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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063814 ID=TCONS_00063814|Name=TCONS_00063814|organism=Clytia hemisphaerica|type=transcript|length=1776bp
CGAGAATTTATTTCGattaataaaaaatatgaaatatataaaagctttgt
taaaaacaatagaaaaagaatgaagtccATTTAGAATTCAAAGTCGTCCA
GAACGAGATCAGTAGTAGAATTGACCTCTGCGATACAAGAAAATTCATTA
TCAAATTGATCTTTTGTTGTAGTATCTTGTCCATCTAACAACATATTTGA
AACGTCGAAAAAGGCGTTCTTAAGAACGTTAACAACAACTTGTTTTGCAG
CATCATCAATATTTTCATCTGCAAGTGGTAACTCAAATGTTTCTGATGGT
TCAGAAGTTAATTGAGATTCTCCATCCATGCTTTCATAGCTAGCGTTGTT
GGTATTTGGAGTAGACTCGTACGACTCGGTGGCTTCGAGACTGTGTGCTG
AACCAACGGGGATCGACGAAGCAAGCTCTTTATAATCGTTTGGTTCCAGA
GAGTTTGTTACAGATGGAACAGCCATCTCTCCCATTTCGGAAGGAGTCCC
TTCGTTTAAACTCGCAGACACGATCCCGAGATTTTCTTTACCGAGCGGCA
TTTCAGCTTGACTTGGAAAATCAATACACGAATCATTTTGCAACTTTGTA
AAATCAGATTGTCCAAGAACTTTCTTATTAATGGTCGATCGTTCGCTGTG
CACCGCTTTGTTGTCATAAGAAGCCGTACCAAGGATAGCGTTGGCTTCTG
AAAAAGTTAATTGGTTATTGACATCATTAAGGGACGCTGAATGGACGTCT
TCCGGCTGTTAATGTATCACGAGTAGATTGAGCGTCAGCCTGGACATGCT
TGAACTTGGGCTGTTCTGGTTCATCAGCTACATCAGCACATTTATCGATT
GCAATATTCGAATCCGTCCCTACAGATTTACAGTGGTCACATTTATTTTC
GATACATTTCAAAGTACCACGTTCATTTTGAAAACCGTTAGCCAAAGCTA
AGACATCTCTCAAACCACTAAAATCGAAAGGTTCGTCGTGAGAGCTCCCA
TTGCATTTAGGTTGACAGTCATGTTTAATGTCGGTCATTGCATTATCAAC
ATCCGTTGCCGATTCTGCATCTTCTATGTTATACCCATAACCTTGAGATA
AACGTAGAACTTCGAAAAGGGAAGACATTTCCGATTCGGATATCTTCTCA
CCGTTTTTCTTGTCACAGGTTGAATCAGCTTCAAGGGGGGTTTGAGGGGC
GGTTTGAGGGGCGGGCGATTTAGGTTTGACCTGATATCCATAGCCCTCGG
AGCTTCGAAGGACGTCAAGAAGTTCATTCACGTCAGCCTTTgacattttt
gtttcattttcgtACTTAGAATTATCGTATGCACTTCCATTGTTCTTAGA
ACCGGCGGGGTCAGAGTCATCGCTGACTGTGTCGTAACCAAAACCTTCGG
AAAGTTTTAGCGCTTCACAAAGATCCTTTAAGTCTTGTTGTACAGCACCA
TTTGGAGCATTGTCAGTTTCTCCCAGAGCAGTTGGATTGTCGTTAACCTT
CTCTTTCATCGGTTTGTCACTAACATCGGAAGATTCCATTTCAGTCTGAG
GGCGGGCAGATGATGGTAAATCTTTAGAATCCGATATTTCAAGAACATCC
GGGGACACCAAAGGAGAAGGATTAATCGATTCAAGGTGATCTTGTGGTTG
ACTTGAATCAAACTTGAGCTTCTTAGTTGTTTTCTTCCGTGAGAAGCTGA
TCTCAACGACAAGTTTCTTGGGAGCGGGTTTTGTTGATTCACCTATGGAA
GGCATATTCCTAATGTTGTTACCCAC Run BLAST on NCBI protein sequence of TCONS_00063814-protein >TCONS_00063814-protein ID=TCONS_00063814-protein|Name=TCONS_00063814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
VGNNIRNMPSIGESTKPAPKKLVVEISFSRKKTTKKLKFDSSQPQDHLES
