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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063838 ID=TCONS_00063838|Name=TCONS_00063838|organism=Clytia hemisphaerica|type=transcript|length=1160bp
CGTGTTAAAAGACTCAAAACTACACGTTCACTATATACATAAATGTAAGC
TCGATTAAAGCACTTGACAAATTTCAGTGACTTTTCTTGATCTACCTATA
AACTTTACAGGAGTGTTTGATGCTAGCAAAATATTGTTTACAGTTAGCAA
ATTTCAGTAACAGTTCTTGATCTACGTTTATATTTAACAGAAATGTTAGA
TGCACGCAAAGTCTTTTGCTTCACATCTTCCAAGTCACTTTGATCGGCAC
CAATTCGTTCAAGCAGGTTGACAAATAGGTCTAGGGGGAAAATTAAGGTT
ACGTTCTCACCTCCAATTTTAAACATCAGCTTGACGTCAAAAAACTTCTC
CCTAAGAAGCACCTCAATTGGACATTTGTTGTACTGCCCGTAAATCCCTG
TTTGTATCAGCTGGAAGTTACACACAGGGCAATAATAGTTCGTTTCAAGT
TTATTTATTCCAACGGCAGGGAAACTTGCAACAAGTTGATCTTCTGTGTC
GTTAAAACCAGAAACATCAGTCAAATCCACATATGATTCATCTGAGCTGG
TGACTTCGGTGTGAGCAGTAGACGTTAGGTATTTCCCATCATAGGTTTTC
ACTCTCAGTTCTTTGAAACGGTAAGAACCTTTAGCAGCAATTTTAGATAT
GTGGTTTCCCCATAAAACCAATTTCACTGATTCAGTGACAGAATCATCTT
GAATGCGGACATTGAGTCGTTGCTTACGTCCAAATTGGGTGTTAACCTCT
GCAGGATCTTCTGTTAAGTCAACATGACACGCTACATTGATTATTGCTTC
ATCGGGTAATTTGTCCAAATCATTCAACTTAGTGAAATCATTGACAGTTT
GTAGTTTTTGCTCAACCAACTCAAAGGGAATGTTCTTGTCTGATATTTCT
GCATGAGAATTGTTACCAAGTTTAAATTTTAGGGAATTTCTAAATTTATC
ATTCTCAACCGTAAACTGAGTAATCTTTATTGGCCGATCTTTAAGCTTTG
CCGATTGGAAGGCTTGGTGTAGGTCAGTCTTGTAGCAAACGATGTTCTTT
TCCCTGACTCCATCATCAATCAAGGCATTAAAGTATCTGATTTTAGAGGG
AGATGTTGCTACATCGAAAAGTTTTATCACGTATCCATGCTGCTCATTTC
CATCATCtag Run BLAST on NCBI protein sequence of TCONS_00063838-protein >TCONS_00063838-protein ID=TCONS_00063838-protein|Name=TCONS_00063838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
LDDGNEQHGYVIKLFDVATSPSKIRYFNALIDDGVREKNIVCYKTDLHQA
FQSAKLKDRPIKITQFTVENDKFRNSLKFKLGNNSHAEISDKNIPFELVE
QKLQTVNDFTKLNDLDKLPDEAIINVACHVDLTEDPAEVNTQFGRKQRLN
VRIQDDSVTESVKLVLWGNHISKIAAKGSYRFKELRVKTYDGKYLTSTAH
TEVTSSDESYVDLTDVSGFNDTEDQLVASFPAVGINKLETNYYCPVCNFQ
LIQTGIYGQYNKCPIEVLLREKFFDVKLMFKIGGENVTLIFPLDLFVNLL
ERIGADQSDLEDVKQKTLRASNISVKYKRRSRTVTEIC Run BLAST on NCBI transcript from alignment at scaffold_403:45475..46634 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063838 ID=TCONS_00063838|Name=TCONS_00063838|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at scaffold_403:45475..46634 (Clytia hemisphaerica)
ctaGATGATGGAAATGAGCAGCATGGATACGTGATAAAACTTTTCGATGT
AGCAACATCTCCCTCTAAAATCAGATACTTTAATGCCTTGATTGATGATG
GAGTCAGGGAAAAGAACATCGTTTGCTACAAGACTGACCTACACCAAGCC
TTCCAATCGGCAAAGCTTAAAGATCGGCCAATAAAGATTACTCAGTTTAC
GGTTGAGAATGATAAATTTAGAAATTCCCTAAAATTTAAACTTGGTAACA
ATTCTCATGCAGAAATATCAGACAAGAACATTCCCTTTGAGTTGGTTGAG
CAAAAACTACAAACTGTCAATGATTTCACTAAGTTGAATGATTTGGACAA
ATTACCCGATGAAGCAATAATCAATGTAGCGTGTCATGTTGACTTAACAG
AAGATCCTGCAGAGGTTAACACCCAATTTGGACGTAAGCAACGACTCAAT
