725Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:779038..779283TCONS_00063906-exon-scaffold_404-1491911889:779038..779283Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:779038..779283TCONS_00063906-exon-scaffold_404-1510915933:779038..779283Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:779038..779283TCONS_00063906-exon-scaffold_404-1575043694:779038..779283Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:779507..779660TCONS_00063906-exon-scaffold_404-1491911889:779507..779660Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:779507..779660TCONS_00063906-exon-scaffold_404-1510915933:779507..779660Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:779507..779660TCONS_00063906-exon-scaffold_404-1575043694:779507..779660Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:780819..780964TCONS_00063906-exon-scaffold_404-1491911889:780819..780964Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:780819..780964TCONS_00063906-exon-scaffold_404-1510915933:780819..780964Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:780819..780964TCONS_00063906-exon-scaffold_404-1575043694:780819..780964Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:781301..781522TCONS_00063906-exon-scaffold_404-1491911889:781301..781522Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:781301..781522TCONS_00063906-exon-scaffold_404-1510915933:781301..781522Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:781301..781522TCONS_00063906-exon-scaffold_404-1575043694:781301..781522Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:783171..783388TCONS_00063906-exon-scaffold_404-1491911889:783171..783388Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:783171..783388TCONS_00063906-exon-scaffold_404-1510915933:783171..783388Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:783171..783388TCONS_00063906-exon-scaffold_404-1575043694:783171..783388Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:784117..785186TCONS_00063906-exon-scaffold_404-1491911889:784117..785186Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:784117..785186TCONS_00063906-exon-scaffold_404-1510915933:784117..785186Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:784117..785186TCONS_00063906-exon-scaffold_404-1575043694:784117..785186Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1491911889:785883..785926TCONS_00063906-exon-scaffold_404-1491911889:785883..785926Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1510915933:785883..785926TCONS_00063906-exon-scaffold_404-1510915933:785883..785926Clytia hemisphaericaexon
TCONS_00063906-exon-scaffold_404-1575043694:785883..785926TCONS_00063906-exon-scaffold_404-1575043694:785883..785926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:774641..785926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.978503	0.330805	0.207209	11.0703	6.25261	4.73721	4.96323	4.23858	6.12731	6.3199	3.73635	2.75092	2.61906	1.43997	1.56367	2.90279	1.94241	4.22216	3.74648	4.26522	3.10893	0.891479	3.98063	2.17987	4.65246	1.43841	7.88009	1.52513	1.51417
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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