INPSPLVSPDVLEISDSKDLPSSARPQTEMESSDVSDKPMKEKVNDNPTA
LGETDNAPNGAVQQDLKDLCEALKLSEGFGYDTVSDDSDPAGSKNNGSAY
DNSKYENETKMSKADVNELLDVLRSSEGYGYQVKPKSPAPQTAPQTPLEA
DSTCDKKNGEKISESEMSSLFEVLRLSQGYGYNIEDAESATDVDNAMTDI
KHDCQPKCNGSSHDEPFDFSGLRDVLALANGFQNERGTLKCIENKCDHCK
SVGTDSNIAIDKCADVADEPEQPKFKHVQADAQSTRDTLTAGRRPFSVP Run BLAST on NCBI transcript from alignment at scaffold_400:180063..181838 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063814 ID=TCONS_00063814|Name=TCONS_00063814|organism=Clytia hemisphaerica|type=transcript|length=1776bp|location=Sequence derived from alignment at scaffold_400:180063..181838 (Clytia hemisphaerica)
GTGGGTAACAACATTAGGAATATGCCTTCCATAGGTGAATCAACAAAACC
CGCTCCCAAGAAACTTGTCGTTGAGATCAGCTTCTCACGGAAGAAAACAA
CTAAGAAGCTCAAGTTTGATTCAAGTCAACCACAAGATCACCTTGAATCG
ATTAATCCTTCTCCTTTGGTGTCCCCGGATGTTCTTGAAATATCGGATTC
TAAAGATTTACCATCATCTGCCCGCCCTCAGACTGAAATGGAATCTTCCG
ATGTTAGTGACAAACCGATGAAAGAGAAGGTTAACGACAATCCAACTGCT
CTGGGAGAAACTGACAATGCTCCAAATGGTGCTGTACAACAAGACTTAAA
GGATCTTTGTGAAGCGCTAAAACTTTCCGAAGGTTTTGGTTACGACACAG
TCAGCGATGACTCTGACCCCGCCGGTTCTAAGAACAATGGAAGTGCATAC
GATAATTCTAAGTacgaaaatgaaacaaaaatgtcAAAGGCTGACGTGAA
TGAACTTCTTGACGTCCTTCGAAGCTCCGAGGGCTATGGATATCAGGTCA
AACCTAAATCGCCCGCCCCTCAAACCGCCCCTCAAACCCCCCTTGAAGCT
GATTCAACCTGTGACAAGAAAAACGGTGAGAAGATATCCGAATCGGAAAT
GTCTTCCCTTTTCGAAGTTCTACGTTTATCTCAAGGTTATGGGTATAACA
TAGAAGATGCAGAATCGGCAACGGATGTTGATAATGCAATGACCGACATT
AAACATGACTGTCAACCTAAATGCAATGGGAGCTCTCACGACGAACCTTT
CGATTTTAGTGGTTTGAGAGATGTCTTAGCTTTGGCTAACGGTTTTCAAA
ATGAACGTGGTACTTTGAAATGTATCGAAAATAAATGTGACCACTGTAAA
TCTGTAGGGACGGATTCGAATATTGCAATCGATAAATGTGCTGATGTAGC
TGATGAACCAGAACAGCCCAAGTTCAAGCATGTCCAGGCTGACGCTCAAT
CTACTCGTGATACATTAACAGCCGGAAGACGTCCATTCAGCGTCCCTTAA
TGATGTCAATAACCAATTAACTTTTTCAGAAGCCAACGCTATCCTTGGTA
CGGCTTCTTATGACAACAAAGCGGTGCACAGCGAACGATCGACCATTAAT
AAGAAAGTTCTTGGACAATCTGATTTTACAAAGTTGCAAAATGATTCGTG
TATTGATTTTCCAAGTCAAGCTGAAATGCCGCTCGGTAAAGAAAATCTCG
GGATCGTGTCTGCGAGTTTAAACGAAGGGACTCCTTCCGAAATGGGAGAG
ATGGCTGTTCCATCTGTAACAAACTCTCTGGAACCAAACGATTATAAAGA
GCTTGCTTCGTCGATCCCCGTTGGTTCAGCACACAGTCTCGAAGCCACCG
AGTCGTACGAGTCTACTCCAAATACCAACAACGCTAGCTATGAAAGCATG
GATGGAGAATCTCAATTAACTTCTGAACCATCAGAAACATTTGAGTTACC
ACTTGCAGATGAAAATATTGATGATGCTGCAAAACAAGTTGTTGTTAACG