GTCCGCATTCAAGATGATTCTGTCACTGAATCAGTGAAATTGGTTTTATG
GGGAAACCACATATCTAAAATTGCTGCTAAAGGTTCTTACCGTTTCAAAG
AACTGAGAGTGAAAACCTATGATGGGAAATACCTAACGTCTACTGCTCAC
ACCGAAGTCACCAGCTCAGATGAATCATATGTGGATTTGACTGATGTTTC
TGGTTTTAACGACACAGAAGATCAACTTGTTGCAAGTTTCCCTGCCGTTG
GAATAAATAAACTTGAAACGAACTATTATTGCCCTGTGTGTAACTTCCAG
CTGATACAAACAGGGATTTACGGGCAGTACAACAAATGTCCAATTGAGGT
GCTTCTTAGGGAGAAGTTTTTTGACGTCAAGCTGATGTTTAAAATTGGAG
GTGAGAACGTAACCTTAATTTTCCCCCTAGACCTATTTGTCAACCTGCTT
GAACGAATTGGTGCCGATCAAAGTGACTTGGAAGATGTGAAGCAAAAGAC
TTTGCGTGCATCTAACATTTCTGTTAAATATAAACGTAGATCAAGAACTG
TTACTGAAATTTGCTAACTGTAAACAATATTTTGCTAGCATCAAACACTC
CTGTAAAGTTTATAGGTAGATCAAGAAAAGTCACTGAAATTTGTCAAGTG
CTTTAATCGAGCTTACATTTATGTATATAGTGAACGTGTAGTTTTGAGTC
TTTTAACACG Coding sequence (CDS) from alignment at scaffold_403:45475..46634 >TCONS_00063838 ID=TCONS_00063838|Name=TCONS_00063838|organism=Clytia hemisphaerica|type=CDS|length=1017bp|location=Sequence derived from alignment at scaffold_403:45475..46634 (Clytia hemisphaerica)
ctaGATGATGGAAATGAGCAGCATGGATACGTGATAAAACTTTTCGATGT
AGCAACATCTCCCTCTAAAATCAGATACTTTAATGCCTTGATTGATGATG
GAGTCAGGGAAAAGAACATCGTTTGCTACAAGACTGACCTACACCAAGCC
TTCCAATCGGCAAAGCTTAAAGATCGGCCAATAAAGATTACTCAGTTTAC
GGTTGAGAATGATAAATTTAGAAATTCCCTAAAATTTAAACTTGGTAACA
ATTCTCATGCAGAAATATCAGACAAGAACATTCCCTTTGAGTTGGTTGAG
CAAAAACTACAAACTGTCAATGATTTCACTAAGTTGAATGATTTGGACAA
ATTACCCGATGAAGCAATAATCAATGTAGCGTGTCATGTTGACTTAACAG
AAGATCCTGCAGAGGTTAACACCCAATTTGGACGTAAGCAACGACTCAAT
GTCCGCATTCAAGATGATTCTGTCACTGAATCAGTGAAATTGGTTTTATG
GGGAAACCACATATCTAAAATTGCTGCTAAAGGTTCTTACCGTTTCAAAG
AACTGAGAGTGAAAACCTATGATGGGAAATACCTAACGTCTACTGCTCAC
ACCGAAGTCACCAGCTCAGATGAATCATATGTGGATTTGACTGATGTTTC
TGGTTTTAACGACACAGAAGATCAACTTGTTGCAAGTTTCCCTGCCGTTG
GAATAAATAAACTTGAAACGAACTATTATTGCCCTGTGTGTAACTTCCAG
CTGATACAAACAGGGATTTACGGGCAGTACAACAAATGTCCAATTGAGGT
GCTTCTTAGGGAGAAGTTTTTTGACGTCAAGCTGATGTTTAAAATTGGAG
GTGAGAACGTAACCTTAATTTTCCCCCTAGACCTATTTGTCAACCTGCTT
GAACGAATTGGTGCCGATCAAAGTGACTTGGAAGATGTGAAGCAAAAGAC
TTTGCGTGCATCTAACATTTCTGTTAAATATAAACGTAGATCAAGAACTG
TTACTGAAATTTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063838-exon-scaffold_403-1491911889:45475..46634 | TCONS_00063838-exon-scaffold_403-1491911889:45475..46634 | Clytia hemisphaerica | exon |
| TCONS_00063838-exon-scaffold_403-1510915933:45475..46634 | TCONS_00063838-exon-scaffold_403-1510915933:45475..46634 | Clytia hemisphaerica | exon |
| TCONS_00063838-exon-scaffold_403-1575043694:45475..46634 | TCONS_00063838-exon-scaffold_403-1575043694:45475..46634 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_403 | supercontig | scaffold_403:45475..46634 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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