TTCTTAAGAACGCCTTTTTCGACGTTTCAAATATGTTGTTAGATGGACAA
GATACTACAACAAAAGATCAATTTGATAATGAATTTTCTTGTATCGCAGA
GGTCAATTCTACTACTGATCTCGTTCTGGACGACTTTGAATTCTAAATgg
acttcattctttttctattgtttttaacaaagcttttatatatttcatat
tttttattaatCGAAATAAATTCTCG Coding sequence (CDS) from alignment at scaffold_400:180063..181838 >TCONS_00063814 ID=TCONS_00063814|Name=TCONS_00063814|organism=Clytia hemisphaerica|type=CDS|length=1050bp|location=Sequence derived from alignment at scaffold_400:180063..181838 (Clytia hemisphaerica)
GTGGGTAACAACATTAGGAATATGCCTTCCATAGGTGAATCAACAAAACC
CGCTCCCAAGAAACTTGTCGTTGAGATCAGCTTCTCACGGAAGAAAACAA
CTAAGAAGCTCAAGTTTGATTCAAGTCAACCACAAGATCACCTTGAATCG
ATTAATCCTTCTCCTTTGGTGTCCCCGGATGTTCTTGAAATATCGGATTC
TAAAGATTTACCATCATCTGCCCGCCCTCAGACTGAAATGGAATCTTCCG
ATGTTAGTGACAAACCGATGAAAGAGAAGGTTAACGACAATCCAACTGCT
CTGGGAGAAACTGACAATGCTCCAAATGGTGCTGTACAACAAGACTTAAA
GGATCTTTGTGAAGCGCTAAAACTTTCCGAAGGTTTTGGTTACGACACAG
TCAGCGATGACTCTGACCCCGCCGGTTCTAAGAACAATGGAAGTGCATAC
GATAATTCTAAGTacgaaaatgaaacaaaaatgtcAAAGGCTGACGTGAA
TGAACTTCTTGACGTCCTTCGAAGCTCCGAGGGCTATGGATATCAGGTCA
AACCTAAATCGCCCGCCCCTCAAACCGCCCCTCAAACCCCCCTTGAAGCT
GATTCAACCTGTGACAAGAAAAACGGTGAGAAGATATCCGAATCGGAAAT
GTCTTCCCTTTTCGAAGTTCTACGTTTATCTCAAGGTTATGGGTATAACA
TAGAAGATGCAGAATCGGCAACGGATGTTGATAATGCAATGACCGACATT
AAACATGACTGTCAACCTAAATGCAATGGGAGCTCTCACGACGAACCTTT
CGATTTTAGTGGTTTGAGAGATGTCTTAGCTTTGGCTAACGGTTTTCAAA
ATGAACGTGGTACTTTGAAATGTATCGAAAATAAATGTGACCACTGTAAA
TCTGTAGGGACGGATTCGAATATTGCAATCGATAAATGTGCTGATGTAGC
TGATGAACCAGAACAGCCCAAGTTCAAGCATGTCCAGGCTGACGCTCAAT
CTACTCGTGATACATTAACAGCCGGAAGACGTCCATTCAGCGTCCCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063814-exon-scaffold_400-1491911889:180063..181838 | TCONS_00063814-exon-scaffold_400-1491911889:180063..181838 | Clytia hemisphaerica | exon |
| TCONS_00063814-exon-scaffold_400-1510915933:180063..181838 | TCONS_00063814-exon-scaffold_400-1510915933:180063..181838 | Clytia hemisphaerica | exon |
| TCONS_00063814-exon-scaffold_400-1575043694:180063..181838 | TCONS_00063814-exon-scaffold_400-1575043694:180063..181838 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_400 | supercontig | scaffold_400:180063..181838 . |
Blast
The following BLAST results are available for this feature:
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